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CmoCh04G021180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G021180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 12-like
Genome locationCmo_Chr04:13757246..13757638
RNA-Seq ExpressionCmoCh04G021180
SyntenyCmoCh04G021180
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039618 - CLAVATA3/ESR (CLE)-related protein 9/10/11/12/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3958485.1 hypothetical protein CMV_016625 [Castanea mollissima]1.9e-1750Show/hide
Query:  MTLKISHLLFTMLWISLLILL-HQLNIFNAK-MNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPH------PQPNRPRKHSRPAVKLE-PPDSA
        M LK+S ++F  LW+SLL+LL HQL  F +K +N K I  IT+S +  SNHPL TRKVLAS+ DFTPF  H       Q  + + H + +  +   PD  
Subjt:  MTLKISHLLFTMLWISLLILL-HQLNIFNAK-MNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPH------PQPNRPRKHSRPAVKLE-PPDSA

Query:  ADDVDPLYGVEKRRVPNGPNPLHN
          ++DP YGVEKRRVP GPNPLH+
Subjt:  ADDVDPLYGVEKRRVPNGPNPLHN

KAG6601759.1 CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4998.1Show/hide
Query:  MLWIS-LLILLHQLNIFNAKMNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGP
        MLWIS LLILLHQLNIFNAKMNCKSIPNITFSYSSSSNHPLTTRK LASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGP
Subjt:  MLWIS-LLILLHQLNIFNAKMNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGP

Query:  NPLHN
        NPLHN
Subjt:  NPLHN

KAG7032483.1 CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-4198.82Show/hide
Query:  MNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        MNCKSIPNITFSYSSSSNHPLTTRK LASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
Subjt:  MNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

XP_022775823.1 CLAVATA3/ESR (CLE)-related protein 12-like [Durio zibethinus]7.2e-1750.86Show/hide
Query:  MTLKISHLLFTMLWIS-LLILLHQLNIFNAKMNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLY
        M  K+SHL+FT+LW+S LL+LLH+ N F  K+N K   +ITF  SS S++PL +RKV ASK DFTPF  H Q  + +    P    +  + A  ++DP Y
Subjt:  MTLKISHLLFTMLWIS-LLILLHQLNIFNAKMNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLY

Query:  GVEKRRVPNGPNPLHN
        GVEKR VP GPNPLH+
Subjt:  GVEKRRVPNGPNPLHN

XP_023903065.1 CLAVATA3/ESR (CLE)-related protein 12 [Quercus suber]5.0e-1851.67Show/hide
Query:  MTLKISHLLFTMLWISLLILL-HQLNIFNAK-MNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRK--HSRPAVKLE-PPDSAADDV
        M LK+S ++F  LW+SLL+LL HQL  F +K +N K I  IT+S +  SNHPL TRKVLAS+ DFTPF  H Q  + ++  H + +  +   PD    ++
Subjt:  MTLKISHLLFTMLWISLLILL-HQLNIFNAK-MNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRK--HSRPAVKLE-PPDSAADDV

Query:  DPLYGVEKRRVPNGPNPLHN
        DP YGVEKRRVP GPNPLH+
Subjt:  DPLYGVEKRRVPNGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KPQ3 Uncharacterized protein1.4e-3471.79Show/hide
Query:  MTLKISHLLFTMLWIS-LLILLHQLNIFNAKMNCKSIPNITFS-YSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPL
        MTLKISH LFTMLWIS LL+LLH+LNIF AKMN +  P ITFS YSSSSNHPL TRKVL SKVDFTPFF H  PN+PRKHS P       + A  D+DP 
Subjt:  MTLKISHLLFTMLWIS-LLILLHQLNIFNAKMNCKSIPNITFS-YSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPL

Query:  YGVEKRRVPNGPNPLHN
        YGVEKRRVP GPNPLH+
Subjt:  YGVEKRRVPNGPNPLHN

A0A2N9J7P0 Uncharacterized protein2.7e-1747.86Show/hide
Query:  LKISHLLFTMLWISLLI-LLHQLNIFNAKMNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRK--HSRPAVKLE-PPDSAADDVDPL
        +K+S ++F  LW+SL++ L HQ     +K+N K I  +T+S  S  +HPL TRKVLASK DFTPF  H Q  + ++  HS+ +  +   P+ A  ++DP 
Subjt:  LKISHLLFTMLWISLLI-LLHQLNIFNAKMNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRK--HSRPAVKLE-PPDSAADDVDPL

