; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G019300 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G019300
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRibosomal protein L22p/L17e family protein isoform 1
Genome locationCmo_Chr04:9859334..9860734
RNA-Seq ExpressionCmoCh04G019300
SyntenyCmoCh04G019300
Gene Ontology termsNA
InterPro domainsIPR035204 - NADH-ubiquinone oxidoreductase 11kDa subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648679.1 hypothetical protein Csa_008887 [Cucumis sativus]1.7e-4676.86Show/hide
Query:  LIFTEEEILIPAIDFR-------------EMKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQIS
        L FTEEEI IPAIDFR             EMKFIMEFAE+LVLRLMEDPKERDR+FREH+YA+KDRCQKTKEMWSYP+RPYGFWTF+RHN QL+WD QIS
Subjt:  LIFTEEEILIPAIDFR-------------EMKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQIS

Query:  QVPGRRDPYDDLLTDINNNSK
        QVPGRRDPYDD+L D NN+SK
Subjt:  QVPGRRDPYDDLLTDINNNSK

KAG7012731.1 hypothetical protein SDJN02_25484, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-4572.31Show/hide
Query:  MANCWLIFTEEEILIP--------------AIDFR---EMKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNC
        + NCWL  T EEI IP               + FR   EMKFIMEFAENLVLR+MEDPKERDRKFRE +YAVKDRCQKTKEMWSYP+RPYGFWTF+RHN 
Subjt:  MANCWLIFTEEEILIP--------------AIDFR---EMKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNC

Query:  QLRWDAQISQVPGRRDPYDDLLTDINNNSK
        QL WDAQISQVPGRRDPYDD+L DI+NNSK
Subjt:  QLRWDAQISQVPGRRDPYDDLLTDINNNSK

XP_022151828.1 uncharacterized protein LOC111019716 [Momordica charantia]3.9e-4390.11Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKF+MEFAENLV+RLMEDPKERDRKFREH+YAVKDRCQKTKEMWSYP+RPYGFWTFERHN QL+WDAQISQ PGRRDPYDD+L DINNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK

XP_022956462.1 uncharacterized protein LOC111458190 [Cucurbita moschata]3.4e-47100Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK

XP_038891434.1 uncharacterized protein LOC120080854 [Benincasa hispida]1.3e-4391.21Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKF+MEFAENLVLRLMEDPKERDRKFREH+YAVKDRCQKTKEMWSYP+RPYGFWTFERHN QL+WDAQISQ PGRRDPYDD+L DINNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK

TrEMBL top hitse value%identityAlignment
A0A1S3BE41 uncharacterized protein LOC1034888887.9e-4289.01Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKFIMEFAE+LVLRLMEDPKERDR+FREHVYAVKDRCQKTKEMWS P+RPYGFWTF+RHN QL+WD QISQVPGRRDPYDDLL D NNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK

A0A5A7SSK1 Uncharacterized protein7.9e-4289.01Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKFIMEFAE+LVLRLMEDPKERDR+FREHVYAVKDRCQKTKEMWS P+RPYGFWTF+RHN QL+WD QISQVPGRRDPYDDLL D NNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK

A0A6J1DD92 uncharacterized protein LOC1110197161.9e-4390.11Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKF+MEFAENLV+RLMEDPKERDRKFREH+YAVKDRCQKTKEMWSYP+RPYGFWTFERHN QL+WDAQISQ PGRRDPYDD+L DINNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK

A0A6J1GWE2 uncharacterized protein LOC1114581901.6e-47100Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK

A0A6J1K907 uncharacterized protein LOC1114933471.6e-47100Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67350.1 unknown protein4.4e-3780Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTD
        M FIMEFAENLVLRLME+P+ERDRK REH+Y + +RC+K KEMW+ PIRPYGFWTFERHN QLRWD QISQV GRRDPYDDLL D
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTD

AT1G67350.2 unknown protein4.4e-3780Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTD
        M FIMEFAENLVLRLME+P+ERDRK REH+Y + +RC+K KEMW+ PIRPYGFWTFERHN QLRWD QISQV GRRDPYDDLL D
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACTGCTGGCTGATATTTACCGAGGAAGAAATCTTAATTCCTGCAATCGATTTTCGAGAAATGAAGTTCATCATGGAGTTTGCTGAGAATTTGGTACTAAGACT
CATGGAGGATCCAAAAGAGAGGGATCGGAAGTTCCGGGAGCACGTATATGCGGTGAAGGATCGATGCCAAAAGACGAAGGAGATGTGGAGCTATCCAATCCGTCCTTACG
GATTTTGGACATTTGAGCGCCACAATTGTCAGCTGCGGTGGGACGCACAAATTAGTCAGGTTCCTGGTAGGAGGGATCCTTACGATGATTTGCTTACGGACATCAACAAT
AACTCCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAACTGCTGGCTGATATTTACCGAGGAAGAAATCTTAATTCCTGCAATCGATTTTCGAGAAATGAAGTTCATCATGGAGTTTGCTGAGAATTTGGTACTAAGACT
CATGGAGGATCCAAAAGAGAGGGATCGGAAGTTCCGGGAGCACGTATATGCGGTGAAGGATCGATGCCAAAAGACGAAGGAGATGTGGAGCTATCCAATCCGTCCTTACG
GATTTTGGACATTTGAGCGCCACAATTGTCAGCTGCGGTGGGACGCACAAATTAGTCAGGTTCCTGGTAGGAGGGATCCTTACGATGATTTGCTTACGGACATCAACAAT
AACTCCAAGTGATAAGTGAAGGATGTTTGGTAGAGCTCTGAAATCTGTGGTGGTATCTGGGAAGCTCCCAAGCAATTGTTTGAACGTTTATTTTGTTGTTGTTTAAACTG
GACAAGTACCTTGTGGTTTGTATTGTCAAACGGAGATTTTGGTGCTGGAATAAACGTGCTTTTTAGCTCATAAGATATATTTCAAGCTGGTGAATTTGAGCACATTGTTT
TTCTAATGCCCTCATCGGATGCATTTTTCATTATTTATATCCATATATCGCCCGATACGGTTCAAATTTATTGCAAACTATCA
Protein sequenceShow/hide protein sequence
MANCWLIFTEEEILIPAIDFREMKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINN
NSK