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CmoCh04G020850 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G020850
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionATP synthase subunit a
Genome locationCmo_Chr04:12542198..12559971
RNA-Seq ExpressionCmoCh04G020850
SyntenyCmoCh04G020850
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component)
GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domainsIPR000568 - ATP synthase, F0 complex, subunit A
IPR035908 - ATP synthase, F0 complex, subunit A superfamily
IPR045083 - ATP synthase, F0 complex, subunit A, bacterial/mitochondria


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EPS74731.1 hypothetical protein M569_00006, partial [Genlisea aurea]8.3e-2869.81Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSL---------SLASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP
        A + +VELIYDFV NLVNEQIGGLS+NV +            L  R+L+  GMIPY+FTVTSHF+ITLGLS SL IGITIVGFQ+NG HFLSFSLPAGVP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSL---------SLASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP

Query:  LPLAPF
        LPLAPF
Subjt:  LPLAPF

QJS52186.1 ATP synthase subunit 6, partial [Fagopyrum esculentum]1.1e-2771.7Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSLS---------LASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP
        A +  VELIYDFV N VNEQIGGLS NV +  S         L  R+L+  GMIPY+FTVTSHFLITLGLS S+ IGITIVGFQRNGLHFLSFSLPAGVP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSLS---------LASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP

Query:  LPLAPF
        LPLAPF
Subjt:  LPLAPF

QUO98204.1 ATPase subunit 6 [Dalbergia odorifera]1.1e-2772.12Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKS----LSLASRSLKYF---GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP
        A +  VELIYDFV NLVNEQIGGLS NV +     +S+    L +    GMIPY+FTVTSHFLITLGLS S+ IGITIVGFQRNGLHFLSFSLPAGVPLP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKS----LSLASRSLKYF---GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP

Query:  LAPF
        LAPF
Subjt:  LAPF

QWX88150.1 ATPase subunit 6 [Indigofera tinctoria]1.1e-2772.12Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNV-NKSLSLASRSLKYF------GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP
        A +  VELIYDFV NLVNEQIGGLS+NV +K     S +  +       GMIPY+FTVTSHFLITLGLS S+ IGITIVGFQRNGLHFLSFSLPAGVPLP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNV-NKSLSLASRSLKYF------GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP

Query:  LAPF
        LAPF
Subjt:  LAPF

QXP99897.1 ATP synthase F0 subunit 6 [Fallopia aubertii]1.1e-2771.7Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSLS---------LASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP
        A +  VELIYDFV N VNEQIGGLS NV +  S         L  R+L+  GMIPY+FTVTSHFLITLGLS S+ IGITIVGFQRNGLHFLSFSLPAGVP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSLS---------LASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP

Query:  LPLAPF
        LPLAPF
Subjt:  LPLAPF

TrEMBL top hitse value%identityAlignment
A0A1L6K301 ATP synthase subunit a (Fragment)6.9e-2872.12Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNK------SLSLASRSLKYF-GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP
        A +  VELIYDFV NLVNEQIGGLS NV +      S++L     +   GMIPY+FTVTSHFLITLGLS SL IGITIVGFQ+NGLHFLSFSLPAGVPLP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNK------SLSLASRSLKYF-GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP

Query:  LAPF
        LAPF
Subjt:  LAPF

A0A3G1STK1 ATP synthase subunit a5.3e-2871.7Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSLS---------LASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP
        A +  VELIYDFV N VNEQIGGLS NV +  S         L  R+L+  GMIPY+FTVTSHFLITLGLS S+ IGITIVGFQRNGLHFLSFSLPAGVP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSLS---------LASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP

Query:  LPLAPF
        LPLAPF
Subjt:  LPLAPF

A0A5Q3A9A8 ATP synthase subunit a5.3e-2872.12Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKS----LSLASRSLKY---FGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP
        A + +VELIYDFV NLVNEQIGGLS NV +     +S+    L +    GMIPY+FTVTSHFLITLGLS S+ IGITIVGFQRNGLHFLSFSLPAGVPLP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKS----LSLASRSLKY---FGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP

Query:  LAPF
        LAPF
Subjt:  LAPF

A0A7N0UN17 Uncharacterized protein6.9e-2872.12Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKS----LSLASRSLKY---FGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP
        A +  VELIYDFV NLVNEQIGGLS NV +     +S+    L +    GMIPY+FTVTSHFLITLGLS S+ IGITIVGFQRNGLHFLSFSLPAGVPLP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKS----LSLASRSLKY---FGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP

Query:  LAPF
        LAPF
Subjt:  LAPF

S8DB49 Uncharacterized protein (Fragment)4.0e-2869.81Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSL---------SLASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP
        A + +VELIYDFV NLVNEQIGGLS+NV +            L  R+L+  GMIPY+FTVTSHF+ITLGLS SL IGITIVGFQ+NG HFLSFSLPAGVP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSL---------SLASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP

Query:  LPLAPF
        LPLAPF
Subjt:  LPLAPF

SwissProt top hitse value%identityAlignment
P05499 ATP synthase subunit a1.0e-2869.23Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSLS---LASRSLKYF----GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP
        A +  VELIYDFV N VNEQIGGLS NV +  S     + +   F    GMIPY+FTVTSHFLITLGLS S+ IGITIVGFQ+NGLHFLSF LPAGVPLP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSLS---LASRSLKYF----GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP

