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CmoCh04G020340 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G020340
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncalmodulin-2/4-like
Genome locationCmo_Chr04:11042818..11043332
RNA-Seq ExpressionCmoCh04G020340
SyntenyCmoCh04G020340
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022930007.1 uncharacterized protein LOC111436449 [Cucurbita moschata]1.9e-4189.9Show/hide
Query:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK
        L   +NVGLKLSSN HPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLG+IIPFEKASY M+YADANKDGLISEAELDKL+DYAQKF+KKK
Subjt:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK

XP_022930014.1 calmodulin-like [Cucurbita moschata]2.7e-4086.87Show/hide
Query:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK
        L   +NVGLKLSSNTHPKT KLQF+REQMKEIF+YHDSDKDGFLNLRELTKAFAFLG+IIPFEKASY M+YADANKDGLISE ELDKL+DYAQKF+KKK
Subjt:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK

XP_022994536.1 calmodulin-2/4-like [Cucurbita maxima]5.5e-4187.88Show/hide
Query:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK
        L   +NVGLKLSSNTHPKTSKLQFSREQMKEIF+YHDSDKDGFLN+RELTKAFAFLG+IIPFEKASY M+YADANKDGLI EAELDKL+DYAQKF+KKK
Subjt:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK

XP_023530717.1 calmodulin-2/4-like [Cucurbita pepo subsp. pepo]1.4e-4189.9Show/hide
Query:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK
        L   +NVGLKLSSN HPKTSKLQFSREQMKEIF+YHDSDKDGFLNLRELTKAFAFLG+IIPFEKASY MTYADANKDGLISEAELDKL+DYAQKF+KKK
Subjt:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK

XP_023530727.1 calmodulin-like protein 1 [Cucurbita pepo subsp. pepo]9.3e-4186.27Show/hide
Query:  LSWLSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMK
        L  L   +NVGLKLSSN HPKTSKLQFSREQMKEIF+YHD+DKDGFLNLRELTKAFAFLG+IIPFEKASY M+YADANKDGLISEAELDKL+DYAQKF+K
Subjt:  LSWLSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMK

Query:  KK
        KK
Subjt:  KK

TrEMBL top hitse value%identityAlignment
A0A6J1EP67 uncharacterized protein LOC1114364499.1e-4289.9Show/hide
Query:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK
        L   +NVGLKLSSN HPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLG+IIPFEKASY M+YADANKDGLISEAELDKL+DYAQKF+KKK
Subjt:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK

A0A6J1EP72 calmodulin-2/4-like2.1e-3884.85Show/hide
Query:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK
        L   +NVG K SSNTH K S +QFSREQMKEIF+YHDSDKDGFLN+RELTKAFAFLG+IIPFEKASY MTYADANKDGLISEAELDKLVDYAQKF+KKK
Subjt:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK

A0A6J1EQE8 calmodulin-like1.3e-4086.87Show/hide
Query:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK
        L   +NVGLKLSSNTHPKT KLQF+REQMKEIF+YHDSDKDGFLNLRELTKAFAFLG+IIPFEKASY M+YADANKDGLISE ELDKL+DYAQKF+KKK
Subjt:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK

A0A6J1EQF3 calcium-binding protein CML38-like2.6e-3684.21Show/hide
Query:  QNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK
        +NVG KLSSNT  K S +QFSRE +KEIFKYHDSDKDGFLNLRELTKAFAFLG+IIPFEK SY MTYADA+KDGLISE ELDKL+DYAQKFMKKK
Subjt:  QNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK

A0A6J1JZF1 calmodulin-2/4-like2.6e-4187.88Show/hide
Query:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK
        L   +NVGLKLSSNTHPKTSKLQFSREQMKEIF+YHDSDKDGFLN+RELTKAFAFLG+IIPFEKASY M+YADANKDGLI EAELDKL+DYAQKF+KKK
Subjt:  LSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGLISEAELDKLVDYAQKFMKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTGAGGTTTTTTCATCTTCAACCTTTCCTTACAAACAAATATAGCATTGGTATAGCAATGTTTATCACCAAACTTCCACTTTCATGGCTAAGTAAGAAGCAAAA
TGTTGGGCTCAAGCTTAGTTCAAATACTCACCCAAAGACATCTAAGTTGCAATTTAGTCGAGAACAGATGAAGGAGATCTTTAAATATCATGATAGCGATAAAGATGGTT
TTCTCAATTTAAGGGAGTTAACAAAAGCTTTTGCTTTCCTAGGCACAATTATCCCATTTGAGAAAGCTTCGTATGACATGACATATGCTGATGCAAATAAAGATGGTCTT
ATTAGCGAGGCTGAACTTGACAAACTCGTTGATTATGCTCAGAAATTTATGAAGAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTGAGGTTTTTTCATCTTCAACCTTTCCTTACAAACAAATATAGCATTGGTATAGCAATGTTTATCACCAAACTTCCACTTTCATGGCTAAGTAAGAAGCAAAA
TGTTGGGCTCAAGCTTAGTTCAAATACTCACCCAAAGACATCTAAGTTGCAATTTAGTCGAGAACAGATGAAGGAGATCTTTAAATATCATGATAGCGATAAAGATGGTT
TTCTCAATTTAAGGGAGTTAACAAAAGCTTTTGCTTTCCTAGGCACAATTATCCCATTTGAGAAAGCTTCGTATGACATGACATATGCTGATGCAAATAAAGATGGTCTT
ATTAGCGAGGCTGAACTTGACAAACTCGTTGATTATGCTCAGAAATTTATGAAGAAAAAATGA
Protein sequenceShow/hide protein sequence
MGLRFFHLQPFLTNKYSIGIAMFITKLPLSWLSKKQNVGLKLSSNTHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGTIIPFEKASYDMTYADANKDGL
ISEAELDKLVDYAQKFMKKK