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CmoCh04G018730 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G018730
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNDR1/HIN1-like protein 13
Genome locationCmo_Chr04:9430902..9431323
RNA-Seq ExpressionCmoCh04G018730
SyntenyCmoCh04G018730
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135493.1 pistil-specific extensin-like protein [Cucumis sativus]6.6e-2556.25Show/hide
Query:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------
        MGYLLNA+VNLL  FTN NKKVSVD SSMILYL  GNTLIATQFIAPFS  K+E ML+N+ M+S+QV L I+ER+ +QKQ+E +G+K+E+KG        
Subjt:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------

Query:  ------------FSGLIVGGPLGGFRIK
                    +  L VGGP  G  IK
Subjt:  ------------FSGLIVGGPLGGFRIK

XP_008446136.1 PREDICTED: uncharacterized protein LOC103488950 [Cucumis melo]3.5e-2657.81Show/hide
Query:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------
        MGYLLNA+VNLL  FTN NKKVSVD SSMILYL  GNTLIATQFIAPFS  K+E ML+N+ M+S+QV L I+ER+ +QKQ+ETNG+K+E+KG        
Subjt:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------

Query:  ------------FSGLIVGGPLGGFRIK
                    +  L VGGP  G  IK
Subjt:  ------------FSGLIVGGPLGGFRIK

XP_022966925.1 NDR1/HIN1-like protein 13 [Cucurbita maxima]2.8e-2354.81Show/hide
Query:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------
        MGYLLNA+VNLL  FTN NKKVSVD SSMIL L  GNTLIAT+FIAPFS SKQ   L+NV M+S+QV L I+E   +QKQ+E NG+K+E++G        
Subjt:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------

Query:  ------------FSGLIVGGPLGG--FRIK-KIRH
                    +  LI+GGP GG   RIK K +H
Subjt:  ------------FSGLIVGGPLGG--FRIK-KIRH

XP_023541441.1 NDR1/HIN1-like protein 13 [Cucurbita pepo subsp. pepo]4.7e-2354.07Show/hide
Query:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------
        MGYLLNA++NLL  FTN NKKVSVD SSMIL L  GNTLIAT+FIAPFS SKQ   L+NV MMS+QV L I++   +QKQ+E NG+K+E++G        
Subjt:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------

Query:  ------------FSGLIVGGPLGG--FRIK-KIRH
                    +  LI+GGP GG   RIK K +H
Subjt:  ------------FSGLIVGGPLGG--FRIK-KIRH

XP_038892121.1 uncharacterized protein LOC120081374 [Benincasa hispida]5.1e-2555.47Show/hide
Query:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKGF-------
        MGYLLNA+VNLL  FTN NKKVSVD SSMILYL  GNTLIATQFIAPFS  K+E ML+N+ M+++QV L I+ER+ +QKQ+ETNG+++++KG        
Subjt:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKGF-------

Query:  -------------SGLIVGGPLGGFRIK
                       LI GGP GG  I+
Subjt:  -------------SGLIVGGPLGGFRIK

TrEMBL top hitse value%identityAlignment
A0A0A0KQ40 Uncharacterized protein3.2e-2556.25Show/hide
Query:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------
        MGYLLNA+VNLL  FTN NKKVSVD SSMILYL  GNTLIATQFIAPFS  K+E ML+N+ M+S+QV L I+ER+ +QKQ+E +G+K+E+KG        
Subjt:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------

Query:  ------------FSGLIVGGPLGGFRIK
                    +  L VGGP  G  IK
Subjt:  ------------FSGLIVGGPLGGFRIK

A0A1S3BF65 uncharacterized protein LOC1034889501.7e-2657.81Show/hide
Query:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------
        MGYLLNA+VNLL  FTN NKKVSVD SSMILYL  GNTLIATQFIAPFS  K+E ML+N+ M+S+QV L I+ER+ +QKQ+ETNG+K+E+KG        
Subjt:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------

Query:  ------------FSGLIVGGPLGGFRIK
                    +  L VGGP  G  IK
Subjt:  ------------FSGLIVGGPLGGFRIK

A0A5D3CVW5 NDR1/HIN1-like protein 131.7e-2657.81Show/hide
Query:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------
        MGYLLNA+VNLL  FTN NKKVSVD SSMILYL  GNTLIATQFIAPFS  K+E ML+N+ M+S+QV L I+ER+ +QKQ+ETNG+K+E+KG        
Subjt:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------

Query:  ------------FSGLIVGGPLGGFRIK
                    +  L VGGP  G  IK
Subjt:  ------------FSGLIVGGPLGGFRIK

A0A6J1G0D4 NDR1/HIN1-like protein 135.1e-2354.07Show/hide
Query:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------
        MGYLLNA++NLL  FTN NKKVSVD SSMIL L  GNTLIAT+FIAPFS SKQ   L+NV M S+QV L I+E   +QKQ+E NG+K+E++G        
Subjt:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------

Query:  ------------FSGLIVGGPLGG--FRIK-KIRH
                    +  LI+GGP GG   RIK K +H
Subjt:  ------------FSGLIVGGPLGG--FRIK-KIRH

A0A6J1HSY4 NDR1/HIN1-like protein 131.3e-2354.81Show/hide
Query:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------
        MGYLLNA+VNLL  FTN NKKVSVD SSMIL L  GNTLIAT+FIAPFS SKQ   L+NV M+S+QV L I+E   +QKQ+E NG+K+E++G        
Subjt:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG--------

Query:  ------------FSGLIVGGPLGG--FRIK-KIRH
                    +  LI+GGP GG   RIK K +H
Subjt:  ------------FSGLIVGGPLGG--FRIK-KIRH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13050.1 unknown protein1.9e-0936.96Show/hide
Query:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG
        MGY+LN ++ ++  FTN +KK SVD S ++  L   NTLIAT+ I PF   K   M  +  ++S+QV + +I+ + +Q Q+ T  + + ++G
Subjt:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG

AT1G13050.2 unknown protein1.9e-0936.96Show/hide
Query:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG
        MGY+LN ++ ++  FTN +KK SVD S ++  L   NTLIAT+ I PF   K   M  +  ++S+QV + +I+ + +Q Q+ T  + + ++G
Subjt:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG

AT3G26350.1 LOCATED IN: chloroplast4.7e-1336.97Show/hide
Query:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG-FSGLIVG
        MG+LLN ++ +L   TN +KK SV+ S +   L   NTLIATQ+I PF   K+  M  NV ++S+QV L   + + +Q+Q+ET  + + ++G F      
Subjt:  MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKG-FSGLIVG

Query:  GPLGGFRIKKIRHANNMLH
        GPL  +  K   H +  L+
Subjt:  GPLGGFRIKKIRHANNMLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATATCTGCTAAATGCGAATGTGAATTTGCTACCATACTTCACAAATGCAAACAAGAAAGTGAGTGTGGATTTGAGCTCCATGATCCTCTATCTTTGCATTGGTAA
CACACTTATTGCGACCCAATTCATAGCTCCCTTTTCAACATCCAAACAAGAACCAATGTTGATGAATGTTCAAATGATGTCTAATCAGGTCAGTCTCTCCATTATAGAAA
GAAAAATGGTTCAAAAGCAAGTGGAAACGAATGGGTTGAAGGTTGAGGTAAAGGGATTTTCTGGTTTGATTGTTGGTGGCCCTCTTGGTGGGTTTCGGATTAAAAAAATA
AGGCACGCTAACAACATGCTTCATTTCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATATCTGCTAAATGCGAATGTGAATTTGCTACCATACTTCACAAATGCAAACAAGAAAGTGAGTGTGGATTTGAGCTCCATGATCCTCTATCTTTGCATTGGTAA
CACACTTATTGCGACCCAATTCATAGCTCCCTTTTCAACATCCAAACAAGAACCAATGTTGATGAATGTTCAAATGATGTCTAATCAGGTCAGTCTCTCCATTATAGAAA
GAAAAATGGTTCAAAAGCAAGTGGAAACGAATGGGTTGAAGGTTGAGGTAAAGGGATTTTCTGGTTTGATTGTTGGTGGCCCTCTTGGTGGGTTTCGGATTAAAAAAATA
AGGCACGCTAACAACATGCTTCATTTCTATTGA
Protein sequenceShow/hide protein sequence
MGYLLNANVNLLPYFTNANKKVSVDLSSMILYLCIGNTLIATQFIAPFSTSKQEPMLMNVQMMSNQVSLSIIERKMVQKQVETNGLKVEVKGFSGLIVGGPLGGFRIKKI
RHANNMLHFY