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CmoCh04G019340 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G019340
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCmo_Chr04:9875018..9875381
RNA-Seq ExpressionCmoCh04G019340
SyntenyCmoCh04G019340
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009521 - photosystem (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK15728.1 chlorophyll a-b binding protein 7 [Cucumis melo var. makuwa]1.3e-0967.06Show/hide
Query:  GDLGGDGAAGSRATAAAAEHAAGARAGTAADVAVGPAGAEAGDSTGAVAGGAAGGGAGHGF-VHHGFDEDGAGEDAEAGGELGED
        GDL G  AAG+ A  AAAEH   A AG AADV+VGPAGAE GD+  AVAG AAG GAGHG  VH GFDEDGAGEDAEA     E+
Subjt:  GDLGGDGAAGSRATAAAAEHAAGARAGTAADVAVGPAGAEAGDSTGAVAGGAAGGGAGHGF-VHHGFDEDGAGEDAEAGGELGED
TrEMBL top hitse value%identityAlignment
A0A5D3CWU8 Chlorophyll a-b binding protein, chloroplastic6.4e-1067.06Show/hide
Query:  GDLGGDGAAGSRATAAAAEHAAGARAGTAADVAVGPAGAEAGDSTGAVAGGAAGGGAGHGF-VHHGFDEDGAGEDAEAGGELGED
        GDL G  AAG+ A  AAAEH   A AG AADV+VGPAGAE GD+  AVAG AAG GAGHG  VH GFDEDGAGEDAEA     E+
Subjt:  GDLGGDGAAGSRATAAAAEHAAGARAGTAADVAVGPAGAEAGDSTGAVAGGAAGGGAGHGF-VHHGFDEDGAGEDAEAGGELGED
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGAAGAGAGAATATTACATGGCGGAGGGGAGAGGGGGGGAATTGGGAATCAGGAGGAAGAGGGGGGATAATTGGTACGGCGGACGGAGATTTGGGCGGGGATGG
GGCGGCCGGTTCCAGAGCCACCGCAGCTGCTGCAGAACATGCGGCCGGAGCCAGAGCAGGTACGGCAGCCGATGTCGCGGTCGGACCAGCGGGAGCAGAGGCAGGGGACT
CGACCGGTGCCGTTGCAGGAGGGGCAGCGGGGGGAGGAGCCGGCCATGGGTTTGTCCATCACGGATTTGACGAGGACGGCGCCGGCGAGGACGCTGAGGCCGGTGGCGAG
TTGGGTGAGGACGATCGGAACCATGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGAAGAGAGAATATTACATGGCGGAGGGGAGAGGGGGGGAATTGGGAATCAGGAGGAAGAGGGGGGATAATTGGTACGGCGGACGGAGATTTGGGCGGGGATGG
GGCGGCCGGTTCCAGAGCCACCGCAGCTGCTGCAGAACATGCGGCCGGAGCCAGAGCAGGTACGGCAGCCGATGTCGCGGTCGGACCAGCGGGAGCAGAGGCAGGGGACT
CGACCGGTGCCGTTGCAGGAGGGGCAGCGGGGGGAGGAGCCGGCCATGGGTTTGTCCATCACGGATTTGACGAGGACGGCGCCGGCGAGGACGCTGAGGCCGGTGGCGAG
TTGGGTGAGGACGATCGGAACCATGGTTGA
Protein sequenceShow/hide protein sequence
MVGRENITWRRGEGGNWESGGRGGIIGTADGDLGGDGAAGSRATAAAAEHAAGARAGTAADVAVGPAGAEAGDSTGAVAGGAAGGGAGHGFVHHGFDEDGAGEDAEAGGE
LGEDDRNHG