; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G019250 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G019250
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionnuclear pore complex protein NUP54-like
Genome locationCmo_Chr04:9836668..9841381
RNA-Seq ExpressionCmoCh04G019250
SyntenyCmoCh04G019250
Gene Ontology termsGO:0006607 - NLS-bearing protein import into nucleus (biological process)
GO:0006999 - nuclear pore organization (biological process)
GO:0036228 - protein localization to nuclear inner membrane (biological process)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR024864 - Nucleoporin Nup54/Nup57/Nup44
IPR025712 - Nucleoporin Nup54, alpha-helical domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601593.1 Nuclear pore complex protein NUP54, partial [Cucurbita argyrosperma subsp. sororia]3.3e-21798.07Show/hide
Query:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFATGFGSSLFS
        MFGAQQSSSAFGTPQSTPAF TLQSTPAF TLQSTPAFGTPQTTP FGTPQS PAFSTLASTPAFGT SASPAFGNLSTPAFGTPSTSSFATGFGSSLFS
Subjt:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFATGFGSSLFS

Query:  TPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP
        TPFSSQPSQ+QQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPF NAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP
Subjt:  TPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP

Query:  AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA
        AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA
Subjt:  AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA

Query:  LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM
        LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLA+MQEVLQQQTEAIARLGTVLKRDVRDM
Subjt:  LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM

Query:  EIIMAEDKEMTDDPS
        EIIMAEDKEMTDDPS
Subjt:  EIIMAEDKEMTDDPS

XP_022945454.1 nuclear pore complex protein NUP54 [Cucurbita moschata]5.0e-18988.22Show/hide
Query:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNL-STPAFGTPSTSSFATGFGSSLF
        MFGAQ SSSAFGTPQSTPAFGT QSTPAFGT QSTPAFGTPQ+TP FGTPQ         STPAFGT SASPAFGN  STPAFGTPS+SSFATGFGSSLF
Subjt:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNL-STPAFGTPSTSSFATGFGSSLF

Query:  STPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAK
        STPFSSQPS  QQQQQQSPLFQ   A GFGFQTPFAAPQSSPF NAQL TQMAPVAPLPF +ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQYRAK
Subjt:  STPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAK

Query:  PAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE
        PAGVSD MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVIL+DAERLRMTQSNVK LQRHFLADTLPW+QRLKQKEQGLQRRLLR+MR+VE
Subjt:  PAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE

Query:  ALESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRD
        ALESKGCRVP+M GEAELAE+L+LITRQ + SGAELSRRV+NLL IT GQ NGSGAGNSIYLQGS KIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRD
Subjt:  ALESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRD

Query:  MEIIMAEDKEMTDDPS
        MEIIMAEDKEM DD S
Subjt:  MEIIMAEDKEMTDDPS

XP_022957465.1 nuclear pore complex protein NUP54-like [Cucurbita moschata]5.9e-222100Show/hide
Query:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFATGFGSSLFS
        MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFATGFGSSLFS
Subjt:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFATGFGSSLFS

Query:  TPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP
        TPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP
Subjt:  TPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP

Query:  AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA
        AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA
Subjt:  AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA

Query:  LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM
        LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM
Subjt:  LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM

Query:  EIIMAEDKEMTDDPS
        EIIMAEDKEMTDDPS
Subjt:  EIIMAEDKEMTDDPS

XP_022998033.1 nuclear pore complex protein NUP54-like [Cucurbita maxima]7.7e-20694.46Show/hide
Query:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFATGFGSSLFS
        MFGAQQSSSAFGTPQSTPAFGT Q+TPAFGT QSTPAFGTPQ+TP FGTP         +STPAFGT SASPAFGNLSTPAFGTPSTSSFATGFGSSLFS
Subjt:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFATGFGSSLFS

Query:  TPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP
        TPFSSQPS    QQQQSPLFQQRGA GFGFQTPFAAPQSSPF NAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP
Subjt:  TPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP

