| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0033091.1 putative Gag-pol protein [Cucumis melo var. makuwa] | 1.3e-103 | 35.15 | Show/hide |
Query: DMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKV
D+ D G I +KIDLRSGYHQLRI++S I KT FR+RY HYEF VMSFGLTN LA FM LMN+V K+FLD+FVIVFIDDIL+YSKT +HEEHL +V
Subjt: DMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKV
Query: LTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE--------------------------------------------
L TLR N+L+ KFSKCEFW ++V FLGHVVS + V+PAKIEA+TNWPR +T++E
Subjt: LTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE--------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQ
NMK +VA+FVS+CLVCQQVK RQ+PA LLQ
Subjt: ---------------------------------------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQ
Query: PLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVVVDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM-----------------------------
PLSV WKWE+++MDFI+ LPRT +GYTVIWVVVDRLTK AHF P KSTY+ KW QLY+ E+ +LHGVP+
Subjt: PLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVVVDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM-----------------------------
Query: -------DVQTERLNQILEDMLRACMLDFVSSWDTHLHLIEFVYNNSYQA--------------------------------------------------
D QTERLNQILEDMLRAC+L+F SWD+HLHL+EF YNNSY+
Subjt: -------DVQTERLNQILEDMLRACMLDFVSSWDTHLHLIEFVYNNSYQA--------------------------------------------------
Query: ---------------------------------------------TLDSSNVIDFKPLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEE
D ++V+DF+PL++ + L++EE+PV+I+ REVK LR+REI+ VKVLWRNH +EE
Subjt: ---------------------------------------------TLDSSNVIDFKPLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEE
Query: VTWEREEKMMSKYPELF
TW+REE M ++YPELF
Subjt: VTWEREEKMMSKYPELF
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| KAA0036958.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.7e-100 | 35.81 | Show/hide |
Query: ISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKVLTTLRTNKLFA
+ +KIDLRSGYHQLRI++SDI KT FR+RY HYEF VMSFGLTN FM LMN+V K+FLD+FVIVFIDDI +YS+T +HEEHL +VL TLR N+L+A
Subjt: ISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKVLTTLRTNKLFA
Query: KFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE-------------------------------------------------------
KFSK EF ++V FLGHVVS + V+PAKIEAV+NWPR +T++E
Subjt: KFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE-------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVV
NMK +VA+FVS+CLVCQQVK RQ+PA LLQ LSV KWE+++MDFI LP+T +GYTVIWVV
Subjt: ------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVV
Query: VDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM------------------------------------DVQTERLNQILEDMLRACMLDFVSSW
VDRLTKSAHF P KSTY+ +KW QLY+ E+ RLHGVP+ D QTERLNQILEDMLRAC+LDF SW
Subjt: VDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM------------------------------------DVQTERLNQILEDMLRACMLDFVSSW
Query: DTHLHLIEFVYNNSYQATL---------------------------------------------------------------------------------
D+HLHL+EF YN SYQAT+
Subjt: DTHLHLIEFVYNNSYQATL---------------------------------------------------------------------------------
Query: ------------------DSSNVIDFKPLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKMMSKYPEL
D ++V+DF+PL++ + L++EE+PV+I+ REVK L +REI+ VKVLWRNH +EEVTWEREE M ++YPEL
Subjt: ------------------DSSNVIDFKPLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKMMSKYPEL
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| KAA0051522.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.0e-105 | 34.61 | Show/hide |
Query: DMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKV
D+ D G + +KIDLRSGYHQLRIK D+ KT FR+RYGHYEF VMSFGLTN A FM LMN+V +EFLD FVIVFIDDIL+YSKT +HEEHLR V
Subjt: DMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKV
Query: LTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE--------------------------------------------
L TLR NKL+AKFSKCEFW +QV FLGHVVS+ + V+PAKIEAVT W R +T++E
