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CmoCh04G020350 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G020350
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncalmodulin-like
Genome locationCmo_Chr04:11045870..11046289
RNA-Seq ExpressionCmoCh04G020350
SyntenyCmoCh04G020350
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022930012.1 calmodulin-2/4-like [Cucurbita moschata]4.0e-5884.62Show/hide
Query:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL
        MAKYEASEMIKK TRNGDNVQLK F+ IARASTQVNNQ MVP+I RDNKNVGPK SSNT LK SNMQFSREQMKEIF+YHDSDKDGFLN+RELTKAFAFL
Subjt:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL

Query:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK
        GSIIPFEKASY MT    +KD LISEAELDKL+DY QKF+KKK
Subjt:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK

XP_022930019.1 calcium-binding protein CML38-like [Cucurbita moschata]2.8e-5987.41Show/hide
Query:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL
        MAKYEASEMIKK TRNGDNVQLK FS IARASTQVNNQ MVP+IFRDNKNVGPKLSSNTQLK SNMQFSRE +KEIFKYHDSDKDGFLN+RELTKAFAFL
Subjt:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL

Query:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK
        GSIIPFEK SY MT    DKD LISE ELDKLIDY QKFMKKK
Subjt:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK

XP_023513331.1 calmodulin-like [Cucurbita pepo subsp. pepo]7.6e-5784.62Show/hide
Query:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL
        + KYEASEMIKK TRNGDNVQLK F  IA+ASTQVNNQ MV +I RDNKNVGPKLSSNTQLK+SNMQFSREQMKEIFKYHDSDKDGF N+RELTKAFAFL
Subjt:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL

Query:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK
        GSIIPFEKASY +T    DKD LISEAELDKLIDY QKFMKKK
Subjt:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK

XP_023530717.1 calmodulin-2/4-like [Cucurbita pepo subsp. pepo]7.4e-5278.32Show/hide
Query:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL
        MAKYEASE+IKK  RNGD+VQLK+FS IAR STQ+NNQ  +P+I +DNKNVG KLSSN   KTS +QFSREQMKEIF+YHDSDKDGFLN+RELTKAFAFL
Subjt:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL

Query:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK
        GSIIPFEKASY MT    +KD LISEAELDKLIDY QKF+KKK
Subjt:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK

XP_023530739.1 calmodulin-2/4-like [Cucurbita pepo subsp. pepo]9.0e-5884.62Show/hide
Query:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL
        MAKYEASEMIKK TRNGDNVQLK F+ IARASTQVNNQ MVP+I RDNKNVGPK SSNT LK SNMQFSRE+MKEIF+YHDSDKDGFLN+RELTKAFAFL
Subjt:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL

Query:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK
        GSIIPFEKASY MT    +KD LISEAELDKL+DY QKFMKKK
Subjt:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK

TrEMBL top hitse value%identityAlignment
A0A6J1EP67 uncharacterized protein LOC1114364497.9e-5278.32Show/hide
Query:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL
        MAKYEASE+IKK  RNGD+VQLK+FS IAR STQ+NNQ  +P+I +DNKNVG KLSSN   KTS +QFSREQMKEIFKYHDSDKDGFLN+RELTKAFAFL
Subjt:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL

Query:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK
        GSIIPFEKASY M+    +KD LISEAELDKLIDY QKF+KKK
Subjt:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK

A0A6J1EP72 calmodulin-2/4-like2.0e-5884.62Show/hide
Query:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL
        MAKYEASEMIKK TRNGDNVQLK F+ IARASTQVNNQ MVP+I RDNKNVGPK SSNT LK SNMQFSREQMKEIF+YHDSDKDGFLN+RELTKAFAFL
Subjt:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL

Query:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK
        GSIIPFEKASY MT    +KD LISEAELDKL+DY QKF+KKK
Subjt:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK

A0A6J1EQE8 calmodulin-like7.4e-5074.83Show/hide
Query:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL
        MAKYEASE+IKK  RNGD VQLK+F  I R STQ+NNQ  +P+I +DNKNVG KLSSNT  KT  +QF+REQMKEIF+YHDSDKDGFLN+RELTKAFAFL
Subjt:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL

Query:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK
        GSIIPFEKASY M+    +KD LISE ELDKLIDY QKF+KKK
Subjt:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK

A0A6J1EQF3 calcium-binding protein CML38-like1.4e-5987.41Show/hide
Query:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL
        MAKYEASEMIKK TRNGDNVQLK FS IARASTQVNNQ MVP+IFRDNKNVGPKLSSNTQLK SNMQFSRE +KEIFKYHDSDKDGFLN+RELTKAFAFL
Subjt:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL

Query:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK
        GSIIPFEK SY MT    DKD LISE ELDKLIDY QKFMKKK
Subjt:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK

A0A6J1JZF1 calmodulin-2/4-like6.7e-5176.92Show/hide
Query:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL
        MAKYEASEMIKK  RNGD+VQLK+F  I R STQVNNQ  + +I +DNKNVG KLSSNT  KTS +QFSREQMKEIF+YHDSDKDGFLN+RELTKAFAFL
Subjt:  MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFL

Query:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK
        GSIIPFEKASY M+    +KD LI EAELDKLIDY QKF+KKK
Subjt:  GSIIPFEKASYDMT----DKDSLISEAELDKLIDYVQKFMKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGTATGAAGCAAGTGAGATGATAAAAAAGTGTACTAGAAATGGTGATAATGTTCAGCTAAAAACTTTTAGTGCCATTGCTCGAGCTTCAACTCAAGTC
AACAATCAAGACATGGTACCGAAAATCTTTAGAGATAATAAGAATGTCGGGCCCAAGCTTAGTTCAAATACTCAACTAAAGACATCTAATATGCAATTTAGTCGA
GAGCAGATGAAGGAGATTTTTAAATATCATGATAGCGACAAGGATGGTTTTCTCAACGTAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTATTCCA
TTTGAGAAAGCTTCCTATGACATGACAGATAAAGATAGCCTTATTAGCGAGGCTGAACTTGACAAACTCATTGATTATGTCCAGAAATTTATGAAGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAGTATGAAGCAAGTGAGATGATAAAAAAGTGTACTAGAAATGGTGATAATGTTCAGCTAAAAACTTTTAGTGCCATTGCTCGAGCTTCAACTCAAGTC
AACAATCAAGACATGGTACCGAAAATCTTTAGAGATAATAAGAATGTCGGGCCCAAGCTTAGTTCAAATACTCAACTAAAGACATCTAATATGCAATTTAGTCGA
GAGCAGATGAAGGAGATTTTTAAATATCATGATAGCGACAAGGATGGTTTTCTCAACGTAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTATTCCA
TTTGAGAAAGCTTCCTATGACATGACAGATAAAGATAGCCTTATTAGCGAGGCTGAACTTGACAAACTCATTGATTATGTCCAGAAATTTATGAAGAAGAAATGA
Protein sequenceShow/hide protein sequence
MAKYEASEMIKKCTRNGDNVQLKTFSAIARASTQVNNQDMVPKIFRDNKNVGPKLSSNTQLKTSNMQFSREQMKEIFKYHDSDKDGFLNVRELTKAFAFLGSIIP
FEKASYDMTDKDSLISEAELDKLIDYVQKFMKKK