; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G018750 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G018750
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNDR1/HIN1-like protein 13
Genome locationCmo_Chr04:9443618..9447390
RNA-Seq ExpressionCmoCh04G018750
SyntenyCmoCh04G018750
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012769.1 NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2342.86Show/hide
Query:  PPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKI------TGSKQLTYSEETSSYVP--------------LKDAYHILMRLFIRGI-----MG
        PPQ G     Q Q LDP  KAP LK+H  Q+PY +A  K+          ++   + + S  P               ++  +IL+    R        G
Subjt:  PPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKI------TGSKQLTYSEETSSYVP--------------LKDAYHILMRLFIRGI-----MG

Query:  RSFGNFKVGVNYRHNLIDLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSK
          F      +     L+ L +++       +SP F+V  ANL+AAYLDMGYLLNA  NLL  FTNPNKKV VD SSMIL L  GNTLIAT+FIAPFS SK
Subjt:  RSFGNFKVGVNYRHNLIDLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSK

Query:  QESMLMNVQMMSNQVRL
        Q S L+NV M S+QVRL
Subjt:  QESMLMNVQMMSNQVRL

XP_004135493.1 pistil-specific extensin-like protein [Cucumis sativus]4.8e-2744.59Show/hide
Query:  YHLPYLGSPPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKITGSK------QLTYSEETSSYVPLKDAYH---------------ILMRLFIR
        Y  P   SPP   HR+  Q QP DP GKAP LKK + QVPY     K           ++   + + S  P +   +               +LM L  +
Subjt:  YHLPYLGSPPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKITGSK------QLTYSEETSSYVPLKDAYH---------------ILMRLFIR

Query:  GIMGRSFGNFKVGVNYRHNLI-DLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAP
              FG     + +   ++  L I +       +SP F+V+TANL+AAYLDMGYLLNA  NLL  FTNPNKKV VD SSMILYL  GNTLIATQFIAP
Subjt:  GIMGRSFGNFKVGVNYRHNLI-DLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAP

Query:  FSTSKQESMLMNVQMMSNQVRL
        FS  K+ESML+N+ M+S+QVRL
Subjt:  FSTSKQESMLMNVQMMSNQVRL

XP_008446136.1 PREDICTED: uncharacterized protein LOC103488950 [Cucumis melo]1.0e-2443.44Show/hide
Query:  HLPYLGSPPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKI------TGSKQLTYSEETSSYVPLKDAYH---------------ILMRLFIRG
        H   L   PQ  + K PQ    DP GKAP LKK + QVPY +   K           ++   + + S  P +   +               +LM L  + 
Subjt:  HLPYLGSPPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKI------TGSKQLTYSEETSSYVPLKDAYH---------------ILMRLFIRG

Query:  IMGRSFGNFKVGVNYRHNLI-DLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPF
             FG     + +   ++  L I +       +SP F+V TANL+AAYLDMGYLLNA  NLL  FTNPNKKV VD SSMILYL  GNTLIATQFIAPF
Subjt:  IMGRSFGNFKVGVNYRHNLI-DLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPF

Query:  STSKQESMLMNVQMMSNQVRL
        S  K+ESML+N+ M+S+QVRL
Subjt:  STSKQESMLMNVQMMSNQVRL

XP_022945240.1 NDR1/HIN1-like protein 13 [Cucurbita moschata]2.5e-2342.86Show/hide
Query:  PPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKI------TGSKQLTYSEETSSYVP--------------LKDAYHILMRLFIRGI-----MG
        PPQ G     Q Q LDP  KAP LK+H  Q+PY +A  K+          ++   + + S  P               ++  +IL+    R        G
Subjt:  PPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKI------TGSKQLTYSEETSSYVP--------------LKDAYHILMRLFIRGI-----MG

Query:  RSFGNFKVGVNYRHNLIDLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSK
          F      +     L+ L +++       +SP F+V  ANL+AAYLDMGYLLNA  NLL  FTNPNKKV VD SSMIL L  GNTLIAT+FIAPFS SK
Subjt:  RSFGNFKVGVNYRHNLIDLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSK

Query:  QESMLMNVQMMSNQVRL
        Q S L+NV M S+QVRL
Subjt:  QESMLMNVQMMSNQVRL

XP_038892121.1 uncharacterized protein LOC120081374 [Benincasa hispida]8.0e-3043.16Show/hide
Query:  YHLPYLGSPPQLGHRKLPQCQPLDPLGKAPHL-KKHQRQVPYADAGHKITGSKQLTYSEETSSYVPLKDAYHILMRLFIRGIMGRSFGNFKVGVNYRHNL
        Y  P   SPP+  HR+ PQ QP D  GKAP L KK Q QVPY + G K          +++   V ++D               R   N  V  N R N 
Subjt:  YHLPYLGSPPQLGHRKLPQCQPLDPLGKAPHL-KKHQRQVPYADAGHKITGSKQLTYSEETSSYVPLKDAYHILMRLFIRGIMGRSFGNFKVGVNYRHNL

