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CmoCh04G018470 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G018470
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR6-like
Genome locationCmo_Chr04:9283140..9283433
RNA-Seq ExpressionCmoCh04G018470
SyntenyCmoCh04G018470
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034281.1 hypothetical protein E6C27_scaffold65G002800 [Cucumis melo var. makuwa]2.5e-3880.41Show/hide
Query:  MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN
        MGF+FDP KWVITGIQ RPPL+      I+KE +HCD EDQPPTPTGD+CRIRSGSKCPPAPKK KSS+KFNH N+RQFFKPPDLEVVFSRHVERAN
Subjt:  MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN

KAE8648709.1 hypothetical protein Csa_009216 [Cucumis sativus]1.6e-3278.41Show/hide
Query:  MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVV
        MGF+FDP KWVITGIQ RPPL+      I+KE  HCD EDQPPTPTGD+CRI SGSKCPPAPKK KSS+KFNHGNVRQFFKPPDLE+V
Subjt:  MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVV

KAG6601529.1 Cyclin-dependent protein kinase inhibitor SMR8, partial [Cucurbita argyrosperma subsp. sororia]5.7e-5198.97Show/hide
Query:  MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN
        MGFQFDPRKWVITGIQSRPPLVPIYTN IHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN
Subjt:  MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN

XP_021654851.1 cyclin-dependent protein kinase inhibitor SMR6-like [Hevea brasiliensis]1.8e-2054.74Show/hide
Query:  GFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERA
        G + D +KWVI GI  R PL PI+TN + KE +  D      TPT DD RI +   CP APKKRK+++K N+  VR+FF PPDLE VF RHVERA
Subjt:  GFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERA

XP_022957284.1 cyclin-dependent protein kinase inhibitor SMR6-like [Cucurbita moschata]8.8e-52100Show/hide
Query:  MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN
        MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN
Subjt:  MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN

TrEMBL top hitse value%identityAlignment
A0A0A0KVI5 Uncharacterized protein7.5e-3378.41Show/hide
Query:  MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVV
        MGF+FDP KWVITGIQ RPPL+      I+KE  HCD EDQPPTPTGD+CRI SGSKCPPAPKK KSS+KFNHGNVRQFFKPPDLE+V
Subjt:  MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVV

A0A2P2IWJ2 Uncharacterized protein2.7e-2255.21Show/hide
Query:  GFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN
        G +FD +KWVI GI  R PL PIYTN + K+    ++E+   TPTG++ RI + S CPPAP+KRK+++K N+  V++FF PPDLE VF RHVERAN
Subjt:  GFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN

A0A4D6LQA8 Uncharacterized protein8.6e-2153.21Show/hide
Query:  MGFQFDP--------RKWVITGIQSRPPLVPIYTNLIHKEL---DHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNH-GNVRQFFKPPDLEVV
        MGF   P        RKWVI GI  R PL PIYT  + KE+   D  D  D   TP G++ RI +  KCPPAP+KRK S+K N+ G  R+FF PPDLE V
Subjt:  MGFQFDP--------RKWVITGIQSRPPLVPIYTNLIHKEL---DHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNH-GNVRQFFKPPDLEVV

Query:  FSRHVERAN
        F RHVERAN
Subjt:  FSRHVERAN

A0A5A7SXV2 Uncharacterized protein1.2e-3880.41Show/hide
Query:  MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN
        MGF+FDP KWVITGIQ RPPL+      I+KE +HCD EDQPPTPTGD+CRIRSGSKCPPAPKK KSS+KFNH N+RQFFKPPDLEVVFSRHVERAN
Subjt:  MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN

A0A6J1H1H9 cyclin-dependent protein kinase inhibitor SMR6-like4.2e-52100Show/hide
Query:  MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN
        MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN
Subjt:  MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN

SwissProt top hitse value%identityAlignment
Q1G3Y4 Cyclin-dependent protein kinase inhibitor SMR151.0e-1046.99Show/hide
Query:  RKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQ-PPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVF
        +K VITGI     + PI  +L    + + + ED  P TPT D  RI +   CPPAPKKRK ++K ++G  R+FF PPDLE VF
Subjt:  RKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQ-PPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVF

Q29Q81 Cyclin-dependent protein kinase inhibitor SMR66.0e-1139.39Show/hide
Query:  GFQFDPRKWVITGIQSRPPLVPIYTNL------IHKELDHCDTEDQ--PPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPP-DLEVVFSR
        G + D +KWVI GI  R  L P+ T L      + +  + C  E++    TPT  + +I    +CPPAP+KR+ ++K     VR+FF PP DLE VF R
Subjt:  GFQFDPRKWVITGIQSRPPLVPIYTNL------IHKELDHCDTEDQ--PPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPP-DLEVVFSR

Q9SAD3 Cyclin-dependent protein kinase inhibitor SMR81.3e-1044.79Show/hide
Query:  DPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQ---PPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNV-RQFFKPPDLEVVFSRHVERAN
        D +KWVI GI SR PL  I    +   +   +TE+Q   P TPT    RI     CP APKKRK S+K ++  V R +F PPDLE VF   ++RA+
Subjt:  DPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQ---PPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNV-RQFFKPPDLEVVFSRHVERAN

Arabidopsis top hitse value%identityAlignment
AT1G10690.1 unknown protein9.5e-1244.79Show/hide
Query:  DPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQ---PPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNV-RQFFKPPDLEVVFSRHVERAN
        D +KWVI GI SR PL  I    +   +   +TE+Q   P TPT    RI     CP APKKRK S+K ++  V R +F PPDLE VF   ++RA+
Subjt:  DPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQ---PPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNV-RQFFKPPDLEVVFSRHVERAN

AT1G60783.1 unknown protein7.2e-1246.99Show/hide
Query:  RKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQ-PPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVF
        +K VITGI     + PI  +L    + + + ED  P TPT D  RI +   CPPAPKKRK ++K ++G  R+FF PPDLE VF
Subjt:  RKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQ-PPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVF

AT5G40460.1 unknown protein4.2e-1239.39Show/hide
Query:  GFQFDPRKWVITGIQSRPPLVPIYTNL------IHKELDHCDTEDQ--PPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPP-DLEVVFSR
        G + D +KWVI GI  R  L P+ T L      + +  + C  E++    TPT  + +I    +CPPAP+KR+ ++K     VR+FF PP DLE VF R
Subjt:  GFQFDPRKWVITGIQSRPPLVPIYTNL------IHKELDHCDTEDQ--PPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPP-DLEVVFSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTCCAATTCGATCCCAGAAAATGGGTCATCACGGGAATTCAGTCACGACCTCCTCTTGTGCCTATTTACACGAATCTCATTCACAAAGAACTCGATCACTGTGA
CACAGAAGACCAACCGCCGACGCCGACAGGAGACGACTGTCGGATCCGGTCCGGTTCAAAATGCCCGCCCGCCCCCAAGAAGCGAAAATCTTCTATGAAATTCAACCATG
GGAATGTGAGGCAGTTCTTCAAGCCTCCGGATTTAGAGGTTGTCTTTAGTCGACATGTCGAGAGGGCTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTCCAATTCGATCCCAGAAAATGGGTCATCACGGGAATTCAGTCACGACCTCCTCTTGTGCCTATTTACACGAATCTCATTCACAAAGAACTCGATCACTGTGA
CACAGAAGACCAACCGCCGACGCCGACAGGAGACGACTGTCGGATCCGGTCCGGTTCAAAATGCCCGCCCGCCCCCAAGAAGCGAAAATCTTCTATGAAATTCAACCATG
GGAATGTGAGGCAGTTCTTCAAGCCTCCGGATTTAGAGGTTGTCTTTAGTCGACATGTCGAGAGGGCTAATTGA
Protein sequenceShow/hide protein sequence
MGFQFDPRKWVITGIQSRPPLVPIYTNLIHKELDHCDTEDQPPTPTGDDCRIRSGSKCPPAPKKRKSSMKFNHGNVRQFFKPPDLEVVFSRHVERAN