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CmoCh04G019040 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G019040
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRING/U-box superfamily protein
Genome locationCmo_Chr04:9714250..9715980
RNA-Seq ExpressionCmoCh04G019040
SyntenyCmoCh04G019040
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022956579.1 uncharacterized protein LOC111458275 [Cucurbita moschata]1.5e-40100Show/hide
Query:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV
        MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV
Subjt:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV

XP_022998292.1 uncharacterized protein LOC111492969 isoform X1 [Cucurbita maxima]2.7e-3795.18Show/hide
Query:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV
        M QQQPKR SFKESVKAVEADIRRANALAAMFSR+YGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFH+LLYKV
Subjt:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV

XP_022998299.1 uncharacterized protein LOC111492969 isoform X2 [Cucurbita maxima]2.7e-3795.18Show/hide
Query:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV
        M QQQPKR SFKESVKAVEADIRRANALAAMFSR+YGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFH+LLYKV
Subjt:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV

XP_023531999.1 uncharacterized protein LOC111794088 isoform X2 [Cucurbita pepo subsp. pepo]1.3e-3998.8Show/hide
Query:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV
        MWQQQPKR SFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV
Subjt:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV

XP_038893281.1 E3 ubiquitin-protein ligase AIRP2-like isoform X1 [Benincasa hispida]4.3e-3587.95Show/hide
Query:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV
        MW +QPKRNSFKES+KAVEADI+ AN LAAM  RDYGGFCIQMRL YSPFA FFLHWIEWMDFSCTDPLPSFLGLFHILLYKV
Subjt:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV

TrEMBL top hitse value%identityAlignment
A0A1S3BDT3 peroxisome biogenesis factor 10-like isoform X16.7e-3484.34Show/hide
Query:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV
        MW +QPKRNSFKES+KAVEADIR AN LAAM  R+YGGFCIQMRL YSPFA F LHWIEWMDF+CTDP+PSFLGLFHILLYKV
Subjt:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV

A0A5A7SXP9 Peroxisome biogenesis factor 10-like isoform X16.7e-3484.34Show/hide
Query:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV
        MW +QPKRNSFKES+KAVEADIR AN LAAM  R+YGGFCIQMRL YSPFA F LHWIEWMDF+CTDP+PSFLGLFHILLYKV
Subjt:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV

A0A6J1GWY5 uncharacterized protein LOC1114582757.4e-41100Show/hide
Query:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV
        MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV
Subjt:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV

A0A6J1K7J3 uncharacterized protein LOC111492969 isoform X11.3e-3795.18Show/hide
Query:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV
        M QQQPKR SFKESVKAVEADIRRANALAAMFSR+YGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFH+LLYKV
Subjt:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV

A0A6J1KDZ0 uncharacterized protein LOC111492969 isoform X21.3e-3795.18Show/hide
Query:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV
        M QQQPKR SFKESVKAVEADIRRANALAAMFSR+YGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFH+LLYKV
Subjt:  MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV

SwissProt top hitse value%identityAlignment
Q9M022 E3 ubiquitin-protein ligase AIRP22.9e-1048Show/hide
Query:  RNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYK
        R SFK+S+KA+EADI+ AN LA+ +  +Y G  +QMRL YSP A  FL  ++W D          LGL  IL+YK
Subjt:  RNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYK

Arabidopsis top hitse value%identityAlignment
AT1G24440.1 RING/U-box superfamily protein2.5e-1245.57Show/hide
Query:  QPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV
        Q  ++S+++S+K +EADI  AN LAA       G  +QM+L  S  A FF+  ++WMDFSC   LP +   FHIL+YKV
Subjt:  QPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKV

AT5G01520.1 RING/U-box superfamily protein2.1e-1148Show/hide
Query:  RNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYK
        R SFK+S+KA+EADI+ AN LA+ +  +Y G  +QMRL YSP A  FL  ++W D          LGL  IL+YK
Subjt:  RNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYK

AT5G01520.2 RING/U-box superfamily protein2.1e-1148Show/hide
Query:  RNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYK
        R SFK+S+KA+EADI+ AN LA+ +  +Y G  +QMRL YSP A  FL  ++W D          LGL  IL+YK
Subjt:  RNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYK

AT5G58787.1 RING/U-box superfamily protein5.5e-1250Show/hide
Query:  SFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLY
        SFK+S+KA+EADI+ AN LA  + R+  G  +QMRL YSP A FFL  ++W D      L  FLGL  +L+Y
Subjt:  SFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLY

AT5G58787.2 RING/U-box superfamily protein5.5e-1250Show/hide
Query:  SFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLY
        SFK+S+KA+EADI+ AN LA  + R+  G  +QMRL YSP A FFL  ++W D      L  FLGL  +L+Y
Subjt:  SFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCAACAACAGCCCAAAAGGAACTCGTTTAAAGAATCTGTCAAGGCTGTTGAAGCTGATATACGACGTGCAAATGCCTTGGCAGCTATGTTCTCGAGAGATTACGG
TGGATTTTGCATTCAAATGAGATTGCAATACAGCCCATTTGCTCTCTTTTTTCTTCATTGGATTGAATGGATGGATTTCAGTTGCACAGATCCTCTTCCAAGTTTCTTGG
GCCTTTTCCACATACTCTTGTACAAGGTGCTTCCCTCAACTCTTGCAGCATATTCACAACCTGAATTCTAA
mRNA sequenceShow/hide mRNA sequence
TTTTTAATCAATATTATAGAAAATTTTGAATGAGGGCGTCAAGTTAACGAAATTGAAAATTTATAATCTACGTTGATACCATAACAAATTTCGGGGTCAAAATTAAATTA
TTTAAAAAAAAAAAAATAATTTTGATTGAAAACTTGCTAATGGGCCTTGGTCCAAAGCAACCTTGAGAGCCTCTAAATGAAACGGCCTCGGGCTGAAGAAGGGAGGTGAC
CTAATCGTCCGGATCCTTACATTTTTCTGCCAATCTCTGTCTAAGCTCCGATGAACGAACATGGAGGAACCCATCGGAGAGAGACAGAAATGCCGATATCAGAATTCGTG
AGGGACAGACGATGGGCGGAATGAAGCGGCGCGATCAAAGTTGGGAAGGAAGGAAGGTCTGACTTGGAAACAATGCAATCCCCGACTAAGAAACAATGGATAAACACTAA
ACACAAGATGTCTGGACACGGCCTTTCCACAAATATATCTCTTCTTTTCTCAACATCATCTGGCTGCTGCTCTGTTCTGTCAAGTTGGAAGGAGAAAGAATGTGGCAACA
ACAGCCCAAAAGGAACTCGTTTAAAGAATCTGTCAAGGCTGTTGAAGCTGATATACGACGTGCAAATGCCTTGGCAGCTATGTTCTCGAGAGATTACGGTGGATTTTGCA
TTCAAATGAGATTGCAATACAGCCCATTTGCTCTCTTTTTTCTTCATTGGATTGAATGGATGGATTTCAGTTGCACAGATCCTCTTCCAAGTTTCTTGGGCCTTTTCCAC
ATACTCTTGTACAAGGTGCTTCCCTCAACTCTTGCAGCATATTCACAACCTGAATTCTAA
Protein sequenceShow/hide protein sequence
MWQQQPKRNSFKESVKAVEADIRRANALAAMFSRDYGGFCIQMRLQYSPFALFFLHWIEWMDFSCTDPLPSFLGLFHILLYKVLPSTLAAYSQPEF