Subjt: LTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE--------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAEL
NMK +VAEFVS+CLVCQQVK PRQKPA L
Subjt: -----------------------------------------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAEL
Query: LQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVVVDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM---------------------------
LQPLS+ EWKWEN++MDFI LPRT RG+TVIWVVV+RLTKSAHF P KSTY+ KWAQLY+ E+ RLHGVP+
Subjt: LQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVVVDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM---------------------------
Query: ---------DVQTERLNQILEDMLRACMLDFVSSWDTHLHLIEFVYNNSYQATL----------------------------------------------
D QTERLNQ+LEDMLRAC L+F SWD+HLHL+EF YNNSYQAT+
Subjt: ---------DVQTERLNQILEDMLRACMLDFVSSWDTHLHLIEFVYNNSYQATL----------------------------------------------
Query: ------------------------------------------------------------------------------------------DSSNVIDFKP
D S+V+D++P
Subjt: ------------------------------------------------------------------------------------------DSSNVIDFKP
Query: LRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKMMSKYPELF
L +D+ L++ E+PV ++ REVK LRNREI FVK+LWRNH++EE TWERE+ M S+YPELF
Subjt: LRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKMMSKYPELF
|
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| TYK01415.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.4e-102 | 34.03 | Show/hide |
Query: DMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKV
D+ D G + +KI LR GYHQLRIK+ D+ KT FR+RYGHYEF VMSFGLTN A FM LMN+V +EFLD FVIVFIDDIL+YSKT +HEEHLR V
Subjt: DMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKV
Query: LTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE--------------------------------------------
L TLR NKL+AKFSKCEFW + V FLGHVVS+ + V+P KIEAVT+W R +T++E
Subjt: LTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE--------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVVVDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLH
NMK +VAEFVSKCLVCQQVK PRQKPA LLQ LS+ EWKWEN++MDFI LPRT RG+TVIWVVVDRLTKSAHF P KSTY+ KWAQLY+ E+ RLH
Subjt: --NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVVVDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLH
Query: GVPM------------------------------------DVQTERLNQILEDMLRACMLDFVSSWDTHLHLIEFVYNNSYQATL---------------
GVP+ D QTERLNQ+LEDMLRAC L+F+ SWD+HLHL+EF YNNS+QAT+
Subjt: GVPM------------------------------------DVQTERLNQILEDMLRACMLDFVSSWDTHLHLIEFVYNNSYQATL---------------
Query: -------------------------------------------------------------------------------------------DSSNVIDFK
D S+V+D++
Subjt: -------------------------------------------------------------------------------------------DSSNVIDFK
Query: PLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKMMSKYPELF
PL +D+ L++ E+PV+++ REVK LRNREIA VKVLWRNH++EE TWE+E+ M S+YPELF
Subjt: PLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKMMSKYPELF
|
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| TYK21249.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.7e-100 | 35.81 | Show/hide |
Query: ISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKVLTTLRTNKLFA
+ +KIDLRSGYHQLRI++SDI KT FR+RY HYEF VMSFGLTN FM LMN+V K+FLD+FVIVFIDDI +YS+T +HEEHL +VL TLR N+L+A
Subjt: ISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKVLTTLRTNKLFA
Query: KFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE-------------------------------------------------------
KFSK EF ++V FLGHVVS + V+PAKIEAV+NWPR +T++E
Subjt: KFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE-------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVV
NMK +VA+FVS+CLVCQQVK RQ+PA LLQ LSV KWE+++MDFI LP+T +GYTVIWVV
Subjt: ------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVV
Query: VDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM------------------------------------DVQTERLNQILEDMLRACMLDFVSSW
VDRLTKSAHF P KSTY+ +KW QLY+ E+ RLHGVP+ D QTERLNQILEDMLRAC+LDF SW