Query:  AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA
        AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA
Subjt:  AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA

Query:  LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM
        LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM
Subjt:  LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM

Query:  EIIMAEDKEMTDDPS
        +IIMAEDKEMTDDPS
Subjt:  EIIMAEDKEMTDDPS

XP_023515339.1 nuclear pore complex protein NUP54-like [Cucurbita pepo subsp. pepo]1.1e-21597.35Show/hide
Query:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFATGFGSSLFS
        MFGAQQSSSAFGTPQSTPAFGTL+STPAFGTL+STPAFGTPQ+TP FGTPQSTPAF T ASTPAFGT SASPAFGNLSTPAFGTPSTSSFATGFGSSLFS
Subjt:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFATGFGSSLFS

Query:  TPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP
        TPFSSQP QQQQQQQQSPLFQQRGA GFGFQTPFAAPQSSPF NAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP
Subjt:  TPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP

Query:  AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA
        AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA
Subjt:  AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA

Query:  LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM
        LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM
Subjt:  LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM

Query:  EIIMAEDKEMTDDPS
        EIIMAED EMTDDPS
Subjt:  EIIMAEDKEMTDDPS

TrEMBL top hitse value%identityAlignment
A0A1S3BE47 nuclear pore complex protein NUP542.6e-18390.72Show/hide
Query:  FGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNL-STPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQRGAAG
        FG   S+ AFGTPQ+TP FGTPQSTPAF T ASTPAFGT SASPAFGNL STPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQ QQS LF Q  A G
Subjt:  FGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNL-STPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQRGAAG

Query:  FGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLW
        FGFQTPFAAPQS+PF NAQL TQMAPVAPLPF LADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP GVSD MWAEAMAKLEGMESADRERLW
Subjt:  FGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLW

Query:  PQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLSLITRQ
        PQLVQGFKDLSQRLKIQDEVIL+D+ERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKL+LITRQ
Subjt:  PQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLSLITRQ

Query:  FKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDMEIIMAEDKEMTDDPS
         K SGAELS+RVQNLL ITRGQ NGSG GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DD S
Subjt:  FKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDMEIIMAEDKEMTDDPS

A0A5A7SSX4 Nuclear pore complex protein NUP542.6e-18390.72Show/hide
Query:  FGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNL-STPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQRGAAG
        FG   S+ AFGTPQ+TP FGTPQSTPAF T ASTPAFGT SASPAFGNL STPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQ QQS LF Q  A G
Subjt:  FGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNL-STPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQRGAAG

Query:  FGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLW
        FGFQTPFAAPQS+PF NAQL TQMAPVAPLPF LADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP GVSD MWAEAMAKLEGMESADRERLW
Subjt:  FGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLW

Query:  PQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLSLITRQ
        PQLVQGFKDLSQRLKIQDEVIL+D+ERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPV+KGEAELAEKL+LITRQ
Subjt:  PQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLSLITRQ

Query:  FKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDMEIIMAEDKEMTDDPS
         K SGAELS+RVQNLL ITRGQ NGSG GNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLG VLKRDVRDMEIIMAEDKEM DD S
Subjt:  FKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDMEIIMAEDKEMTDDPS

A0A6J1G105 nuclear pore complex protein NUP542.4e-18988.22Show/hide
Query:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNL-STPAFGTPSTSSFATGFGSSLF
        MFGAQ SSSAFGTPQSTPAFGT QSTPAFGT QSTPAFGTPQ+TP FGTPQ         STPAFGT SASPAFGN  STPAFGTPS+SSFATGFGSSLF
Subjt:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNL-STPAFGTPSTSSFATGFGSSLF

Query:  STPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAK
        STPFSSQPS  QQQQQQSPLFQ   A GFGFQTPFAAPQSSPF NAQL TQMAPVAPLPF +ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQYRAK
Subjt:  STPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAK

Query:  PAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE
        PAGVSD MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVIL+DAERLRMTQSNVK LQRHFLADTLPW+QRLKQKEQGLQRRLLR+MR+VE
Subjt:  PAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVE

Query:  ALESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRD
        ALESKGCRVP+M GEAELAE+L+LITRQ + SGAELSRRV+NLL IT GQ NGSGAGNSIYLQGS KIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRD
Subjt:  ALESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRD

Query:  MEIIMAEDKEMTDDPS
        MEIIMAEDKEM DD S
Subjt:  MEIIMAEDKEMTDDPS

A0A6J1H0M2 nuclear pore complex protein NUP54-like2.9e-222100Show/hide
Query:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFATGFGSSLFS
        MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFATGFGSSLFS
Subjt:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFATGFGSSLFS

Query:  TPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP
        TPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP
Subjt:  TPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP

Query:  AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA
        AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA
Subjt:  AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA

Query:  LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM
        LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM
Subjt:  LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM

Query:  EIIMAEDKEMTDDPS
        EIIMAEDKEMTDDPS
Subjt:  EIIMAEDKEMTDDPS

A0A6J1KFN7 nuclear pore complex protein NUP54-like3.7e-20694.46Show/hide
Query:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFATGFGSSLFS
        MFGAQQSSSAFGTPQSTPAFGT Q+TPAFGT QSTPAFGTPQ+TP FGTP         +STPAFGT SASPAFGNLSTPAFGTPSTSSFATGFGSSLFS
Subjt:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFATGFGSSLFS

Query:  TPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP
        TPFSSQPS    QQQQSPLFQQRGA GFGFQTPFAAPQSSPF NAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP
Subjt:  TPFSSQPSQQQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP

Query:  AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA
        AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA
Subjt:  AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA

Query:  LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM
        LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM
Subjt:  LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDM

Query:  EIIMAEDKEMTDDPS
        +IIMAEDKEMTDDPS
Subjt:  EIIMAEDKEMTDDPS

SwissProt top hitse value%identityAlignment
F4ID16 Nuclear pore complex protein NUP98B5.0e-0641.57Show/hide
Query:  MFGAQQSSSAFG-TPQ----STPAFGTLQSTPAFGTLQS----TPAFG-------TPQTTPVFG--TPQSTPAF--STLASTPAFGTSSASPAFGNLSTP
        +FGA Q+SS FG +PQ    ST AFG   STP+FG+  S    T  FG       TPQ++P FG  T QS PAF  ST  S+  FG +S +PAFG  STP
Subjt:  MFGAQQSSSAFG-TPQ----STPAFGTLQSTPAFGTLQS----TPAFG-------TPQTTPVFG--TPQSTPAF--STLASTPAFGTSSASPAFGNLSTP

Query:  AFGTPSTSSF------------ATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQRGAAGFG-FQTPFAAPQSSPFLNA
        AFG  +TS F             TGFG S  STP     S        +P F       FG   TP     SSP   A
Subjt:  AFGTPSTSSF------------ATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQRGAAGFG-FQTPFAAPQSSPFLNA

Q8GYF7 Nuclear pore complex protein NUP543.1e-13368.57Show/hide
Query:  FGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQQQQQQQQ----SPLFQQRGAAGFGFQT
        FGTP ++P FGTP STPAF T  S+PAFGT SA        TPAFGTPS  SF++ GFGSSLFS+PFSSQ  QQQQQQQQ    S LFQQ+ ++ FGFQ+
Subjt:  FGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQQQQQQQQ----SPLFQQRGAAGFGFQT

Query:  PF----AAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWP
        PF       Q +PF NAQL TQMAPVAP+P+ LADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQYR KPA VSD MWAEAM+KLEGM+S +RERLWP
Subjt:  PF----AAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWP

Query:  QLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLSLITRQF
        QLVQGFKDLSQRLK+QDEV+++D +R++ TQSNVKMLQRH  A T P ++RL+QKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL+ ITRQ 
Subjt:  QLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLSLITRQF

Query:  KESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDMEIIMAEDKEMTDD
        K  GAELSRRVQ+L  I+R Q N   AG+S+YL GS KI EQSL DMQEVLQQ+TEAI RLG VLKRD+RDMEI++AED EM  D
Subjt:  KESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDMEIIMAEDKEMTDD

Q9VDV3 Nuclear pore complex protein Nup581.0e-1449.55Show/hide
Query:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFG-TLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFG-NLSTPAFGTP-STSSFATGFGSS
        +F A  ++ AFG P +TPAFG   STP FG T  + PAFGT   TP FG P +T AF   A+TPAFG ++A+PAFG   +TPAFG P +TS+F     ++
Subjt:  MFGAQQSSSAFGTPQSTPAFGTLQSTPAFG-TLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFG-NLSTPAFGTP-STSSFATGFGSS

Query:  LFSTPFSSQPS
         F  P S+Q S
Subjt:  LFSTPFSSQPS

Arabidopsis top hitse value%identityAlignment
AT1G24310.1 unknown protein2.2e-13468.57Show/hide
Query:  FGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQQQQQQQQ----SPLFQQRGAAGFGFQT
        FGTP ++P FGTP STPAF T  S+PAFGT SA        TPAFGTPS  SF++ GFGSSLFS+PFSSQ  QQQQQQQQ    S LFQQ+ ++ FGFQ+
Subjt:  FGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQQQQQQQQ----SPLFQQRGAAGFGFQT

Query:  PF----AAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWP
        PF       Q +PF NAQL TQMAPVAP+P+ LADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQYR KPA VSD MWAEAM+KLEGM+S +RERLWP
Subjt:  PF----AAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWP

Query:  QLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLSLITRQF
        QLVQGFKDLSQRLK+QDEV+++D +R++ TQSNVKMLQRH  A T P ++RL+QKEQ LQRR+LRVMRI+E LE KG R+P+ KGEAEL+EKL+ ITRQ 
Subjt:  QLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLSLITRQF

Query:  KESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDMEIIMAEDKEMTDD
        K  GAELSRRVQ+L  I+R Q N   AG+S+YL GS KI EQSL DMQEVLQQ+TEAI RLG VLKRD+RDMEI++AED EM  D
Subjt:  KESGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDMEIIMAEDKEMTDD

AT1G59660.1 Nucleoporin autopeptidase3.5e-0741.57Show/hide
Query:  MFGAQQSSSAFG-TPQ----STPAFGTLQSTPAFGTLQS----TPAFG-------TPQTTPVFG--TPQSTPAF--STLASTPAFGTSSASPAFGNLSTP
        +FGA Q+SS FG +PQ    ST AFG   STP+FG+  S    T  FG       TPQ++P FG  T QS PAF  ST  S+  FG +S +PAFG  STP
Subjt:  MFGAQQSSSAFG-TPQ----STPAFGTLQSTPAFGTLQS----TPAFG-------TPQTTPVFG--TPQSTPAF--STLASTPAFGTSSASPAFGNLSTP