Query:  LAPF
        LAPF
Subjt:  LAPF

P05500 ATP synthase subunit a1.2e-2971.15Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSL---SLASRSLKYF----GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP
        A +  VELIYDFV NLVNEQIGGLS NV +      L + +   F    GMIPY+FTVTSHFLITLGLS S+ IGITIVGFQRNGLHFLSF LPAGVPLP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSL---SLASRSLKYF----GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP

Query:  LAPF
        LAPF
Subjt:  LAPF

P07925 ATP synthase subunit a3.3e-2767.31Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNV-NKSLSLASRSLKYF------GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP
        A +  VELIYDFV NLVNEQIGGLS NV +K     S +  +       GMIP++FTVTSHFLITL LS S+ IGITIVGFQR+GLHF SF LPAGVPLP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNV-NKSLSLASRSLKYF------GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP

Query:  LAPF
        LAPF
Subjt:  LAPF

P68526 ATP synthase subunit a5.6e-2766.35Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSL---SLASRSLKYF----GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP
        A +  VELIYDFV NLVNEQIGGLS NV +        + +   F    GMIP++FTVTSHFLITL LS S+ IGITIVGFQR+GLHF SF LPAGVPLP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSL---SLASRSLKYF----GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP

Query:  LAPF
        LAPF
Subjt:  LAPF

Q04654 ATP synthase subunit a2.7e-2970.19Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSL---SLASRSLKYF----GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP
        A +  VELIYDFV NLVNEQIGGLS NV +        + +   F    GMIPY+FTVTSHFLITLGLS S+ IGITIVGFQRNGLHFLSF LPAGVPLP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKSL---SLASRSLKYF----GMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLP

Query:  LAPF
        LAPF
Subjt:  LAPF

Arabidopsis top hitse value%identityAlignment
AT2G07741.1 ATPase, F0 complex, subunit A protein6.8e-2866.04Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKS---------LSLASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP
        A +  VEL+YDFV NLV EQIGGLS NV +          L L   +L+  GMIPY+FTVTSHFLITL LS S+ IGITIVGFQR+GLHF SF LPAGVP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKS---------LSLASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP

Query:  LPLAPF
        LPLAPF
Subjt:  LPLAPF

ATMG00410.1 ATPase subunit 6-16.8e-2866.04Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKS---------LSLASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP
        A +  VEL+YDFV NLV EQIGGLS NV +          L L   +L+  GMIPY+FTVTSHFLITL LS S+ IGITIVGFQR+GLHF SF LPAGVP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKS---------LSLASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP

Query:  LPLAPF
        LPLAPF
Subjt:  LPLAPF

ATMG01170.1 ATPase, F0 complex, subunit A protein6.8e-2866.04Show/hide
Query:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKS---------LSLASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP
        A +  VEL+YDFV NLV EQIGGLS NV +          L L   +L+  GMIPY+FTVTSHFLITL LS S+ IGITIVGFQR+GLHF SF LPAGVP
Subjt:  AQKEAVELIYDFVSNLVNEQIGGLSKNVNKS---------LSLASRSLKYFGMIPYNFTVTSHFLITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVP

Query:  LPLAPF
        LPLAPF
Subjt:  LPLAPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACGACATGCTTTCTGTACTGCATAGTGATGCGATCTATTCTCTTGCCAAAAGCCCTCATTGTATCCTCCAATGGTGGAGTATTTTCTGGCATTTTGTTGCGTCCAA
GTTCTACTACATGATATGGAAGATACAAAATATTGATGCTGCAATGTCTCTTCTTGCTCAGAAGGAGGCTGTAGAGCTTATTTATGATTTCGTATCGAACCTGGTAAACG
AACAAATAGGTGGTCTTTCCAAAAATGTTAACAAAAGTTTATCCCTCGCATCTCGGTCACTAAAGTATTTCGGTATGATACCTTATAACTTCACAGTTACAAGTCATTTT
CTCATTACTTTGGGTCTCTCACTTTCTCTTTCTATTGGTATTACTATAGTGGGATTTCAAAGAAATGGGCTTCATTTTTTAAGTTTCTCATTACCCGCTGGAGTCCCACT
GCCATTAGCACCTTTTTTTAGTACTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACGACATGCTTTCTGTACTGCATAGTGATGCGATCTATTCTCTTGCCAAAAGCCCTCATTGTATCCTCCAATGGTGGAGTATTTTCTGGCATTTTGTTGCGTCCAA
GTTCTACTACATGATATGGAAGATACAAAATATTGATGCTGCAATGTCTCTTCTTGCTCAGAAGGAGGCTGTAGAGCTTATTTATGATTTCGTATCGAACCTGGTAAACG
AACAAATAGGTGGTCTTTCCAAAAATGTTAACAAAAGTTTATCCCTCGCATCTCGGTCACTAAAGTATTTCGGTATGATACCTTATAACTTCACAGTTACAAGTCATTTT
CTCATTACTTTGGGTCTCTCACTTTCTCTTTCTATTGGTATTACTATAGTGGGATTTCAAAGAAATGGGCTTCATTTTTTAAGTTTCTCATTACCCGCTGGAGTCCCACT
GCCATTAGCACCTTTTTTTAGTACTCCTTGA
Protein sequenceShow/hide protein sequence
MHDMLSVLHSDAIYSLAKSPHCILQWWSIFWHFVASKFYYMIWKIQNIDAAMSLLAQKEAVELIYDFVSNLVNEQIGGLSKNVNKSLSLASRSLKYFGMIPYNFTVTSHF
LITLGLSLSLSIGITIVGFQRNGLHFLSFSLPAGVPLPLAPFFSTP