Subjt: VDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM------------------------------------DVQTERLNQILEDMLRACMLDFVSSW
Query: DTHLHLIEFVYNNSYQATL---------------------------------------------------------------------------------
D+HLHL+EF YN SYQAT+
Subjt: DTHLHLIEFVYNNSYQATL---------------------------------------------------------------------------------
Query: ------------------DSSNVIDFKPLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKMMSKYPEL
D ++V+DF+PL++ + L++EE+PV+I+ REVK L +REI+ VKVLWRNH +EEVTWEREE M ++YPEL
Subjt: ------------------DSSNVIDFKPLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKMMSKYPEL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SUC9 Putative Gag-pol protein | 6.2e-104 | 35.15 | Show/hide |
Query: DMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKV
D+ D G I +KIDLRSGYHQLRI++S I KT FR+RY HYEF VMSFGLTN LA FM LMN+V K+FLD+FVIVFIDDIL+YSKT +HEEHL +V
Subjt: DMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKV
Query: LTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE--------------------------------------------
L TLR N+L+ KFSKCEFW ++V FLGHVVS + V+PAKIEA+TNWPR +T++E
Subjt: LTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE--------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQ
NMK +VA+FVS+CLVCQQVK RQ+PA LLQ
Subjt: ---------------------------------------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQ
Query: PLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVVVDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM-----------------------------
PLSV WKWE+++MDFI+ LPRT +GYTVIWVVVDRLTK AHF P KSTY+ KW QLY+ E+ +LHGVP+
Subjt: PLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVVVDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM-----------------------------
Query: -------DVQTERLNQILEDMLRACMLDFVSSWDTHLHLIEFVYNNSYQA--------------------------------------------------
D QTERLNQILEDMLRAC+L+F SWD+HLHL+EF YNNSY+
Subjt: -------DVQTERLNQILEDMLRACMLDFVSSWDTHLHLIEFVYNNSYQA--------------------------------------------------
Query: ---------------------------------------------TLDSSNVIDFKPLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEE
D ++V+DF+PL++ + L++EE+PV+I+ REVK LR+REI+ VKVLWRNH +EE
Subjt: ---------------------------------------------TLDSSNVIDFKPLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEE
Query: VTWEREEKMMSKYPELF
TW+REE M ++YPELF
Subjt: VTWEREEKMMSKYPELF
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| A0A5A7T2F0 Ty3-gypsy retrotransposon protein | 8.4e-101 | 35.81 | Show/hide |
Query: ISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKVLTTLRTNKLFA
+ +KIDLRSGYHQLRI++SDI KT FR+RY HYEF VMSFGLTN FM LMN+V K+FLD+FVIVFIDDI +YS+T +HEEHL +VL TLR N+L+A
Subjt: ISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKVLTTLRTNKLFA
Query: KFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE-------------------------------------------------------
KFSK EF ++V FLGHVVS + V+PAKIEAV+NWPR +T++E
Subjt: KFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE-------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVV
NMK +VA+FVS+CLVCQQVK RQ+PA LLQ LSV KWE+++MDFI LP+T +GYTVIWVV
Subjt: ------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVV
Query: VDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM------------------------------------DVQTERLNQILEDMLRACMLDFVSSW
VDRLTKSAHF P KSTY+ +KW QLY+ E+ RLHGVP+ D QTERLNQILEDMLRAC+LDF SW
Subjt: VDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM------------------------------------DVQTERLNQILEDMLRACMLDFVSSW
Query: DTHLHLIEFVYNNSYQATL---------------------------------------------------------------------------------
D+HLHL+EF YN SYQAT+
Subjt: DTHLHLIEFVYNNSYQATL---------------------------------------------------------------------------------
Query: ------------------DSSNVIDFKPLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKMMSKYPEL
D ++V+DF+PL++ + L++EE+PV+I+ REVK L +REI+ VKVLWRNH +EEVTWEREE M ++YPEL
Subjt: ------------------DSSNVIDFKPLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKMMSKYPEL
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| A0A5A7T690 Pol protein | 2.1e-99 | 33.12 | Show/hide |
Query: DMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKV
D+ D G + +KIDLRSGYHQLRI++SDI KT FR+RYGHYEF VMSFGLTN + FM LMNKV K+FLD+F+IVFIDDIL+YSKT +HEEHL +V
Subjt: DMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKV
Query: LTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE--------------------------------------------
L TLR N+L+AKFSKCEFW ++V FLGHVVS R+ V+PAKIEAVTNWPR +T++E
Subjt: LTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE--------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------------NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVVVDRLTKSAHFPPRKSTYSVDKWA
NMK +VA+FVS+CLVCQQVK PRQ+PAELLQP+SV WKWE+++MDFI LP+T +GYTVIWVVVDRLTKSAHF P KSTY+ KW
Subjt: -------------NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVVVDRLTKSAHFPPRKSTYSVDKWA
Query: QLYLKEVTRLHGVPM------------------------------------DVQTERLNQILEDMLRACMLDFVSSWDTHLHLIEFVYNNSYQATL----
QLY+ E+ RLH VP+ D QTERLNQ+LEDMLRACML+F SWD+HLHL+EF YNNSYQAT+
Subjt: QLYLKEVTRLHGVPM------------------------------------DVQTERLNQILEDMLRACMLDFVSSWDTHLHLIEFVYNNSYQATL----
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----DSSNVIDFKPLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKM
D ++V+DFKPL++ + L++EE+PV+I+ REVK LR+REI+ VKV+WRNH +EE TWEREE M
Subjt: -----DSSNVIDFKPLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKM
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| A0A5A7U6Z4 Ty3-gypsy retrotransposon protein | 1.5e-105 | 34.61 | Show/hide |
Query: DMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKV
D+ D G + +KIDLRSGYHQLRIK D+ KT FR+RYGHYEF VMSFGLTN A FM LMN+V +EFLD FVIVFIDDIL+YSKT +HEEHLR V
Subjt: DMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKV
Query: LTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE--------------------------------------------
L TLR NKL+AKFSKCEFW +QV FLGHVVS+ + V+PAKIEAVT W R +T++E
Subjt: LTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE--------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAEL
NMK +VAEFVS+CLVCQQVK PRQKPA L
Subjt: -----------------------------------------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAEL
Query: LQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVVVDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM---------------------------
LQPLS+ EWKWEN++MDFI LPRT RG+TVIWVVV+RLTKSAHF P KSTY+ KWAQLY+ E+ RLHGVP+
Subjt: LQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVVVDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM---------------------------
Query: ---------DVQTERLNQILEDMLRACMLDFVSSWDTHLHLIEFVYNNSYQATL----------------------------------------------
D QTERLNQ+LEDMLRAC L+F SWD+HLHL+EF YNNSYQAT+
Subjt: ---------DVQTERLNQILEDMLRACMLDFVSSWDTHLHLIEFVYNNSYQATL----------------------------------------------
Query: ------------------------------------------------------------------------------------------DSSNVIDFKP
D S+V+D++P
Subjt: ------------------------------------------------------------------------------------------DSSNVIDFKP
Query: LRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKMMSKYPELF
L +D+ L++ E+PV ++ REVK LRNREI FVK+LWRNH++EE TWERE+ M S+YPELF
Subjt: LRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKMMSKYPELF
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| A0A5D3DDB2 Ty3-gypsy retrotransposon protein | 8.4e-101 | 35.81 | Show/hide |
Query: ISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKVLTTLRTNKLFA
+ +KIDLRSGYHQLRI++SDI KT FR+RY HYEF VMSFGLTN FM LMN+V K+FLD+FVIVFIDDI +YS+T +HEEHL +VL TLR N+L+A
Subjt: ISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKVLTTLRTNKLFA
Query: KFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE-------------------------------------------------------
KFSK EF ++V FLGHVVS + V+PAKIEAV+NWPR +T++E
Subjt: KFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE-------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVV
NMK +VA+FVS+CLVCQQVK RQ+PA LLQ LSV KWE+++MDFI LP+T +GYTVIWVV
Subjt: ------------------------------------NMKCDVAEFVSKCLVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVV
Query: VDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM------------------------------------DVQTERLNQILEDMLRACMLDFVSSW
VDRLTKSAHF P KSTY+ +KW QLY+ E+ RLHGVP+ D QTERLNQILEDMLRAC+LDF SW
Subjt: VDRLTKSAHFPPRKSTYSVDKWAQLYLKEVTRLHGVPM------------------------------------DVQTERLNQILEDMLRACMLDFVSSW
Query: DTHLHLIEFVYNNSYQATL---------------------------------------------------------------------------------
D+HLHL+EF YN SYQAT+
Subjt: DTHLHLIEFVYNNSYQATL---------------------------------------------------------------------------------
Query: ------------------DSSNVIDFKPLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKMMSKYPEL
D ++V+DF+PL++ + L++EE+PV+I+ REVK L +REI+ VKVLWRNH +EEVTWEREE M ++YPEL
Subjt: ------------------DSSNVIDFKPLRLDKGLNHEEEPVQIVDREVKTLRNREIAFVKVLWRNHQLEEVTWEREEKMMSKYPEL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.5e-22 | 39.01 | Show/hide |
Query: IDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKVLTTLRTNKLFAKFSK
IDL G+HQ+ + +SKT F T++GHYE+ M FGL N A F MN +L+ L+ +V++DDI+V+S + ++H + L V L L + K
Subjt: IDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKVLTTLRTNKLFAKFSK
Query: CEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE
CEF ++ FLGHV++ I P KIEA+ +P T E
Subjt: CEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 4.0e-23 | 30.96 | Show/hide |
Query: KCSCLEIFDQQESLKLDMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDIL
K + + I D+ +D I G + IDL G+HQ+ + E ISKT F T+ GHYE+ M FGL N A F MN +L+ L+ +V++DDI+
Subjt: KCSCLEIFDQQESLKLDMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDIL
Query: VYSKTREQHEEHLRKVLTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTENMK---------------CDVAEFVSKC
++S + +H ++ V T L L + KCEF ++ FLGH+V+ I P K++A+ ++P T E D+A+ ++ C
Subjt: VYSKTREQHEEHLRKVLTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTENMK---------------CDVAEFVSKC
Query: LVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLP
L ++ K+ QK L+ + E I D I++LP
Subjt: LVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLP
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| P31843 RNA-directed DNA polymerase homolog | 1.2e-19 | 57.3 | Show/hide |
Query: KIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILV---YSKTREQHEEHLRKV
K+DLRSGY Q+RI + D KT TRYG +EFRVM FGLTN LA F LMN VL E+LD+FV+V++DD++V YS + +H +HLR V
Subjt: KIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILV---YSKTREQHEEHLRKV
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 4.4e-22 | 39.72 | Show/hide |
Query: IDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKVLTTLRTNKLFAKFSK
+DL SG+HQ+ +KESDI KT F T G YEF + FGL N A F +++ +L+E + V+IDDI+V+S+ + H ++LR VL +L L K
Subjt: IDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLRKVLTTLRTNKLFAKFSK
Query: CEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE
F QV FLG++V+ I +P K+ A++ P T++ E
Subjt: CEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.6e-19 | 34.81 | Show/hide |
Query: KLDMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLR
++D + G +I +DL SGYHQ+ ++ D KT F T G YE+ VM FGL N + F M ++ FV V++DDIL++S++ E+H +HL
Subjt: KLDMIDLASGVIRISNKIDLRSGYHQLRIKESDISKTVFRTRYGHYEFRVMSFGLTNDLAAFMGLMNKVLKEFLDNFVIVFIDDILVYSKTREQHEEHLR
Query: KVLTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE
VL L+ L K KC+F +E+ FLG+ + +I K A+ ++P T+ +
Subjt: KVLTTLRTNKLFAKFSKCEFWAEQVGFLGHVVSRMRIIVEPAKIEAVTNWPRQTTMTE
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 3.4e-14 | 31.54 | Show/hide |
Query: IIVEPAKIEAVTNWPRQTTMTENMKCDVAEFVSKCLVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVVVDRLTKSAHFPPRK
+ V AKI + WP+ ++ + +++ C+ CQ +K R + LLQPL + E +W +I+MDF+ LP T +I VVVDR +K AHF +
Subjt: IIVEPAKIEAVTNWPRQTTMTENMKCDVAEFVSKCLVCQQVKVPRQKPAELLQPLSVLEWKWENIAMDFIVRLPRTPRGYTVIWVVVDRLTKSAHFPPRK
Query: STYSVDKWAQLYLKEVTRLHGVPMDVQTER
T + L + + HG P + ++R
Subjt: STYSVDKWAQLYLKEVTRLHGVPMDVQTER
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