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CmoCh04G020840 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G020840
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionaspartic proteinase CDR1-like
Genome locationCmo_Chr04:12539028..12539655
RNA-Seq ExpressionCmoCh04G020840
SyntenyCmoCh04G020840
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022975011.1 aspartic proteinase CDR1-like [Cucurbita maxima]6.6e-4288Show/hide
Query:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV
        GPPAKGN VLD GTPPT LPKELYGRLAA+VR+HIPSKPI DDTLCYK NLGDLVMTLHFD GVDLRLSTVQTFNKMPDGSF FTAMGVD KDALI NS+
Subjt:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV

XP_022976385.1 aspartic proteinase CDR1-like [Cucurbita maxima]1.1e-4187Show/hide
Query:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV
        GPP KGN VLD GTPPT LPKELYGRLAA+VR+HIPSKPI DDTLCYK NLGDLVMTLHFD GVDLRLSTVQTFNKMPDGSF FTAMGVD+KDALI NS+
Subjt:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV

XP_022984181.1 aspartic proteinase CDR1-like [Cucurbita maxima]1.9e-4187.88Show/hide
Query:  PPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV
        PPAKGN VLD GTPPT LPKELYGRLAA+VR+HIPSKPI DDTLCYK NLGDLVMTLHFD GVDLRLSTVQTFNKMPDGSF FTAMGVD+KDALI NS+
Subjt:  PPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV

XP_022987324.1 aspartic proteinase CDR1-like [Cucurbita maxima]3.9e-4288Show/hide
Query:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV
        GPPAKGN VLD GTPPT LPKELYGRLAA+VR+HIPSKPI DDTLCYK NLGDLVMTLHFD GVDLRLSTVQTFNKMPDGSF FTAMGVD+KDALI NS+
Subjt:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV

XP_023525703.1 aspartic proteinase CDR1-like [Cucurbita pepo subsp. pepo]8.6e-4287Show/hide
Query:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV
        GPPAKGN VLD GTPPT LPKELYGRLAA+VR+HIPSKPI DDTLCYK NLGDLVMTLHFD GVDLRLSTVQTFNKMPDGSF FTAMGVD+KDA+I NS+
Subjt:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV

TrEMBL top hitse value%identityAlignment
A0A6J1ID07 aspartic proteinase CDR1-like3.2e-4288Show/hide
Query:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV
        GPPAKGN VLD GTPPT LPKELYGRLAA+VR+HIPSKPI DDTLCYK NLGDLVMTLHFD GVDLRLSTVQTFNKMPDGSF FTAMGVD KDALI NS+
Subjt:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV

A0A6J1IJB2 aspartic proteinase CDR1-like5.5e-4287Show/hide
Query:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV
        GPP KGN VLD GTPPT LPKELYGRLAA+VR+HIPSKPI DDTLCYK NLGDLVMTLHFD GVDLRLSTVQTFNKMPDGSF FTAMGVD+KDALI NS+
Subjt:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV

A0A6J1IJC2 aspartic proteinase CDR1-like9.3e-4285Show/hide
Query:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV
        GPPAKGN +LD GTPPT LPKELYGRLA +VR+HIPSKPI DDTLCYK NLGDLVMTLHFD GVDLRLSTVQTFNKMPDGSF FTAMG+D+KDALI NS+
Subjt:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV

A0A6J1J4I9 aspartic proteinase CDR1-like9.3e-4287.88Show/hide
Query:  PPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV
        PPAKGN VLD GTPPT LPKELYGRLAA+VR+HIPSKPI DDTLCYK NLGDLVMTLHFD GVDLRLSTVQTFNKMPDGSF FTAMGVD+KDALI NS+
Subjt:  PPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV

A0A6J1JIJ5 aspartic proteinase CDR1-like1.9e-4288Show/hide
Query:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV
        GPPAKGN VLD GTPPT LPKELYGRLAA+VR+HIPSKPI DDTLCYK NLGDLVMTLHFD GVDLRLSTVQTFNKMPDGSF FTAMGVD+KDALI NS+
Subjt:  GPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPI-DDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSV

SwissProt top hitse value%identityAlignment
Q6XBF8 Aspartic proteinase CDR17.9e-0633.7Show/hide
Query:  AKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPIDD-----TLCYKYNLGDL---VMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMG
        ++GN+++D GT  T LP E Y  L   V   I ++   D     +LCY    GDL   V+T+HFD G D++L +   F ++ +    F   G
Subjt:  AKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPIDD-----TLCYKYNLGDL---VMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMG

Arabidopsis top hitse value%identityAlignment
AT1G64830.1 Eukaryotic aspartyl protease family protein9.0e-0534.21Show/hide
Query:  KGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPIDD-----TLCYKYNLGDLV--MTLHFDCGVDLRLSTVQTF
        +GN+V+D GT  T LP   Y  L + V   I ++ + D     +LCY+ +    V  +T+HF  G D++L  + TF
Subjt:  KGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPIDD-----TLCYKYNLGDLV--MTLHFDCGVDLRLSTVQTF

AT2G28010.1 Eukaryotic aspartyl protease family protein3.1e-0531.11Show/hide
Query:  KGNVVLDIGTPPTFLPKELYGRLAAKVRQHI-----PSKPI-DDTLCYKYNLGDL--VMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAM
        +GN+V+D GT  T+ P   Y  L  +  +H+      + P  +D LCY  +  D+  V+T+HF  GVDL L     + +  +G  +  A+
Subjt:  KGNVVLDIGTPPTFLPKELYGRLAAKVRQHI-----PSKPI-DDTLCYKYNLGDL--VMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAM

AT2G28040.1 Eukaryotic aspartyl protease family protein4.0e-0532.18Show/hide
Query:  KGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSK---PIDDTLCYKYNLGDL--VMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAM
        KGN+V+D G+  T+ P E Y  L  K  + + +    P  D LCY     D+  V+T+HF  G DL L     +     G  +  A+
Subjt:  KGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSK---PIDDTLCYKYNLGDL--VMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAM

AT5G33340.1 Eukaryotic aspartyl protease family protein5.6e-0733.7Show/hide
Query:  AKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPIDD-----TLCYKYNLGDL---VMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMG
        ++GN+++D GT  T LP E Y  L   V   I ++   D     +LCY    GDL   V+T+HFD G D++L +   F ++ +    F   G
Subjt:  AKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPIDD-----TLCYKYNLGDL---VMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGACCTCCGGCCAAGGGGAACGTGGTTCTCGATATCGGCACGCCGCCGACTTTCCTCCCCAAAGAATTGTACGGACGATTGGCTGCCAAAGTTCGGCAGCATAT
CCCGTCGAAGCCCATTGATGATACTCTTTGCTACAAATATAATTTGGGGGATTTGGTGATGACTCTACACTTCGACTGCGGTGTGGATTTGCGATTGAGTACGGTTCAGA
CTTTCAATAAGATGCCGGATGGGTCCTTTTACTTCACCGCGATGGGCGTTGACGAGAAGGACGCACTCATTGAAAATAGTGTGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGACCTCCGGCCAAGGGGAACGTGGTTCTCGATATCGGCACGCCGCCGACTTTCCTCCCCAAAGAATTGTACGGACGATTGGCTGCCAAAGTTCGGCAGCATAT
CCCGTCGAAGCCCATTGATGATACTCTTTGCTACAAATATAATTTGGGGGATTTGGTGATGACTCTACACTTCGACTGCGGTGTGGATTTGCGATTGAGTACGGTTCAGA
CTTTCAATAAGATGCCGGATGGGTCCTTTTACTTCACCGCGATGGGCGTTGACGAGAAGGACGCACTCATTGAAAATAGTGTGAAATAA
Protein sequenceShow/hide protein sequence
MLGPPAKGNVVLDIGTPPTFLPKELYGRLAAKVRQHIPSKPIDDTLCYKYNLGDLVMTLHFDCGVDLRLSTVQTFNKMPDGSFYFTAMGVDEKDALIENSVK