CuGenDBv2

Gene ID	CmoCh04G020320
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	calmodulin-like
Genome location	Cmo_Chr04:11002770..11003201
RNA-Seq Expression	CmoCh04G020320
Synteny	CmoCh04G020320
Gene Ontology terms	GO:0005509 - calcium ion binding (molecular function)
InterPro domains	IPR002048 - EF-hand domain IPR011992 - EF-hand domain pair IPR018247 - EF-Hand 1, calcium-binding site

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022930007.1 uncharacterized protein LOC111436449 [Cucurbita moschata]

4.4e-68

93.71

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Query:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL
        MAKYEASELIKKYPRNGD VQLKSF  I RDSTQLNNQGKIPEILKDNKNVGLKLSSN HPKT KLQF+REQMKEIF+YHDSDKDGFLNLRELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK
        GSIIPFEKASYGMSYADANKDGLISE ELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK

XP_022930014.1 calmodulin-like [Cucurbita moschata]

7.0e-74

100

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Query:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL
        MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK
        GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK

XP_022994536.1 calmodulin-2/4-like [Cucurbita maxima]

6.8e-69

93.71

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Query:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL
        MAKYEASE+IKKYPRNGD VQLKSFGGITRDSTQ+NNQGKI EILKDNKNVGLKLSSNTHPKT KLQF+REQMKEIFRYHDSDKDGFLN+RELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK
        GSIIPFEKASYGMSYADANKDGLI E ELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK

XP_023530717.1 calmodulin-2/4-like [Cucurbita pepo subsp. pepo]

6.8e-69

94.41

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Query:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL
        MAKYEASELIKKYPRNGD VQLKSF GI RDSTQLNNQGKIPEILKDNKNVGLKLSSN HPKT KLQF+REQMKEIFRYHDSDKDGFLNLRELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK
        GSIIPFEKASYGM+YADANKDGLISE ELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK

XP_023530727.1 calmodulin-like protein 1 [Cucurbita pepo subsp. pepo]

2.1e-65

90.91

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Query:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL
        MAKYEASE+IKK+ RNGD VQL+SF GI RDSTQLNNQGKI EILKDNKNVGLKLSSN HPKT KLQF+REQMKEIFRYHD+DKDGFLNLRELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK
        GSIIPFEKASYGMSYADANKDGLISE ELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EP67 uncharacterized protein LOC111436449

2.1e-68

93.71

Show/hide

Query:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL
        MAKYEASELIKKYPRNGD VQLKSF  I RDSTQLNNQGKIPEILKDNKNVGLKLSSN HPKT KLQF+REQMKEIF+YHDSDKDGFLNLRELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK
        GSIIPFEKASYGMSYADANKDGLISE ELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK

A0A6J1EP72 calmodulin-2/4-like

6.2e-60

81.82

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Query:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL
        MAKYEASE+IKK  RNGD VQLK+F GI R STQ+NNQ  +PEIL+DNKNVG K SSNTH K   +QF+REQMKEIFRYHDSDKDGFLN+RELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK
        GSIIPFEKASYGM+YADANKDGLISE ELDKL+DYAQKF+KKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK

A0A6J1EQE8 calmodulin-like

3.4e-74

100

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Query:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL
        MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK
        GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK

A0A6J1EQF3 calcium-binding protein CML38-like

1.7e-57

79.72

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Query:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL
        MAKYEASE+IKK  RNGD VQLK+F GI R STQ+NNQG +PEI +DNKNVG KLSSNT  K   +QF+RE +KEIF+YHDSDKDGFLNLRELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK
        GSIIPFEK SYGM+YADA+KDGLISE ELDKLIDYAQKF+KKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK

A0A6J1JZF1 calmodulin-2/4-like

3.3e-69

93.71

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Query:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL
        MAKYEASE+IKKYPRNGD VQLKSFGGITRDSTQ+NNQGKI EILKDNKNVGLKLSSNTHPKT KLQF+REQMKEIFRYHDSDKDGFLN+RELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK
        GSIIPFEKASYGMSYADANKDGLI E ELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK

SwissProt top hits

e value

%identity

Alignment

Q9LQN4 Probable calcium-binding protein CML17

8.0e-04

27.33

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Query:  EASELIKKYPRNGD--------GVQLKSFGG----------ITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDG
        E  E+ + + RN D        G  L++ G           I +  T+ N   + PE +     V  +L S     TP   +T EQ+  +FR  D+D +G
Subjt:  EASELIKKYPRNGD--------GVQLKSFGG----------ITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDG

Query:  FLNLRELTKAFAFLGSIIPFEKASYGMSYADANKDGLISETELDKLIDYA
        F+   EL  + A LG  +   + +  +  AD++ DG I+  E  K I+ A
Subjt:  FLNLRELTKAFAFLGSIIPFEKASYGMSYADANKDGLISETELDKLIDYA

Q9M8U1 Probable calcium-binding protein CML18

5.5e-05

26.62

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Query:  EASELIKKYPRNGDGVQLK-SFGGITRDSTQLNNQGKIPEILK--DNKNVGL----KLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAF
        E  E+ + + +N DG   +   G + R      +Q ++  +++  D  N GL    +  +   P   K  +T +Q+K IFR  D D +G++   EL  + 
Subjt:  EASELIKKYPRNGDGVQLK-SFGGITRDSTQLNNQGKIPEILK--DNKNVGL----KLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAF

Query:  AFLGSIIPFEKASYGMSYADANKDGLISETELDKLIDYA
        A LG  +  E+ +  +  AD + DG I   E  + I  A
Subjt:  AFLGSIIPFEKASYGMSYADANKDGLISETELDKLIDYA

Arabidopsis top hits

e value

%identity

Alignment

AT1G32250.1 Calcium-binding EF-hand family protein

5.7e-05

27.33

Show/hide

Query:  EASELIKKYPRNGD--------GVQLKSFGG----------ITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDG
        E  E+ + + RN D        G  L++ G           I +  T+ N   + PE +     V  +L S     TP   +T EQ+  +FR  D+D +G
Subjt:  EASELIKKYPRNGD--------GVQLKSFGG----------ITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDG

Query:  FLNLRELTKAFAFLGSIIPFEKASYGMSYADANKDGLISETELDKLIDYA
        F+   EL  + A LG  +   + +  +  AD++ DG I+  E  K I+ A
Subjt:  FLNLRELTKAFAFLGSIIPFEKASYGMSYADANKDGLISETELDKLIDYA

AT3G03000.1 EF hand calcium-binding protein family

3.9e-06

26.62

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Query:  EASELIKKYPRNGDGVQLK-SFGGITRDSTQLNNQGKIPEILK--DNKNVGL----KLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAF
        E  E+ + + +N DG   +   G + R      +Q ++  +++  D  N GL    +  +   P   K  +T +Q+K IFR  D D +G++   EL  + 
Subjt:  EASELIKKYPRNGDGVQLK-SFGGITRDSTQLNNQGKIPEILK--DNKNVGL----KLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAF

Query:  AFLGSIIPFEKASYGMSYADANKDGLISETELDKLIDYA
        A LG  +  E+ +  +  AD + DG I   E  + I  A
Subjt:  AFLGSIIPFEKASYGMSYADANKDGLISETELDKLIDYA

Sequences

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CDS sequence

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ATGGCTAAGTATGAAGCAAGTGAGTTGATCAAGAAGTATCCAAGAAATGGTGATGGTGTTCAACTAAAATCTTTCGGTGGCATTACTCGAGATTCAACTCAACTCAACAA
TCAAGGCAAGATACCAGAAATCTTAAAAGATAACAAGAATGTTGGGCTCAAGCTTAGTTCAAATACTCACCCAAAGACACCTAAGTTGCAATTTACTCGAGAGCAGATGA
AGGAGATCTTTAGATATCATGATAGCGACAAGGATGGTTTTCTCAATTTAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTATTCCATTTGAGAAAGCTTCC
TACGGCATGTCATATGCTGATGCAAATAAAGATGGCCTTATCAGCGAGACTGAACTTGACAAACTCATTGATTATGCCCAGAAATTTGTGAAGAAGAAATGA

mRNA sequence

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Protein sequence

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MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTHPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFLGSIIPFEKAS
YGMSYADANKDGLISETELDKLIDYAQKFVKKK

CmoCh04G020320 (gene) of Cucurbita moschata (Rifu) v1 genome