Query:  IDLDIHMHRTELTS---------------------------------RSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCI
         +  +HM     T+                                 +SP F+++TANL+AAYLDMGYLLNA  NLL  FTNPNKKV VD SSMILYL  
Subjt:  IDLDIHMHRTELTS---------------------------------RSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCI

Query:  GNTLIATQFIAPFSTSKQESMLMNVQMMSNQVRL
        GNTLIATQFIAPFS  K+ESML+N+ M+++QVRL
Subjt:  GNTLIATQFIAPFSTSKQESMLMNVQMMSNQVRL

TrEMBL top hitse value%identityAlignment
A0A0A0KQ40 Uncharacterized protein2.3e-2744.59Show/hide
Query:  YHLPYLGSPPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKITGSK------QLTYSEETSSYVPLKDAYH---------------ILMRLFIR
        Y  P   SPP   HR+  Q QP DP GKAP LKK + QVPY     K           ++   + + S  P +   +               +LM L  +
Subjt:  YHLPYLGSPPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKITGSK------QLTYSEETSSYVPLKDAYH---------------ILMRLFIR

Query:  GIMGRSFGNFKVGVNYRHNLI-DLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAP
              FG     + +   ++  L I +       +SP F+V+TANL+AAYLDMGYLLNA  NLL  FTNPNKKV VD SSMILYL  GNTLIATQFIAP
Subjt:  GIMGRSFGNFKVGVNYRHNLI-DLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAP

Query:  FSTSKQESMLMNVQMMSNQVRL
        FS  K+ESML+N+ M+S+QVRL
Subjt:  FSTSKQESMLMNVQMMSNQVRL

A0A1S3BF65 uncharacterized protein LOC1034889504.9e-2543.44Show/hide
Query:  HLPYLGSPPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKI------TGSKQLTYSEETSSYVPLKDAYH---------------ILMRLFIRG
        H   L   PQ  + K PQ    DP GKAP LKK + QVPY +   K           ++   + + S  P +   +               +LM L  + 
Subjt:  HLPYLGSPPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKI------TGSKQLTYSEETSSYVPLKDAYH---------------ILMRLFIRG

Query:  IMGRSFGNFKVGVNYRHNLI-DLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPF
             FG     + +   ++  L I +       +SP F+V TANL+AAYLDMGYLLNA  NLL  FTNPNKKV VD SSMILYL  GNTLIATQFIAPF
Subjt:  IMGRSFGNFKVGVNYRHNLI-DLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPF

Query:  STSKQESMLMNVQMMSNQVRL
        S  K+ESML+N+ M+S+QVRL
Subjt:  STSKQESMLMNVQMMSNQVRL

A0A5D3CVW5 NDR1/HIN1-like protein 134.9e-2543.44Show/hide
Query:  HLPYLGSPPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKI------TGSKQLTYSEETSSYVPLKDAYH---------------ILMRLFIRG
        H   L   PQ  + K PQ    DP GKAP LKK + QVPY +   K           ++   + + S  P +   +               +LM L  + 
Subjt:  HLPYLGSPPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKI------TGSKQLTYSEETSSYVPLKDAYH---------------ILMRLFIRG

Query:  IMGRSFGNFKVGVNYRHNLI-DLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPF
             FG     + +   ++  L I +       +SP F+V TANL+AAYLDMGYLLNA  NLL  FTNPNKKV VD SSMILYL  GNTLIATQFIAPF
Subjt:  IMGRSFGNFKVGVNYRHNLI-DLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPF

Query:  STSKQESMLMNVQMMSNQVRL
        S  K+ESML+N+ M+S+QVRL
Subjt:  STSKQESMLMNVQMMSNQVRL

A0A6J1G0D4 NDR1/HIN1-like protein 131.2e-2342.86Show/hide
Query:  PPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKI------TGSKQLTYSEETSSYVP--------------LKDAYHILMRLFIRGI-----MG
        PPQ G     Q Q LDP  KAP LK+H  Q+PY +A  K+          ++   + + S  P               ++  +IL+    R        G
Subjt:  PPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKI------TGSKQLTYSEETSSYVP--------------LKDAYHILMRLFIRGI-----MG