Query:  AFGTPSTSSF------------ATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQRGAAGFG-FQTPFAAPQSSPFLNA
        AFG  +TS F             TGFG S  STP     S        +P F       FG   TP     SSP   A
Subjt:  AFGTPSTSSF------------ATGFGSSLFSTPFSSQPSQQQQQQQQSPLFQQRGAAGFG-FQTPFAAPQSSPFLNA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGGAGCTCAACAGTCCTCCTCCGCCTTCGGCACTCCACAATCAACTCCGGCCTTTGGCACTCTGCAATCAACTCCGGCCTTTGGCACTCTGCAATCAACTCCGGC
CTTTGGCACTCCGCAGACAACTCCGGTATTTGGCACTCCACAATCGACTCCAGCATTTAGCACGCTGGCGTCCACTCCTGCCTTCGGAACTTCATCGGCATCTCCCGCAT
TCGGAAACCTTTCAACTCCTGCCTTCGGAACTCCATCTACATCGTCTTTTGCCACCGGCTTCGGTTCGTCTCTCTTCTCCACTCCATTCTCTTCTCAGCCTTCACAACAG
CAACAGCAGCAGCAGCAATCGCCGCTGTTTCAGCAGCGAGGCGCCGCAGGATTCGGTTTCCAGACTCCGTTTGCAGCGCCTCAGTCCAGTCCATTTCTAAATGCTCAACT
GATCACTCAGATGGCGCCGGTGGCACCGCTTCCTTTCTGCCTGGCTGATCGAGATATTCAAGCAATTGTTGAGGCATACAAGGACGACGCAGGAAACCCTAAGTATGCCT
TCAAGCATTTGTTGTTCAGTGTAACTGATCCTCAATATAGGGCGAAGCCTGCAGGTGTATCGGATACAATGTGGGCTGAGGCAATGGCAAAACTAGAAGGCATGGAAAGT
GCGGATAGAGAGCGATTGTGGCCACAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGATTCAAGATGAAGTCATTCTCGCTGATGCTGAGAGGCTGCGGAT
GACCCAAAGCAATGTCAAAATGCTTCAGAGGCACTTTCTAGCTGATACTCTACCATGGGTTCAAAGATTGAAACAGAAGGAGCAAGGTCTTCAAAGGCGTCTTTTGAGAG
TCATGAGAATTGTGGAGGCACTAGAAAGTAAGGGTTGCCGAGTGCCTGTAATGAAAGGAGAGGCTGAATTGGCAGAGAAGTTAAGTTTGATAACGAGGCAGTTCAAAGAA
TCTGGGGCAGAGCTTTCAAGAAGGGTGCAAAATTTGCTTATGATTACTCGTGGCCAACCAAATGGCTCCGGTGCTGGTAATTCCATCTATCTTCAAGGATCTGCAAAAAT
ACACGAACAGAGTCTTGCTGATATGCAGGAGGTTTTGCAGCAGCAGACGGAGGCCATTGCTAGACTTGGAACTGTGTTAAAGCGAGACGTTAGAGACATGGAAATCATAA
TGGCTGAAGACAAAGAGATGACAGATGATCCGAGTTAA
mRNA sequenceShow/hide mRNA sequence
TGATTCAATGCCCTAGACTAGACTTCCCATCCTCACTTGAACCTCAACTCTGAAAACCTGAGAGACGCATTTCCCTCGAGCTCAAGTTTCGATTCTCAAATGGCGATTTC
GGTTTGAGACGTTAGGGTTCCTCTTTGACGCTTCACTGCATATACAATGTTCGGAGCTCAACAGTCCTCCTCCGCCTTCGGCACTCCACAATCAACTCCGGCCTTTGGCA
CTCTGCAATCAACTCCGGCCTTTGGCACTCTGCAATCAACTCCGGCCTTTGGCACTCCGCAGACAACTCCGGTATTTGGCACTCCACAATCGACTCCAGCATTTAGCACG
CTGGCGTCCACTCCTGCCTTCGGAACTTCATCGGCATCTCCCGCATTCGGAAACCTTTCAACTCCTGCCTTCGGAACTCCATCTACATCGTCTTTTGCCACCGGCTTCGG
TTCGTCTCTCTTCTCCACTCCATTCTCTTCTCAGCCTTCACAACAGCAACAGCAGCAGCAGCAATCGCCGCTGTTTCAGCAGCGAGGCGCCGCAGGATTCGGTTTCCAGA
