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CmoCh04G020950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G020950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionbasic form of pathogenesis-related protein 1-like
Genome locationCmo_Chr04:12954636..12954845
RNA-Seq ExpressionCmoCh04G020950
SyntenyCmoCh04G020950
Gene Ontology termsGO:0009607 - response to biotic stimulus (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001283 - Cysteine-rich secretory protein-related
IPR014044 - CAP domain
IPR035940 - CAP superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022958894.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata]2.1e-3195.65Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        MQWSNTVAAYAQAYAEKRKGDCAMIHSTG YGENIAAGYY EFTGADAVKLWVNEKPLYDH SNKCVGG
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

XP_022958973.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata]1.6e-3195.65Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        MQWSNTVAAYAQAYAEKRKGDCAMIHSTG YGENIAAGYY EFTGADAVKLWVNEKPLYDH SNKCVGG
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

XP_022974682.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima]4.6e-3194.2Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        MQWSNTVAAYAQAYAEKRKGDCAMIHSTG YGENIAAGYY EFTGADAVKLW NEKPLYDH SNKCVGG
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

XP_022975327.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima]6.1e-3194.2Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        MQWSNTVAAYAQAYAEKRKGDCAMIHSTG YGENIAAGYY EFTGADAVKLW NEKPLYDH SNKCVGG
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

XP_023538339.1 basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]2.1e-3194.2Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        MQW+NTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYY EFTGADAVKLW NEKPLYDH SNKCVGG
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

TrEMBL top hitse value%identityAlignment
A0A6J1H4L4 basic form of pathogenesis-related protein 1-like7.7e-3295.65Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        MQWSNTVAAYAQAYAEKRKGDCAMIHSTG YGENIAAGYY EFTGADAVKLWVNEKPLYDH SNKCVGG
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

A0A6J1H6F3 basic form of pathogenesis-related protein 1-like1.0e-3195.65Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        MQWSNTVAAYAQAYAEKRKGDCAMIHSTG YGENIAAGYY EFTGADAVKLWVNEKPLYDH SNKCVGG
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

A0A6J1I475 basic form of pathogenesis-related protein 1-like2.9e-3194.2Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        MQWSNTVAAYAQAYAEKRKGDCAMIHSTG YGENIAAGYY EFTGADAVKLW NEKPLYDH SNKCVGG
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

A0A6J1IAX2 basic form of pathogenesis-related protein 1-like2.2e-3194.2Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        MQWSNTVAAYAQAYAEKRKGDCAMIHSTG YGENIAAGYY EFTGADAVKLW NEKPLYDH SNKCVGG
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

A0A6J1ICC8 basic form of pathogenesis-related protein 1-like2.9e-3194.2Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        MQWSNTVAAYAQAYAEKRKGDCAMIHSTG YGENIAAGYY EFTGADAVKLW NEKPLYDH SNKCVGG
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

SwissProt top hitse value%identityAlignment
P07053 Pathogenesis-related protein 1B1.1e-1450.72Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        + W N VAAYAQ Y  +   DC ++HS G YGEN+A G     T A AV++WV+EK  YDH SN C  G
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

P08299 Pathogenesis-related protein 1A1.1e-1450.72Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        + W + VAAYAQ YA +   DC ++HS G YGEN+A G     T A AV++WV+EK  YDH SN C  G
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

P09042 Pathogenesis-related protein 1C4.1e-1450.72Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        + W + VAAYAQ YA +   DC ++HS G YGEN+A G     T A AV++WVNEK  Y H SN C  G
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

P11670 Basic form of pathogenesis-related protein 18.0e-1859.42Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        M W N +AAYAQ YA +R GDC MIHS G YGEN+AA  + +   A AVK+WV+EK  YD+ SN CVGG
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

Q08697 Pathogenesis-related protein 1A13.1e-1452.17Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        M W + +AAYAQ YA +R  DC MIHS G YGEN+AA  + +   A AVK+W +EK  YD+ SN C  G
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

Arabidopsis top hitse value%identityAlignment
AT1G50050.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein2.6e-1656.72Show/hide
Query:  WSNTVAAYAQAYAEKRKGDCAMIHST-GLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVG
        W   VAAYA  YA  RK DC++  ST G YGEN+A G  + FTG  AV LWVNEKP Y++T+N C+G
Subjt:  WSNTVAAYAQAYAEKRKGDCAMIHST-GLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVG

AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein2.4e-1753.73Show/hide
Query:  WSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG
        W  T+AAYA  Y+  RK DC ++HS G YGEN+A G  S F+   AVKLWV+EKP Y +  N C GG
Subjt:  WSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG

AT2G14580.1 basic pathogenesis-related protein 11.9e-1450Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVG
        MQW   +AAYA+ YA + KGDC ++HS G YGEN+A     + +G  AV LWVNEK  Y++ +N C G
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVG

AT2G14610.1 pathogenesis-related gene 15.0e-1550Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVG
        MQW   VAAYA++YAE+ +G+C +IHS G YGEN+A G   + +G  AV +WV+EK  Y++ +N C G
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVG

AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein1.4e-1456.06Show/hide
Query:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKC
        ++W   VAAYA+ YA +RKGDCAM HS+G YGENIA    S  TG  AV +WV+E+  YD+ SN C
Subjt:  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCAGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCTGTACGGGGAAAACATAGCCGC
GGGCTACTACTCTGAGTTCACTGGGGCGGATGCGGTGAAGCTGTGGGTGAACGAGAAGCCGTTGTATGATCATACATCGAATAAATGCGTGGGTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCAGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCTGTACGGGGAAAACATAGCCGC
GGGCTACTACTCTGAGTTCACTGGGGCGGATGCGGTGAAGCTGTGGGTGAACGAGAAGCCGTTGTATGATCATACATCGAATAAATGCGTGGGTGGTTAA
Protein sequenceShow/hide protein sequence
MQWSNTVAAYAQAYAEKRKGDCAMIHSTGLYGENIAAGYYSEFTGADAVKLWVNEKPLYDHTSNKCVGG