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CmoCh04G020380 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G020380
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncalmodulin-like
Genome locationCmo_Chr04:11098485..11098943
RNA-Seq ExpressionCmoCh04G020380
SyntenyCmoCh04G020380
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022930012.1 calmodulin-2/4-like [Cucurbita moschata]5.0e-7090.13Show/hide
Query:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR
        MFIPKLQASMAKYEASEMIKK TRNGDNVQLKAF+GIARASTQVNNQ MVPEI RDNKNVGPK SSNT LKASNMQFSRE +KEIF+YHDSDKDGFLN+R
Subjt:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR

Query:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK
        ELTKAFAFLGSIIPFEK SYGMTYADA+KDGLISE ELDKL+DYAQKF+KKK
Subjt:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK

XP_022930019.1 calcium-binding protein CML38-like [Cucurbita moschata]1.5e-77100Show/hide
Query:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR
        MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR
Subjt:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR

Query:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK
        ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK
Subjt:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK

XP_023513331.1 calmodulin-like [Cucurbita pepo subsp. pepo]1.8e-6490.21Show/hide
Query:  MAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLRELTKAFAFL
        + KYEASEMIKK TRNGDNVQLKAF GIA+ASTQVNNQGMV EI RDNKNVGPKLSSNTQLK+SNMQFSRE +KEIFKYHDSDKDGF NLRELTKAFAFL
Subjt:  MAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLRELTKAFAFL

Query:  GSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK
        GSIIPFEK SYG+TYADADKDGLISE ELDKLIDYAQKFMKKK
Subjt:  GSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK

XP_023530717.1 calmodulin-2/4-like [Cucurbita pepo subsp. pepo]1.3e-6282.89Show/hide
Query:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR
        MFI KLQASMAKYEASE+IKK  RNGD+VQLK+FSGIAR STQ+NNQG +PEI +DNKNVG KLSSN   K S +QFSRE +KEIF+YHDSDKDGFLNLR
Subjt:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR

Query:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK
        ELTKAFAFLGSIIPFEK SYGMTYADA+KDGLISE ELDKLIDYAQKF+KKK
Subjt:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK

XP_023530739.1 calmodulin-2/4-like [Cucurbita pepo subsp. pepo]3.5e-7191.45Show/hide
Query:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR
        MFIPKLQASMAKYEASEMIKK TRNGDNVQLKAF+GIARASTQVNNQGMVPEI RDNKNVGPK SSNT LKASNMQFSRE +KEIF+YHDSDKDGFLN+R
Subjt:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR

Query:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK
        ELTKAFAFLGSIIPFEK SYGMTYADA+KDGLISE ELDKL+DYAQKFMKKK
Subjt:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK

TrEMBL top hitse value%identityAlignment
A0A6J1EP67 uncharacterized protein LOC1114364495.4e-6282.24Show/hide
Query:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR
        MFI KLQASMAKYEASE+IKK  RNGD+VQLK+FS IAR STQ+NNQG +PEI +DNKNVG KLSSN   K S +QFSRE +KEIFKYHDSDKDGFLNLR
Subjt:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR

Query:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK
        ELTKAFAFLGSIIPFEK SYGM+YADA+KDGLISE ELDKLIDYAQKF+KKK
Subjt:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK

A0A6J1EP72 calmodulin-2/4-like2.4e-7090.13Show/hide
Query:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR
        MFIPKLQASMAKYEASEMIKK TRNGDNVQLKAF+GIARASTQVNNQ MVPEI RDNKNVGPK SSNT LKASNMQFSRE +KEIF+YHDSDKDGFLN+R
Subjt:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR

Query:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK
        ELTKAFAFLGSIIPFEK SYGMTYADA+KDGLISE ELDKL+DYAQKF+KKK
Subjt:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK

A0A6J1EQE8 calmodulin-like4.6e-6180.26Show/hide
Query:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR
        MFI KLQASMAKYEASE+IKK  RNGD VQLK+F GI R STQ+NNQG +PEI +DNKNVG KLSSNT  K   +QF+RE +KEIF+YHDSDKDGFLNLR
Subjt:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR

Query:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK
        ELTKAFAFLGSIIPFEK SYGM+YADA+KDGLISE ELDKLIDYAQKF+KKK
Subjt:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK

A0A6J1EQF3 calcium-binding protein CML38-like7.1e-78100Show/hide
Query:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR
        MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR
Subjt:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR

Query:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK
        ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK
Subjt:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK

A0A6J1JZF1 calmodulin-2/4-like3.5e-6180.92Show/hide
Query:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR
        MFI KLQASMAKYEASEMIKK  RNGD+VQLK+F GI R STQVNNQG + EI +DNKNVG KLSSNT  K S +QFSRE +KEIF+YHDSDKDGFLN+R
Subjt:  MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLR

Query:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK
        ELTKAFAFLGSIIPFEK SYGM+YADA+KDGLI E ELDKLIDYAQKF+KKK
Subjt:  ELTKAFAFLGSIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATCCCCAAACTTCAAGCTTCCATGGCTAAGTATGAAGCAAGTGAGATGATCAAGAAGCGTACTAGAAATGGTGATAATGTTCAACTAAAAGCTTTTAGTGGCAT
TGCTCGAGCTTCAACTCAAGTCAACAATCAAGGCATGGTACCGGAAATATTTAGAGATAATAAGAATGTCGGGCCCAAGCTTAGTTCAAATACTCAACTAAAGGCATCTA
ATATGCAATTTAGTCGAGAGCATTTGAAGGAGATTTTTAAATATCATGATAGCGACAAGGATGGTTTTCTCAATTTACGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGC
TCAATTATTCCATTTGAGAAAGGTTCCTATGGCATGACATATGCTGATGCAGATAAAGATGGCCTTATTAGCGAGGTTGAACTTGACAAACTCATTGATTATGCCCAGAA
ATTTATGAAGAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCATCCCCAAACTTCAAGCTTCCATGGCTAAGTATGAAGCAAGTGAGATGATCAAGAAGCGTACTAGAAATGGTGATAATGTTCAACTAAAAGCTTTTAGTGGCAT
TGCTCGAGCTTCAACTCAAGTCAACAATCAAGGCATGGTACCGGAAATATTTAGAGATAATAAGAATGTCGGGCCCAAGCTTAGTTCAAATACTCAACTAAAGGCATCTA
ATATGCAATTTAGTCGAGAGCATTTGAAGGAGATTTTTAAATATCATGATAGCGACAAGGATGGTTTTCTCAATTTACGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGC
TCAATTATTCCATTTGAGAAAGGTTCCTATGGCATGACATATGCTGATGCAGATAAAGATGGCCTTATTAGCGAGGTTGAACTTGACAAACTCATTGATTATGCCCAGAA
ATTTATGAAGAAAAAATGA
Protein sequenceShow/hide protein sequence
MFIPKLQASMAKYEASEMIKKRTRNGDNVQLKAFSGIARASTQVNNQGMVPEIFRDNKNVGPKLSSNTQLKASNMQFSREHLKEIFKYHDSDKDGFLNLRELTKAFAFLG
SIIPFEKGSYGMTYADADKDGLISEVELDKLIDYAQKFMKKK