CTCCGTTTGCAGCGCCTCAGTCCAGTCCATTTCTAAATGCTCAACTGATCACTCAGATGGCGCCGGTGGCACCGCTTCCTTTCTGCCTGGCTGATCGAGATATTCAAGCA
ATTGTTGAGGCATACAAGGACGACGCAGGAAACCCTAAGTATGCCTTCAAGCATTTGTTGTTCAGTGTAACTGATCCTCAATATAGGGCGAAGCCTGCAGGTGTATCGGA
TACAATGTGGGCTGAGGCAATGGCAAAACTAGAAGGCATGGAAAGTGCGGATAGAGAGCGATTGTGGCCACAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGA
AGATTCAAGATGAAGTCATTCTCGCTGATGCTGAGAGGCTGCGGATGACCCAAAGCAATGTCAAAATGCTTCAGAGGCACTTTCTAGCTGATACTCTACCATGGGTTCAA
AGATTGAAACAGAAGGAGCAAGGTCTTCAAAGGCGTCTTTTGAGAGTCATGAGAATTGTGGAGGCACTAGAAAGTAAGGGTTGCCGAGTGCCTGTAATGAAAGGAGAGGC
TGAATTGGCAGAGAAGTTAAGTTTGATAACGAGGCAGTTCAAAGAATCTGGGGCAGAGCTTTCAAGAAGGGTGCAAAATTTGCTTATGATTACTCGTGGCCAACCAAATG
GCTCCGGTGCTGGTAATTCCATCTATCTTCAAGGATCTGCAAAAATACACGAACAGAGTCTTGCTGATATGCAGGAGGTTTTGCAGCAGCAGACGGAGGCCATTGCTAGA
CTTGGAACTGTGTTAAAGCGAGACGTTAGAGACATGGAAATCATAATGGCTGAAGACAAAGAGATGACAGATGATCCGAGTTAAAGGGGGGAATTGAATTCACATTTCTA
GCCATTGTTTTGTTTTGTTTTGACATATACTTTGCATGATTTTTCCATCCAAAAGGCAAAATTAAAATCCGTTTTCAAAATTCTTATGTACTGCCCAAGTAATTTTGGAA
CTGCTGGCCGACATCTGTTTTGAGAGATGCTGGTTGGTCAGTACCTTGTTAAGGTAGGTTCAACTTGAACTGCTTAATACCCATGCGATTTTGAATCAATGCAGTGTTGA
AGGCTGAGAACTGTAATCGTTATGAAGCGTGAAACAGTTGCTATGTTGGGTCTCTTAACGTTGCCAGCATTATCATCAGCAAGACCTTGGATTCATCTTTTCCTTTGTCA
GGTGAGGTGACTGACTCTCACACATCAAATATAACCTCTAAAATCTCTTGCATTTGGGGATGTTAGGCCTCTTATTATCTTAAAGCTTTAGGTGTATAGTATGTTCATAG
TTGTTAGGTATGCTTATGTGAGTAAGCCCAACCCTTCGAGGTCAGGTATGTTTATATGAGGGACTTTGGTGGGAATGAAATTTGCTTGGTCACAAACTGGCCAAGGATTT
GGGGGCTGGGGCAAAATCTGGAGAAAGTGCAAACATCACGAATGCTGAGGGAGAACCTTGATATAGGCCAGACTTAAGGGACATCAAAATTTTTATGTGAAAAATTGAAT
TCGCATCTCGTAACGTTGAAATATCAGATTTAGCTTATATATATTGAAACTTTTGTCTTCCAAAGGACGTATTTCTTGTTTAAAAGCTTCCTTATATCTACA
Protein sequenceShow/hide protein sequence
MFGAQQSSSAFGTPQSTPAFGTLQSTPAFGTLQSTPAFGTPQTTPVFGTPQSTPAFSTLASTPAFGTSSASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQQ
QQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFLNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMES
ADRERLWPQLVQGFKDLSQRLKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEALESKGCRVPVMKGEAELAEKLSLITRQFKE
SGAELSRRVQNLLMITRGQPNGSGAGNSIYLQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDMEIIMAEDKEMTDDPS