CuGenDBv2

Gene ID	CmoCh04G019350
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Genome location	Cmo_Chr04:9875076..9875375
RNA-Seq Expression	CmoCh04G019350
Synteny	CmoCh04G019350
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008446034.1 PREDICTED: uncharacterized protein LOC103488885 [Cucumis melo]

7.6e-43

Show/hide

Query:  MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS
        MVPIVL+QLATGLSVLAGAVLVKSVMD KPMAGS PRCPSCNGTGRVPCLCSRWSD DIGCRTCSGSGRMFCSSCGGSGTGRP+PAQIS+RR+NYP SSS
Subjt:  MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS

XP_011655560.2 uncharacterized protein LOC105435558 [Cucumis sativus]

1.3e-42

Show/hide

Query:  MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS
        MVPIVL+QLATGLSVLAGAVLVKSVMD KPMAGS PRCPSCNG+GRVPCLCSRWSD DIGCRTCSGSGRMFCSSCGGSGTGRPIP+QISVRR+NYP SSS
Subjt:  MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS

XP_022957100.1 uncharacterized protein LOC111458584 [Cucurbita moschata]

3.5e-48

100

Show/hide

Query:  MVPIVLTQLATGLSVLAGAVLVKSVMDKPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS
        MVPIVLTQLATGLSVLAGAVLVKSVMDKPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS
Subjt:  MVPIVLTQLATGLSVLAGAVLVKSVMDKPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS

XP_023552719.1 uncharacterized protein LOC111810279 [Cucurbita pepo subsp. pepo]

2.3e-47

97.98

Show/hide

Query:  MVPIVLTQLATGLSVLAGAVLVKSVMDKPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS
        MVP+VLTQLATGLSVLAGAVLVKSVMDKPMAGS PRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS
Subjt:  MVPIVLTQLATGLSVLAGAVLVKSVMDKPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS

XP_038892730.1 uncharacterized protein LOC120081711 [Benincasa hispida]

6.9e-44

Show/hide

Query:  MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS
        MVPIVLTQLATGLSVLAGAVLVKSVMD KPMAGS PRCPSCNGTGRVPCLCSRWSD DIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRR+NYP SSS
Subjt:  MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPV9 Uncharacterized protein

1.2e-41

Show/hide

Query:  MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS
        MVPIVL+QLATGLSVLAGAVLVKSVMD KPMAGS PRCPSCNG+GRVPCLCSRWSD DIG RTCSGSGRMFCSSCGGSGTGRPIP+QISVRR+NYP SSS
Subjt:  MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS

A0A1S3BEY5 uncharacterized protein LOC103488885

3.7e-43

Show/hide

Query:  MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS
        MVPIVL+QLATGLSVLAGAVLVKSVMD KPMAGS PRCPSCNGTGRVPCLCSRWSD DIGCRTCSGSGRMFCSSCGGSGTGRP+PAQIS+RR+NYP SSS
Subjt:  MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS

A0A6J1DG38 uncharacterized protein LOC111019780

4.5e-41

88.89

Show/hide

Query:  MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSS
        MVP+VLTQLATGLSVLAGAVLVKSVMD KPMAG  PRCPSCNGTGRV CLCSRWSD D+GCRTCSGSGRMFCSSCGG+GTGRPIPAQ+SVRRTN+P SS
Subjt:  MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSS

A0A6J1GZK6 uncharacterized protein LOC111458584

1.7e-48

100

Show/hide

Query:  MVPIVLTQLATGLSVLAGAVLVKSVMDKPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS
        MVPIVLTQLATGLSVLAGAVLVKSVMDKPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS
Subjt:  MVPIVLTQLATGLSVLAGAVLVKSVMDKPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS

A0A6J1K8V1 uncharacterized protein LOC111493328

1.7e-48

100

Show/hide

Query:  MVPIVLTQLATGLSVLAGAVLVKSVMDKPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS
        MVPIVLTQLATGLSVLAGAVLVKSVMDKPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS
Subjt:  MVPIVLTQLATGLSVLAGAVLVKSVMDKPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G43260.1 chaperone protein dnaJ-related

5.1e-37

76.04

Show/hide

Query:  MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYP
        M PIV+TQLATG+SVLAGAV +KSVMD KPMAG  PRCP+CNGTGRV C CSRWSD D+GCR CSGSGR  CS+CGGSGTGRP+PAQI+V+  N P
Subjt:  MVPIVLTQLATGLSVLAGAVLVKSVMD-KPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTTCCGATCGTCCTCACCCAACTCGCCACCGGCCTCAGCGTCCTCGCCGGCGCCGTCCTCGTCAAATCCGTGATGGACAAACCCATGGCCGGCTCCTCCCCCCGCTG
CCCCTCCTGCAACGGCACCGGTCGAGTCCCCTGCCTCTGCTCCCGCTGGTCCGACCGCGACATCGGCTGCCGTACCTGCTCTGGCTCCGGCCGCATGTTCTGCAGCAGCT
GCGGTGGCTCTGGAACCGGCCGCCCCATCCCCGCCCAAATCTCCGTCCGCCGTACCAATTATCCCCCCTCTTCCTCCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVPIVLTQLATGLSVLAGAVLVKSVMDKPMAGSSPRCPSCNGTGRVPCLCSRWSDRDIGCRTCSGSGRMFCSSCGGSGTGRPIPAQISVRRTNYPPSSS

CmoCh04G019350 (gene) of Cucurbita moschata (Rifu) v1 genome