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CmoCh04G018540 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G018540
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein SON isoform X2
Genome locationCmo_Chr04:9314395..9315520
RNA-Seq ExpressionCmoCh04G018540
SyntenyCmoCh04G018540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601535.1 hypothetical protein SDJN03_06768, partial [Cucurbita argyrosperma subsp. sororia]6.9e-09100Show/hide
Query:  RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR
        RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR
Subjt:  RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR

XP_019052354.1 PREDICTED: uncharacterized protein LOC104591967 [Nelumbo nucifera]1.3e-1064.29Show/hide
Query:  LVKYYTARRAEQLSSKLFACLTHQISIMDAFISRQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPAR
        L +  T    E L  KL   LTH++S+MD FISRQVSRSPHSKHSQR+HSP SSLET+R++RSRS SP R
Subjt:  LVKYYTARRAEQLSSKLFACLTHQISIMDAFISRQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPAR

XP_022956543.1 protein SON [Cucurbita moschata]6.9e-09100Show/hide
Query:  RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR
        RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR
Subjt:  RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR

XP_022984894.1 protein SON isoform X2 [Cucurbita maxima]6.9e-09100Show/hide
Query:  RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR
        RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR
Subjt:  RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR

XP_023514642.1 uncharacterized protein LOC111778873 [Cucurbita pepo subsp. pepo]6.9e-09100Show/hide
Query:  RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR
        RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR
Subjt:  RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR

TrEMBL top hitse value%identityAlignment
A0A0A0KS75 Uncharacterized protein2.4e-0790Show/hide
Query:  RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR
        RQVSRSPHSKHSQR+HSP SSL+ TRARRSRSRSPARRRR
Subjt:  RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR

A0A1U8Q0L3 uncharacterized protein LOC1045919676.1e-1164.29Show/hide
Query:  LVKYYTARRAEQLSSKLFACLTHQISIMDAFISRQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPAR
        L +  T    E L  KL   LTH++S+MD FISRQVSRSPHSKHSQR+HSP SSLET+R++RSRS SP R
Subjt:  LVKYYTARRAEQLSSKLFACLTHQISIMDAFISRQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPAR

A0A2H5N7T2 Uncharacterized protein3.7e-0875Show/hide
Query:  SIMDAFISRQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR
        S+++ FISR V+RSPHSKHSQR+HSP SSLET+R RRSRSRSP RR+R
Subjt:  SIMDAFISRQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR

A0A6J1GX59 protein SON3.3e-09100Show/hide
Query:  RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR
        RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR
Subjt:  RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR

A0A6J1JBT4 protein SON isoform X23.3e-09100Show/hide
Query:  RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR
        RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR
Subjt:  RQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATCATCACTGCCCTGTTTTCGAGTTTATCATTTACTGCAGGAGTTGAAAGGAATCCTTTTCTTGTTAAGTATTACACTGCACGGAGGGCTGAGCAGCTCTCTTC
TAAGCTTTTTGCATGTTTAACTCACCAAATCAGTATAATGGATGCTTTCATTTCTAGACAAGTATCGCGGTCACCACATAGCAAGCACTCTCAGCGCAAGCATTCTCCCC
TCTCTTCTCTTGAAACCACCAGGGCAAGGAGGTCAAGATCTCGGTCCCCTGCTAGACGGCGCAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCATCATCACTGCCCTGTTTTCGAGTTTATCATTTACTGCAGGAGTTGAAAGGAATCCTTTTCTTGTTAAGTATTACACTGCACGGAGGGCTGAGCAGCTCTCTTC
TAAGCTTTTTGCATGTTTAACTCACCAAATCAGTATAATGGATGCTTTCATTTCTAGACAAGTATCGCGGTCACCACATAGCAAGCACTCTCAGCGCAAGCATTCTCCCC
TCTCTTCTCTTGAAACCACCAGGGCAAGGAGGTCAAGATCTCGGTCCCCTGCTAGACGGCGCAGATGACTGTCAAATGATTAAGAATTCCTAACTAATTGTATTGGTTTG
AAGACTCGGAATCTTAATTTCAACACCTGAATCTGGACTCCTCGGAAAAGATTCATAAGCTGCAGATTGTATCGGAATTCGAAGAGATGGGCAATGCACAGAAGTCTGTT
TCAATGGCTTTACTAGGTGGTTGTGATACTCTTAAGGGTCATGAACATATGAATTGATGCAGTCCGTTTGAACTGGCGATACTACATTCTGGTCTAATATGAGCTGTTGC
TTTAAATGTAGAAGATTATTGGTTACTGTTTCCATCGGTGTATGATGATCGTGGACTTGAAGGGAAAACCTCAGAAGGTGTTTTGATTTTCTAATGGTTGGTTACCCAAA
TCAGGAATAGGGTGCAAAAAGTGTATGTATGATGGGAAAAGAAATTTAACTCAAGGTTTGAACTTTTGGTGTTGTATGTATTCGAGTTATTAAATCTTTCTGTAGCCCTT
CCGTCTGCCTATGTTTTTTACATCTTCTGAGTTGCCTTAGCTACTAAAAAGGCGGCTCGAAACTAGGTTCGTAGCCAAATCCGAACTATTGGGGAGCAATTTTGAAG
Protein sequenceShow/hide protein sequence
MGIITALFSSLSFTAGVERNPFLVKYYTARRAEQLSSKLFACLTHQISIMDAFISRQVSRSPHSKHSQRKHSPLSSLETTRARRSRSRSPARRRR