; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G019230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G019230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:9824461..9825330
RNA-Seq ExpressionCmoCh04G019230
SyntenyCmoCh04G019230
Gene Ontology termsNA
InterPro domainsIPR038947 - At3g27210-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601591.1 hypothetical protein SDJN03_06824, partial [Cucurbita argyrosperma subsp. sororia]2.8e-9184.36Show/hide
Query:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFG------------------------SIPTPSLIFTPIWRPN
        MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVP+PTELDQANGRLCSSPPSSHLPSSPEFG                           TPS   TPIWRPN
Subjt:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFG------------------------SIPTPSLIFTPIWRPN

Query:  AVETPAVEPSPEGTKKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL
        AVETPAVEPSPEGTKKLLIELFRESFDSEHG TIGTAMSNGHIGVVIMEG NNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL
Subjt:  AVETPAVEPSPEGTKKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL

Query:  SPCRGGGPVHP
        SPCRGGGPVHP
Subjt:  SPCRGGGPVHP

KAG7032355.1 hypothetical protein SDJN02_06400 [Cucurbita argyrosperma subsp. argyrosperma]1.8e-7782.89Show/hide
Query:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFGSIPTPSLIFTPIWRPNAVETPAVEPSPEGTKKLLIELFRE
        MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVP+PTELDQANGRLCSSPPSSHLPSSPEF                             GTKKLLIELFRE
Subjt:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFGSIPTPSLIFTPIWRPNAVETPAVEPSPEGTKKLLIELFRE

Query:  SFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLLSPCRGGGPVHP
        SFDSEHG TIGTAMSNGHIGVVIMEG NNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLLSPCRGGGPVHP
Subjt:  SFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLLSPCRGGGPVHP

XP_022957118.1 uncharacterized protein At3g27210-like [Cucurbita moschata]3.0e-9385.31Show/hide
Query:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFG------------------------SIPTPSLIFTPIWRPN
        MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFG                            PS   TPIWRPN
Subjt:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFG------------------------SIPTPSLIFTPIWRPN

Query:  AVETPAVEPSPEGTKKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL
        AVETPAVEPSPEGTKKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL
Subjt:  AVETPAVEPSPEGTKKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL

Query:  SPCRGGGPVHP
        SPCRGGGPVHP
Subjt:  SPCRGGGPVHP

XP_022998641.1 uncharacterized protein At3g27210-like [Cucurbita maxima]9.8e-9283.41Show/hide
Query:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFG------------------------SIPTPSLIFTPIWRPN
        MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVP+PTELDQANGRLCSSPPSSHLPSSPEFG                           TPS   TPIWRPN
Subjt:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFG------------------------SIPTPSLIFTPIWRPN

Query:  AVETPAVEPSPEGTKKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL
        A+ETPAVEPSPEGTKKLLIELFRESFDSEHG TIGTA SNGHIGVVIMEGNNNNNNNSKPNC GRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL
Subjt:  AVETPAVEPSPEGTKKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL

Query:  SPCRGGGPVHP
        SPCRGGGPVHP
Subjt:  SPCRGGGPVHP

XP_023541226.1 uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo]2.4e-9083.89Show/hide
Query:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFG------------------------SIPTPSLIFTPIWRPN
        MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFG                           TPS   TPIWRPN
Subjt:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFG------------------------SIPTPSLIFTPIWRPN

Query:  AVETPAVEPSPEGTKKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL
        AVETPAVEPSPEGTKKLLIELFRESFDSEHG TIGTA SNGHIGVVIMEG  NNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL
Subjt:  AVETPAVEPSPEGTKKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL

Query:  SPCRGGGPVHP
        SPCRGGGPVHP
Subjt:  SPCRGGGPVHP

TrEMBL top hitse value%identityAlignment
A0A0A0KTD3 Uncharacterized protein3.0e-4655.11Show/hide
Query:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRV--------PIPTELDQANGRLCSSPP--SSHL-PSSPEFG------------------------SIPTP
        MGNCVL+RRDQKSD KFKWSVG   +VNV V        P      +  GRLCSSPP  SSHL PSSP FG                           TP
Subjt:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRV--------PIPTELDQANGRLCSSPP--SSHL-PSSPEFG------------------------SIPTP

Query:  SLIFTPIWRPNAVETPAVEP-SPEGTKKLLIELFRESFDSEHGSTI-GTAMSNGH--IGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPK
        S   TPIWRPN +E P  +P SP+ TKKLL ELF+ESF+ +HG +I  T +SN H  I VVIME      NN KP     S+SVKG SAQS  WCIPVPK
Subjt:  SLIFTPIWRPNAVETPAVEP-SPEGTKKLLIELFRESFDSEHGSTI-GTAMSNGH--IGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPK

Query:  LARSLSLSDKKKRLLSPCRGGGPVH
        LARSLSL +KKKRLLSPCRGGG VH
Subjt:  LARSLSLSDKKKRLLSPCRGGGPVH

A0A1S3BEU1 uncharacterized protein At3g27210-like3.7e-4454.26Show/hide
Query:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELD--------QANGRLCSSPP-SSHL-PSSPEFG------------------------SIPTPS
        MGNCVL+RRDQK D KFKWSVGSG +VNV V    E D        +  GRLCSSP  SSHL PSSP FG                           TPS
Subjt:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELD--------QANGRLCSSPP-SSHL-PSSPEFG------------------------SIPTPS

Query:  LIFTPIWRPNAVETPAVEP-SPEGTKKLLIELFRESFDSEHGSTIGT-AMSNGH-IGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLA
           TP+WRPN +E P  +P SP+  KKLL ELF+ESF+ EHG +I    +SN H I VVIME      N+ KP     S+SVKG S QST WCIPVPKL 
Subjt:  LIFTPIWRPNAVETPAVEP-SPEGTKKLLIELFRESFDSEHGSTIGT-AMSNGH-IGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLA

Query:  RSLSLSDKKKRLLSPCRGGGPVH
        RSLSL +KKKRLLSPCRGGG VH
Subjt:  RSLSLSDKKKRLLSPCRGGGPVH

A0A5A7SSL1 Uncharacterized protein3.7e-4454.26Show/hide
Query:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELD--------QANGRLCSSPP-SSHL-PSSPEFG------------------------SIPTPS
        MGNCVL+RRDQK D KFKWSVGSG +VNV V    E D        +  GRLCSSP  SSHL PSSP FG                           TPS
Subjt:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELD--------QANGRLCSSPP-SSHL-PSSPEFG------------------------SIPTPS

Query:  LIFTPIWRPNAVETPAVEP-SPEGTKKLLIELFRESFDSEHGSTIGT-AMSNGH-IGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLA
           TP+WRPN +E P  +P SP+  KKLL ELF+ESF+ EHG +I    +SN H I VVIME      N+ KP     S+SVKG S QST WCIPVPKL 
Subjt:  LIFTPIWRPNAVETPAVEP-SPEGTKKLLIELFRESFDSEHGSTIGT-AMSNGH-IGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLA

Query:  RSLSLSDKKKRLLSPCRGGGPVH
        RSLSL +KKKRLLSPCRGGG VH
Subjt:  RSLSLSDKKKRLLSPCRGGGPVH

A0A6J1GZB4 uncharacterized protein At3g27210-like1.5e-9385.31Show/hide
Query:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFG------------------------SIPTPSLIFTPIWRPN
        MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFG                            PS   TPIWRPN
Subjt:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFG------------------------SIPTPSLIFTPIWRPN

Query:  AVETPAVEPSPEGTKKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL
        AVETPAVEPSPEGTKKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL
Subjt:  AVETPAVEPSPEGTKKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL

Query:  SPCRGGGPVHP
        SPCRGGGPVHP
Subjt:  SPCRGGGPVHP

A0A6J1KAP3 uncharacterized protein At3g27210-like4.7e-9283.41Show/hide
Query:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFG------------------------SIPTPSLIFTPIWRPN
        MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVP+PTELDQANGRLCSSPPSSHLPSSPEFG                           TPS   TPIWRPN
Subjt:  MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFG------------------------SIPTPSLIFTPIWRPN

Query:  AVETPAVEPSPEGTKKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL
        A+ETPAVEPSPEGTKKLLIELFRESFDSEHG TIGTA SNGHIGVVIMEGNNNNNNNSKPNC GRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL
Subjt:  AVETPAVEPSPEGTKKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLL

Query:  SPCRGGGPVHP
        SPCRGGGPVHP
Subjt:  SPCRGGGPVHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTGTGTTCTTATTCGTAGAGACCAAAAATCTGACCCTAAATTCAAGTGGTCGGTCGGTTCCGGTGCGCTCGTCAATGTCCGTGTGCCGATCCCGACCGAGCT
CGACCAAGCCAACGGCAGGCTCTGTTCCAGTCCGCCGTCTTCTCATCTTCCCAGCTCGCCTGAATTCGGTTCGATTCCAACCCCCTCTTTGATTTTCACTCCGATATGGC
GTCCGAACGCCGTCGAGACGCCGGCGGTGGAGCCATCGCCGGAAGGAACGAAGAAGCTGCTAATTGAGCTGTTTCGCGAGAGCTTTGATAGCGAGCATGGAAGCACAATT
GGGACTGCAATGAGTAATGGTCACATTGGGGTGGTGATTATGGAAGGTAATAATAATAATAATAATAATAGCAAGCCAAATTGTGGCGGGCGTTCAAGATCGGTGAAAGG
GAAATCGGCGCAGTCCACGGCGTGGTGCATTCCGGTCCCGAAATTGGCGCGGAGTCTCAGCCTTAGCGACAAAAAGAAGAGGCTGCTCAGCCCTTGCCGCGGCGGTGGAC
CGGTGCACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAATTGTGTTCTTATTCGTAGAGACCAAAAATCTGACCCTAAATTCAAGTGGTCGGTCGGTTCCGGTGCGCTCGTCAATGTCCGTGTGCCGATCCCGACCGAGCT
CGACCAAGCCAACGGCAGGCTCTGTTCCAGTCCGCCGTCTTCTCATCTTCCCAGCTCGCCTGAATTCGGTTCGATTCCAACCCCCTCTTTGATTTTCACTCCGATATGGC
GTCCGAACGCCGTCGAGACGCCGGCGGTGGAGCCATCGCCGGAAGGAACGAAGAAGCTGCTAATTGAGCTGTTTCGCGAGAGCTTTGATAGCGAGCATGGAAGCACAATT
GGGACTGCAATGAGTAATGGTCACATTGGGGTGGTGATTATGGAAGGTAATAATAATAATAATAATAATAGCAAGCCAAATTGTGGCGGGCGTTCAAGATCGGTGAAAGG
GAAATCGGCGCAGTCCACGGCGTGGTGCATTCCGGTCCCGAAATTGGCGCGGAGTCTCAGCCTTAGCGACAAAAAGAAGAGGCTGCTCAGCCCTTGCCGCGGCGGTGGAC
CGGTGCACCCTTGA
Protein sequenceShow/hide protein sequence
MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPIPTELDQANGRLCSSPPSSHLPSSPEFGSIPTPSLIFTPIWRPNAVETPAVEPSPEGTKKLLIELFRESFDSEHGSTI
GTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSAQSTAWCIPVPKLARSLSLSDKKKRLLSPCRGGGPVHP