; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G018600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G018600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionplant intracellular Ras-group-related LRR protein 3
Genome locationCmo_Chr04:9332666..9332926
RNA-Seq ExpressionCmoCh04G018600
SyntenyCmoCh04G018600
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601538.1 Plant intracellular Ras-group-related LRR protein 3, partial [Cucurbita argyrosperma subsp. sororia]4.4e-3193.51Show/hide
Query:  GNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDIGRAI
        G FNNLTEVPESTSDLCNLRELDLSDNQIR+LLDRF RLKK+IKLIMDQNPRLISPMG VDKGAQAVKDFMDIGRAI
Subjt:  GNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDIGRAI

KAG7032311.1 Plant intracellular Ras-group-related LRR protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-3694.19Show/hide
Query:  MSHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDIGRAI
        MS KVLILRGNFNNLT+VPESTSDLCNLRELDLSDNQIR+LLDRFGRLKK+IKLIMDQNPRLISPMG VDKGAQAVKDFMDIGRAI
Subjt:  MSHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDIGRAI

XP_004135272.1 plant intracellular Ras-group-related LRR protein 3 [Cucumis sativus]6.2e-2576.54Show/hide
Query:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI
        S +VL L GNFNNLTEVPES SDLCNL+ELDLSDNQI+AL DRFGRL+K+++L MDQNP +I PM  VDKGAQAVKDFMD+
Subjt:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI

XP_008446159.1 PREDICTED: plant intracellular Ras-group-related LRR protein 3 [Cucumis melo]8.1e-2576.54Show/hide
Query:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI
        S +VL L GNFNNLTEVPES SDLCNL+ELDLSDNQI+AL DRFGRL+K+++L MDQNP +I PM  VDKGAQAVKDFMD+
Subjt:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI

XP_038891316.1 plant intracellular Ras-group-related LRR protein 3 [Benincasa hispida]4.7e-2577.78Show/hide
Query:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI
        S +VL L GNFNNLTEVPES SDLCNL+ELDLSDNQIRAL D FGRL+K+I+L MDQNP +I PM  VDKGAQAVKDFMD+
Subjt:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI

TrEMBL top hitse value%identityAlignment
A0A0A0KQ50 Uncharacterized protein3.0e-2576.54Show/hide
Query:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI
        S +VL L GNFNNLTEVPES SDLCNL+ELDLSDNQI+AL DRFGRL+K+++L MDQNP +I PM  VDKGAQAVKDFMD+
Subjt:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI

A0A1S3BED8 plant intracellular Ras-group-related LRR protein 33.9e-2576.54Show/hide
Query:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI
        S +VL L GNFNNLTEVPES SDLCNL+ELDLSDNQI+AL DRFGRL+K+++L MDQNP +I PM  VDKGAQAVKDFMD+
Subjt:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI

A0A5A7ST38 Plant intracellular Ras-group-related LRR protein 33.9e-2576.54Show/hide
Query:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI
        S +VL L GNFNNLTEVPES SDLCNL+ELDLSDNQI+AL DRFGRL+K+++L MDQNP +I PM  VDKGAQAVKDFMD+
Subjt:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI

A0A6J1DC56 plant intracellular Ras-group-related LRR protein 34.3e-2475.31Show/hide
Query:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI
        S +VLIL GNFNNLTEVPES SDLCNLRELDLSDNQIRAL DRFGRL+K+ KL +DQNP  + PM  V+KG +AVKDFMD+
Subjt:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI

A0A6J1G0C5 plant intracellular Ras-group-related LRR protein 3-like2.5e-2475.95Show/hide
Query:  KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI
        +VLIL GNF N TEVPES  DLCNLRELDLSDNQIRAL DRFGRL+K++KL MDQNP +I PM  VDKG+QAVKD+MD+
Subjt:  KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDI

SwissProt top hitse value%identityAlignment
Q6ZH85 Plant intracellular Ras-group-related LRR protein 23.7e-1249.33Show/hide
Query:  LILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM
        L L  NF+++ ++P S  DL  LRELDLS+NQI AL D FGRL+++ +L +DQNP  + P   V  G  AVK++M
Subjt:  LILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM

Q7XK44 Plant intracellular Ras-group-related LRR protein 39.3e-1654.43Show/hide
Query:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM
        S ++L L  NF++L ++P S  DL NLRELDLS+NQI AL D FGRL K+ KL ++QNP  + PM  V+KG  AVK++M
Subjt:  SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM

Q8VYG9 Plant intracellular Ras-group-related LRR protein 91.4e-1148Show/hide
Query:  LILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM
        L L  NF++L ++P S  +L +L+ELDLS+NQI AL D FG L  + KL +DQNP ++ P   V +G +AVK +M
Subjt:  LILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM

Q8W4Q3 Plant intracellular Ras-group-related LRR protein 36.0e-1553.25Show/hide
Query:  KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM
        +V+ L  NF++L E+P++ SDL NLRELDLS+NQIR L D F RL+K+ KL +DQNP    P   V++ A+AV++FM
Subjt:  KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM

Q9LRV8 Plant intracellular Ras-group-related LRR protein 22.3e-1453.25Show/hide
Query:  KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM
        +VL L  NFNNL  VP++ +DL NLRELDLS+NQI+A+ D F RL+K+ KL +DQNP  I       +GA+ V++FM
Subjt:  KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM

Arabidopsis top hitse value%identityAlignment
AT1G12970.1 plant intracellular ras group-related LRR 34.3e-1653.25Show/hide
Query:  KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM
        +V+ L  NF++L E+P++ SDL NLRELDLS+NQIR L D F RL+K+ KL +DQNP    P   V++ A+AV++FM
Subjt:  KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM

AT3G11330.1 plant intracellular ras group-related LRR 99.9e-1348Show/hide
Query:  LILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM
        L L  NF++L ++P S  +L +L+ELDLS+NQI AL D FG L  + KL +DQNP ++ P   V +G +AVK +M
Subjt:  LILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM

AT3G26500.1 plant intracellular ras group-related LRR 21.6e-1553.25Show/hide
Query:  KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM
        +VL L  NFNNL  VP++ +DL NLRELDLS+NQI+A+ D F RL+K+ KL +DQNP  I       +GA+ V++FM
Subjt:  KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM

AT4G26050.1 plant intracellular ras group-related LRR 83.3e-0838.96Show/hide
Query:  KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM
        +VL +  NF +LT +P S   L +L ELD+S N I  L D  G L+++ KL ++ NP +  P   V++G +A+K +M
Subjt:  KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM

AT5G05850.1 plant intracellular ras group-related LRR 11.7e-1248Show/hide
Query:  LILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM
        L L  NF++L ++P S  DL +L+ELDLS+NQI +L D FG L  + KL +DQNP ++ P   V +G  AVK +M
Subjt:  LILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCATAAGGTGTTGATTCTCAGAGGTAATTTCAACAACTTGACTGAGGTTCCTGAATCAACCAGTGATCTCTGCAACCTAAGGGAGCTAGATCTTAGTGATAACCA
AATAAGAGCTCTTCTAGACAGATTTGGCCGGCTGAAAAAAGTAATCAAGTTGATTATGGATCAAAATCCGCGTCTGATTTCTCCAATGGGAAATGTTGACAAAGGGGCCC
AAGCGGTGAAGGATTTCATGGACATTGGAAGGGCGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTCATAAGGTGTTGATTCTCAGAGGTAATTTCAACAACTTGACTGAGGTTCCTGAATCAACCAGTGATCTCTGCAACCTAAGGGAGCTAGATCTTAGTGATAACCA
AATAAGAGCTCTTCTAGACAGATTTGGCCGGCTGAAAAAAGTAATCAAGTTGATTATGGATCAAAATCCGCGTCTGATTTCTCCAATGGGAAATGTTGACAAAGGGGCCC
AAGCGGTGAAGGATTTCATGGACATTGGAAGGGCGATTTAG
Protein sequenceShow/hide protein sequence
MSHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISPMGNVDKGAQAVKDFMDIGRAI