Query:  RSFGNFKVGVNYRHNLIDLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSK
          F      +     L+ L +++       +SP F+V  ANL+AAYLDMGYLLNA  NLL  FTNPNKKV VD SSMIL L  GNTLIAT+FIAPFS SK
Subjt:  RSFGNFKVGVNYRHNLIDLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSK

Query:  QESMLMNVQMMSNQVRL
        Q S L+NV M S+QVRL
Subjt:  QESMLMNVQMMSNQVRL

A0A6J1HSY4 NDR1/HIN1-like protein 132.0e-2342.59Show/hide
Query:  PPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKI------TGSKQLTYSEETSSYVP-----------------LKDAYHILMRLFIRGIMGRS
        PPQ G     Q Q  DP  KAP LK+H  Q+PYA+A  K+          ++   + + S  P                  ++  H+ +      +M   
Subjt:  PPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKI------TGSKQLTYSEETSSYVP-----------------LKDAYHILMRLFIRGIMGRS

Query:  FGNFKVGVNYRHNLI-DLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSKQ
        FG     + +   ++  L I +       +SP F+V  ANL+AAYLDMGYLLNA  NLL  FTNPNKKV VD SSMIL L  GNTLIAT+FIAPFS SKQ
Subjt:  FGNFKVGVNYRHNLI-DLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNA--NLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSKQ

Query:  ESMLMNVQMMSNQVRL
         S L+NV M+S+QVRL
Subjt:  ESMLMNVQMMSNQVRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13050.1 unknown protein1.1e-1340.35Show/hide
Query:  RSPWFNVTTANLSAAYLDMGYLLNANL--LTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSKQESMLMNVQMMSNQVRLSKASGNEWDEGTG
        RSP+F+++ A L+ A LDMGY+LN +L  +  FTNP+KK  VD S ++  L   NTLIAT+ I PF   K  SM  +  ++S+QV++      +     G
Subjt:  RSPWFNVTTANLSAAYLDMGYLLNANL--LTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSKQESMLMNVQMMSNQVRLSKASGNEWDEGTG

Query:  T-----RVRGDFLA
        T      +RG F A
Subjt:  T-----RVRGDFLA

AT1G13050.2 unknown protein1.1e-1340.35Show/hide
Query:  RSPWFNVTTANLSAAYLDMGYLLNANL--LTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSKQESMLMNVQMMSNQVRLSKASGNEWDEGTG
        RSP+F+++ A L+ A LDMGY+LN +L  +  FTNP+KK  VD S ++  L   NTLIAT+ I PF   K  SM  +  ++S+QV++      +     G
Subjt:  RSPWFNVTTANLSAAYLDMGYLLNANL--LTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSKQESMLMNVQMMSNQVRLSKASGNEWDEGTG

Query:  T-----RVRGDFLA
        T      +RG F A
Subjt:  T-----RVRGDFLA

AT3G26350.1 LOCATED IN: chloroplast1.8e-1648.94Show/hide
Query:  RSPWFNVTTANLSAAYLDMGYLLNANL--LTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSKQESMLMNVQMMSNQVRLSKASGNE
        RSP+ +++ ANL+AAYLDMG+LLN +L  L   TNP+KK  V+ S +   L   NTLIATQ+I PF   K+ SM  NV ++S+QV+L      E
Subjt:  RSPWFNVTTANLSAAYLDMGYLLNANL--LTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSKQESMLMNVQMMSNQVRLSKASGNE

AT4G26490.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family5.3e-0837.93Show/hide
Query:  RSPWFNVTTANLSAAYLDMGYLLNANL--LTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSKQESMLMNVQMMSNQVRL
        R P F++  ANL   Y D     N +L  L  FTNPNKK+ V    + + L   N LIA Q + PF   K E+ L  ++++S+ V L
Subjt:  RSPWFNVTTANLSAAYLDMGYLLNANL--LTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSKQESMLMNVQMMSNQVRL

AT5G56050.1 FUNCTIONS IN: molecular_function unknown1.7e-0633.33Show/hide
Query:  RSPWFNVTTANLSAAYLDMGYLLNANLLTY--FTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSKQESMLMNVQMMSNQVRL
        R+P F+++ A L+    +     N ++L    FTNPNKK+ V   ++++ L   +T IATQ + PFS    ++ L  ++++SN V L
Subjt:  RSPWFNVTTANLSAAYLDMGYLLNANLLTY--FTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSKQESMLMNVQMMSNQVRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAAATTCCTTCTACCATCCACCATATCCTTCTACCATCTACCATATCTTGGGTCACCGCCGCAATTGGGTCACCGTAAACTACCACAGTGCCAACCTCTAGACCC
ACTTGGGAAGGCACCACATTTGAAGAAGCATCAACGTCAAGTTCCATATGCGGATGCTGGGCATAAAATCACTGGATCAAAGCAGCTCACATATAGCGAAGAGACTTCTT
CATATGTGCCTCTTAAAGATGCATACCATATATTGATGCGATTGTTCATTCGTGGTATCATGGGGAGATCATTTGGCAATTTCAAGGTAGGAGTGAACTATAGGCATAAC
TTAATTGATTTAGATATACACATGCACCGAACAGAATTGACCTCAAGAAGCCCATGGTTCAATGTAACCACCGCCAATCTAAGCGCAGCCTATCTCGACATGGGATATCT
GCTAAATGCGAATTTGCTAACATACTTCACAAATCCAAACAAGAAAGTGAGGGTGGATTTGAGCTCCATGATCCTCTACCTTTGCATTGGTAACACACTTATTGCTACCC
AATTCATAGCACCTTTTTCAACATCCAAACAAGAATCAATGTTGATGAATGTTCAAATGATGTCTAATCAGGTCAGGCTCTCAAAAGCAAGTGGAAACGAATGGGATGAA
GGGACTGGAACAAGGGTGAGGGGTGATTTCTTGGCAGCCCCAAGACCAGCAGCCTCTTCCGTATCAACATCTTCTTCTTTCATTCCATCCGCCAGTTTCCAATCAAAACA
CAGCAACAGATTAGCCACTGCCAACTCCACCGTAAGGGTTGCCAAATTCATCGCAGGGCAAATTCTTCGTCCACTTCCGAAAGTTTATACGATCGTCGACTACATGTTGA
AAAAAGGCATCCATTTCAGCAAAGCTCTTCTCCAGCCTCTCATGAACACCATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAAATTCCTTCTACCATCCACCATATCCTTCTACCATCTACCATATCTTGGGTCACCGCCGCAATTGGGTCACCGTAAACTACCACAGTGCCAACCTCTAGACCC
ACTTGGGAAGGCACCACATTTGAAGAAGCATCAACGTCAAGTTCCATATGCGGATGCTGGGCATAAAATCACTGGATCAAAGCAGCTCACATATAGCGAAGAGACTTCTT
CATATGTGCCTCTTAAAGATGCATACCATATATTGATGCGATTGTTCATTCGTGGTATCATGGGGAGATCATTTGGCAATTTCAAGGTAGGAGTGAACTATAGGCATAAC
TTAATTGATTTAGATATACACATGCACCGAACAGAATTGACCTCAAGAAGCCCATGGTTCAATGTAACCACCGCCAATCTAAGCGCAGCCTATCTCGACATGGGATATCT
GCTAAATGCGAATTTGCTAACATACTTCACAAATCCAAACAAGAAAGTGAGGGTGGATTTGAGCTCCATGATCCTCTACCTTTGCATTGGTAACACACTTATTGCTACCC
AATTCATAGCACCTTTTTCAACATCCAAACAAGAATCAATGTTGATGAATGTTCAAATGATGTCTAATCAGGTCAGGCTCTCAAAAGCAAGTGGAAACGAATGGGATGAA
GGGACTGGAACAAGGGTGAGGGGTGATTTCTTGGCAGCCCCAAGACCAGCAGCCTCTTCCGTATCAACATCTTCTTCTTTCATTCCATCCGCCAGTTTCCAATCAAAACA
CAGCAACAGATTAGCCACTGCCAACTCCACCGTAAGGGTTGCCAAATTCATCGCAGGGCAAATTCTTCGTCCACTTCCGAAAGTTTATACGATCGTCGACTACATGTTGA
AAAAAGGCATCCATTTCAGCAAAGCTCTTCTCCAGCCTCTCATGAACACCATTTAA
Protein sequenceShow/hide protein sequence
MSKFLLPSTISFYHLPYLGSPPQLGHRKLPQCQPLDPLGKAPHLKKHQRQVPYADAGHKITGSKQLTYSEETSSYVPLKDAYHILMRLFIRGIMGRSFGNFKVGVNYRHN
LIDLDIHMHRTELTSRSPWFNVTTANLSAAYLDMGYLLNANLLTYFTNPNKKVRVDLSSMILYLCIGNTLIATQFIAPFSTSKQESMLMNVQMMSNQVRLSKASGNEWDE
GTGTRVRGDFLAAPRPAASSVSTSSSFIPSASFQSKHSNRLATANSTVRVAKFIAGQILRPLPKVYTIVDYMLKKGIHFSKALLQPLMNTI