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CmoCh04G020360 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G020360
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncalmodulin-like
Genome locationCmo_Chr04:11055966..11056397
RNA-Seq ExpressionCmoCh04G020360
SyntenyCmoCh04G020360
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022930007.1 uncharacterized protein LOC111436449 [Cucurbita moschata]3.9e-72100Show/hide
Query:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL
        MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK
        GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK

XP_022930014.1 calmodulin-like [Cucurbita moschata]2.2e-6793.71Show/hide
Query:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL
        MAKYEASELIKKYPRNGD VQLKSF  I RDSTQLNNQGKIPEILKDNKNVGLKLSSN HPKT KLQF+REQMKEIF+YHDSDKDGFLNLRELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK
        GSIIPFEKASYGMSYADANKDGLISE ELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK

XP_022994536.1 calmodulin-2/4-like [Cucurbita maxima]2.2e-6793.01Show/hide
Query:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL
        MAKYEASE+IKKYPRNGDDVQLKSF  I RDSTQ+NNQGKI EILKDNKNVGLKLSSN HPKTSKLQFSREQMKEIF+YHDSDKDGFLN+RELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK
        GSIIPFEKASYGMSYADANKDGLI EAELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK

XP_023530717.1 calmodulin-2/4-like [Cucurbita pepo subsp. pepo]1.2e-7097.9Show/hide
Query:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL
        MAKYEASELIKKYPRNGDDVQLKSFS IARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIF+YHDSDKDGFLNLRELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK
        GSIIPFEKASYGM+YADANKDGLISEAELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK

XP_023530727.1 calmodulin-like protein 1 [Cucurbita pepo subsp. pepo]1.9e-6693.71Show/hide
Query:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL
        MAKYEASE+IKK+ RNGD+VQL+SFS IARDSTQLNNQGKI EILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIF+YHD+DKDGFLNLRELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK
        GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK

TrEMBL top hitse value%identityAlignment
A0A6J1EP67 uncharacterized protein LOC1114364491.9e-72100Show/hide
Query:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL
        MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK
        GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK

A0A6J1EP72 calmodulin-2/4-like1.4e-5982.52Show/hide
Query:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL
        MAKYEASE+IKK  RNGD+VQLK+F+ IAR STQ+NNQ  +PEIL+DNKNVG K SSN H K S +QFSREQMKEIF+YHDSDKDGFLN+RELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK
        GSIIPFEKASYGM+YADANKDGLISEAELDKL+DYAQKF+KKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK

A0A6J1EQE8 calmodulin-like1.1e-6793.71Show/hide
Query:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL
        MAKYEASELIKKYPRNGD VQLKSF  I RDSTQLNNQGKIPEILKDNKNVGLKLSSN HPKT KLQF+REQMKEIF+YHDSDKDGFLNLRELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK
        GSIIPFEKASYGMSYADANKDGLISE ELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK

A0A6J1EQF3 calcium-binding protein CML38-like1.0e-5781.82Show/hide
Query:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL
        MAKYEASE+IKK  RNGD+VQLK+FS IAR STQ+NNQG +PEI +DNKNVG KLSSN   K S +QFSRE +KEIFKYHDSDKDGFLNLRELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK
        GSIIPFEK SYGM+YADA+KDGLISE ELDKLIDYAQKF+KKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK

A0A6J1JZF1 calmodulin-2/4-like1.1e-6793.01Show/hide
Query:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL
        MAKYEASE+IKKYPRNGDDVQLKSF  I RDSTQ+NNQGKI EILKDNKNVGLKLSSN HPKTSKLQFSREQMKEIF+YHDSDKDGFLN+RELTKAFAFL
Subjt:  MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK
        GSIIPFEKASYGMSYADANKDGLI EAELDKLIDYAQKFVKKK
Subjt:  GSIIPFEKASYGMSYADANKDGLISEAELDKLIDYAQKFVKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGTATGAAGCAAGTGAGTTGATCAAGAAGTATCCAAGAAATGGTGATGATGTTCAACTAAAATCTTTCAGTGACATTGCTCGAGATTCAACTCAACTCAATAA
TCAAGGCAAGATACCAGAAATTCTAAAAGATAACAAGAATGTTGGGCTCAAGCTTAGTTCAAATGCTCACCCAAAGACATCTAAGTTGCAATTTAGTCGAGAGCAGATGA
AGGAGATCTTTAAATATCATGATAGCGATAAGGATGGTTTTCTCAATTTAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTATTCCATTTGAGAAAGCTTCC
TACGGTATGTCATATGCGGATGCAAATAAAGATGGCCTTATCAGCGAGGCTGAACTTGACAAACTCATTGATTATGCTCAGAAATTTGTGAAGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAGTATGAAGCAAGTGAGTTGATCAAGAAGTATCCAAGAAATGGTGATGATGTTCAACTAAAATCTTTCAGTGACATTGCTCGAGATTCAACTCAACTCAATAA
TCAAGGCAAGATACCAGAAATTCTAAAAGATAACAAGAATGTTGGGCTCAAGCTTAGTTCAAATGCTCACCCAAAGACATCTAAGTTGCAATTTAGTCGAGAGCAGATGA
AGGAGATCTTTAAATATCATGATAGCGATAAGGATGGTTTTCTCAATTTAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTATTCCATTTGAGAAAGCTTCC
TACGGTATGTCATATGCGGATGCAAATAAAGATGGCCTTATCAGCGAGGCTGAACTTGACAAACTCATTGATTATGCTCAGAAATTTGTGAAGAAGAAATGA
Protein sequenceShow/hide protein sequence
MAKYEASELIKKYPRNGDDVQLKSFSDIARDSTQLNNQGKIPEILKDNKNVGLKLSSNAHPKTSKLQFSREQMKEIFKYHDSDKDGFLNLRELTKAFAFLGSIIPFEKAS
YGMSYADANKDGLISEAELDKLIDYAQKFVKKK