Query:  YGVEKRRVPNGPNPLHN
        YGVEKRRVP GPNPLH+
Subjt:  YGVEKRRVPNGPNPLHN

A0A6J1BM88 CLAVATA3/ESR (CLE)-related protein 12-like4.5e-1752.14Show/hide
Query:  MTLKISHLLF-TMLWISLL-ILLHQLNIFNAKMNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPL
        M  K+SHL+F T+LW+SLL +LLH+ + F  K+N +   +ITF  SS S +PL +RKV+ASK DFTPF  H Q  +  KHS P +K +   +A  ++DP 
Subjt:  MTLKISHLLF-TMLWISLL-ILLHQLNIFNAKMNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPL

Query:  YGVEKRRVPNGPNPLHN
        YGVEKR VP GPNPLH+
Subjt:  YGVEKRRVPNGPNPLHN

A0A6P6BFB8 CLAVATA3/ESR (CLE)-related protein 12-like3.5e-1750.86Show/hide
Query:  MTLKISHLLFTMLWIS-LLILLHQLNIFNAKMNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLY
        M  K+SHL+FT+LW+S LL+LLH+ N F  K+N K   +ITF  SS S++PL +RKV ASK DFTPF  H Q  + +    P    +  + A  ++DP Y
Subjt:  MTLKISHLLFTMLWIS-LLILLHQLNIFNAKMNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPLY

Query:  GVEKRRVPNGPNPLHN
        GVEKR VP GPNPLH+
Subjt:  GVEKRRVPNGPNPLHN

A0A7N2KK79 Uncharacterized protein8.3e-1950.85Show/hide
Query:  MTLKISHLLFTMLWISLLILL-HQL-NIFNAKMNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLE-PPDSAADDVDP
        M LK+S ++F  LW+SLL+LL HQL ++ +  +N K I  IT+S +  SNHPL TRKVLAS+ DFTPF  H Q  + + H + +  +   PD    ++DP
Subjt:  MTLKISHLLFTMLWISLLILL-HQL-NIFNAKMNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLE-PPDSAADDVDP

Query:  LYGVEKRRVPNGPNPLHN
         YGVEKRRVP GPNPLH+
Subjt:  LYGVEKRRVPNGPNPLHN

SwissProt top hitse value%identityAlignment
Q29PU4 CLAVATA3/ESR (CLE)-related protein 125.0e-1342.64Show/hide
Query:  LLLSPSSSSMTLKISHLLFTMLWISL-LILLHQLNIFNAK----MNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLE
        +L   SSSSM LK S +LF +LW+SL  +LLH L   N +    +N      +   Y S   + L +RKVL+ + DFTPF  H + N    H R   + +
Subjt:  LLLSPSSSSMTLKISHLLFTMLWISL-LILLHQLNIFNAK----MNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLE

Query:  PPDSAADDVDPLYGVEKRRVPNGPNPLHN
              D++DP YGVEKRRVP+GPNPLH+
Subjt:  PPDSAADDVDPLYGVEKRRVPNGPNPLHN

Q6NMF0 CLAVATA3/ESR (CLE)-related protein 134.5e-0636.75Show/hide
Query:  TLKISHLLFTMLWISLLILLHQLNIFN--AKMNCKSIPNITFSYSSSSNHPLTTRKVLASKV-DFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPL
        T ++SH+L  +LWISLLI +  + +F   +       P+   +  +    P   R+ LA K  DFTPF    + +  RK + PA           ++DP 
Subjt:  TLKISHLLFTMLWISLLILLHQLNIFN--AKMNCKSIPNITFSYSSSSNHPLTTRKVLASKV-DFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPL

Query:  YGVEKRRVPNGPNPLHN
        YGVEKR VP+GPNPLH+
Subjt:  YGVEKRRVPNGPNPLHN

Arabidopsis top hitse value%identityAlignment
AT1G26600.1 CLAVATA3/ESR-RELATED 98.8e-0552.38Show/hide
Query:  RPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        R  + SR    L PP     ++DP YGV+KR VP+GPNPLHN
Subjt:  RPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

AT1G68795.1 CLAVATA3/ESR-RELATED 123.6e-1442.64Show/hide
Query:  LLLSPSSSSMTLKISHLLFTMLWISL-LILLHQLNIFNAK----MNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLE
        +L   SSSSM LK S +LF +LW+SL  +LLH L   N +    +N      +   Y S   + L +RKVL+ + DFTPF  H + N    H R   + +
Subjt:  LLLSPSSSSMTLKISHLLFTMLWISL-LILLHQLNIFNAK----MNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLE

Query:  PPDSAADDVDPLYGVEKRRVPNGPNPLHN
              D++DP YGVEKRRVP+GPNPLH+
Subjt:  PPDSAADDVDPLYGVEKRRVPNGPNPLHN

AT1G69320.1 CLAVATA3/ESR-RELATED 105.7e-0450Show/hide
Query:  RKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        R H      L  P     ++D  YGVEKR VP+GPNPLHN
Subjt:  RKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

AT1G73965.1 CLAVATA3/ESR-RELATED 133.2e-0736.75Show/hide
Query:  TLKISHLLFTMLWISLLILLHQLNIFN--AKMNCKSIPNITFSYSSSSNHPLTTRKVLASKV-DFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPL
        T ++SH+L  +LWISLLI +  + +F   +       P+   +  +    P   R+ LA K  DFTPF    + +  RK + PA           ++DP 
Subjt:  TLKISHLLFTMLWISLLILLHQLNIFN--AKMNCKSIPNITFSYSSSSNHPLTTRKVLASKV-DFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDVDPL

Query:  YGVEKRRVPNGPNPLHN
        YGVEKR VP+GPNPLH+
Subjt:  YGVEKRRVPNGPNPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCCTTTCAAACCCTTCTTCTTTCTCCTTCTTCTTCCTCCATGACATTGAAAATTTCACACCTCCTTTTTACCATGCTTTGGATCTCTCTTCTCATATTACTTCA
TCAACTAAACATCTTCAACGCCAAAATGAATTGCAAATCAATACCAAACATCACATTTTCCTATTCTTCCTCTTCTAACCATCCCTTGACTACAAGGAAAGTACTGGCTA
GCAAGGTTGACTTCACTCCCTTTTTTCCCCACCCGCAGCCAAATCGACCCAGAAAGCATTCACGACCCGCTGTCAAACTCGAACCGCCCGACTCTGCTGCAGACGACGTT
GATCCGCTCTACGGGGTTGAGAAGCGGCGTGTTCCTAATGGTCCAAACCCATTGCACAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCCTTTCAAACCCTTCTTCTTTCTCCTTCTTCTTCCTCCATGACATTGAAAATTTCACACCTCCTTTTTACCATGCTTTGGATCTCTCTTCTCATATTACTTCA
TCAACTAAACATCTTCAACGCCAAAATGAATTGCAAATCAATACCAAACATCACATTTTCCTATTCTTCCTCTTCTAACCATCCCTTGACTACAAGGAAAGTACTGGCTA
GCAAGGTTGACTTCACTCCCTTTTTTCCCCACCCGCAGCCAAATCGACCCAGAAAGCATTCACGACCCGCTGTCAAACTCGAACCGCCCGACTCTGCTGCAGACGACGTT
GATCCGCTCTACGGGGTTGAGAAGCGGCGTGTTCCTAATGGTCCAAACCCATTGCACAATTGA
Protein sequenceShow/hide protein sequence
MLPFQTLLLSPSSSSMTLKISHLLFTMLWISLLILLHQLNIFNAKMNCKSIPNITFSYSSSSNHPLTTRKVLASKVDFTPFFPHPQPNRPRKHSRPAVKLEPPDSAADDV
DPLYGVEKRRVPNGPNPLHN