; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G020590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G020590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description40S ribosomal protein S4
Genome locationCmo_Chr04:11587372..11589553
RNA-Seq ExpressionCmoCh04G020590
SyntenyCmoCh04G020590
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000876 - Ribosomal protein S4e
IPR002942 - RNA-binding S4 domain
IPR005824 - KOW
IPR013843 - Ribosomal protein S4e, N-terminal
IPR013845 - Ribosomal protein S4e, central region
IPR014722 - Ribosomal protein L2, domain 2
IPR018199 - Ribosomal protein S4e, N-terminal, conserved site
IPR032277 - 40S ribosomal protein S4, C-terminal domain
IPR036986 - RNA-binding S4 domain superfamily
IPR038237 - Ribosomal protein S4e, central domain superfamily
IPR041982 - Ribosomal protein S4, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132117.1 40S ribosomal protein S4-3 [Momordica charantia]2.0e-14698.86Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAK+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT
        HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLA+QAAVT
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT

XP_022930037.1 40S ribosomal protein S4-3-like [Cucurbita moschata]3.6e-148100Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
        HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV

XP_022994321.1 40S ribosomal protein S4-3 [Cucurbita maxima]4.7e-14899.62Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKFKLCK+RSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
        HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV

XP_023546337.1 40S ribosomal protein S4-3 [Cucurbita pepo subsp. pepo]7.5e-14697.34Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LILRNRLKYALTYREVISILMQRH+LVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVVMVTGGRNRGRVGV+KNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT
        HKGSFET+HIQDATGHEFATRLGNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLA+QAAVT
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT

XP_038899765.1 40S ribosomal protein S4-3-like [Benincasa hispida]5.7e-14698.48Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAK+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT
        HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLA+QAAVT
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT

TrEMBL top hitse value%identityAlignment
A0A6J1BSY6 40S ribosomal protein S49.5e-14798.86Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAK+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT
        HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLA+QAAVT
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT

A0A6J1D0L7 40S ribosomal protein S46.2e-14698.1Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHVLVD KVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAK+KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT
        HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKG+KLSIIEEARKRLA+QAAVT
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT

A0A6J1EP89 40S ribosomal protein S41.7e-148100Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
        HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV

A0A6J1H190 40S ribosomal protein S44.7e-14696.96Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LILRNRLKYALTYREVISILMQRH+LVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVVMVTGGRNRGRVG++KNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT
        HKGSFET+HIQDATGHEFATRLGNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLA+QAAVT
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVT

A0A6J1JYT2 40S ribosomal protein S42.3e-14899.62Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHSVRDEEAKFKLCK+RSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
        HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV

SwissProt top hitse value%identityAlignment
P46299 40S ribosomal protein S42.9e-14093.1Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI+ILMQRHV+VDGKVRTDKTYPAGFMDVVSIPKTNE+FR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRF LH++  +E KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        HKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPK KGIKLSIIEEARKRLA Q A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

P46300 40S ribosomal protein S48.0e-14393.49Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYREVISILMQR V+VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS+RDEE+KFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        HKGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPWVSLPKGKGIKL+IIE+ARKRLA Q+A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

P49204 40S ribosomal protein S4-22.8e-14393.49Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        HKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLA+Q A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

Q8VYK6 40S ribosomal protein S4-32.1e-14393.49Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        HKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLA+Q A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

Q93VH9 40S ribosomal protein S4-11.4e-14293.1Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        HKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRL+ Q A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

Arabidopsis top hitse value%identityAlignment
AT2G17360.1 Ribosomal protein S4 (RPS4A) family protein9.7e-14493.1Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        HKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRL+ Q A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

AT2G17360.2 Ribosomal protein S4 (RPS4A) family protein1.4e-9792.27Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
        LLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVG  V
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV

AT5G07090.1 Ribosomal protein S4 (RPS4A) family protein2.0e-14493.49Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        HKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLA+Q A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

AT5G07090.2 Ribosomal protein S4 (RPS4A) family protein7.7e-13393Show/hide
Query:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF
        AKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEF
Subjt:  AKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEF

Query:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        ATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLA+Q A
Subjt:  ATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA

AT5G58420.1 Ribosomal protein S4 (RPS4A) family protein1.5e-14493.49Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVISILMQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK
        LLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREK

Query:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA
        HKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLA+Q A
Subjt:  HKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGAGGATTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTCGACAAACTCGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCTCACAA
ATCAAGGGAATGTCTCCCACTGATTTTGATATTGCGTAACAGATTGAAATATGCTCTCACATACCGTGAGGTAATTTCAATTTTGATGCAACGACATGTTTTAGTTGATG
GGAAGGTGAGGACAGACAAGACGTACCCTGCTGGGTTCATGGATGTTGTGTCGATTCCCAAAACAAATGAGAATTTCCGGCTTCTCTACGACACAAAAGGCCGATTCCGT
CTTCACTCAGTCAGGGATGAAGAGGCTAAGTTTAAGCTGTGCAAAGTTCGGTCAGTGCAGTTTGGGCAGAAGGGAATTCCTTATCTGAACACTTACGATGGACGAACAAT
CCGATATCCCGACCCCCTGATCAAGGCAAACGACACCATCAAGCTAGACCTCGACTCGAACAAGATTGCTGATTTCATCAAGTTTGATGTGGGAAACGTTGTGATGGTGA
CTGGTGGAAGAAATAGAGGACGAGTTGGAGTAATTAAAAACAGGGAGAAGCACAAGGGAAGCTTTGAGACAATTCACATTCAGGATGCTACCGGGCATGAATTTGCAACT
CGGCTGGGCAATGTGTTTACGATTGGGAAGGGGACAAAGCCATGGGTGTCCCTTCCCAAGGGCAAGGGTATAAAACTATCCATCATTGAAGAAGCCAGGAAGAGGCTTGC
CAACCAAGCAGCCGTTACGGTTTAA
mRNA sequenceShow/hide mRNA sequence
TATTCTCCTACTCAGGCTTTCATATAACGTATTACCGCCATTTGAACAATCTCTTGTTCGCCTCTGCAGACGCTCTAGCTCTTTCCAACTTCGTTTTGAGGATATGGCAA
GAGGATTGAAGAAGCATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTCGACAAACTCGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCTCACAAATCAAGG
GAATGTCTCCCACTGATTTTGATATTGCGTAACAGATTGAAATATGCTCTCACATACCGTGAGGTAATTTCAATTTTGATGCAACGACATGTTTTAGTTGATGGGAAGGT
GAGGACAGACAAGACGTACCCTGCTGGGTTCATGGATGTTGTGTCGATTCCCAAAACAAATGAGAATTTCCGGCTTCTCTACGACACAAAAGGCCGATTCCGTCTTCACT
CAGTCAGGGATGAAGAGGCTAAGTTTAAGCTGTGCAAAGTTCGGTCAGTGCAGTTTGGGCAGAAGGGAATTCCTTATCTGAACACTTACGATGGACGAACAATCCGATAT
CCCGACCCCCTGATCAAGGCAAACGACACCATCAAGCTAGACCTCGACTCGAACAAGATTGCTGATTTCATCAAGTTTGATGTGGGAAACGTTGTGATGGTGACTGGTGG
AAGAAATAGAGGACGAGTTGGAGTAATTAAAAACAGGGAGAAGCACAAGGGAAGCTTTGAGACAATTCACATTCAGGATGCTACCGGGCATGAATTTGCAACTCGGCTGG
GCAATGTGTTTACGATTGGGAAGGGGACAAAGCCATGGGTGTCCCTTCCCAAGGGCAAGGGTATAAAACTATCCATCATTGAAGAAGCCAGGAAGAGGCTTGCCAACCAA
GCAGCCGTTACGGTTTAAGAGTTGAGTGTTGTAGTCATGATTCTAAGACTATTTTTGTTTAATATTTGGTGTTCTAATATGATTATAAATTAGATGTTGAGACTATTTCT
G
Protein sequenceShow/hide protein sequence
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFR
LHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFAT
RLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLANQAAVTV