; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G021420 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G021420
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionzinc finger protein JAGGED-like
Genome locationCmo_Chr04:14750424..14751839
RNA-Seq ExpressionCmoCh04G021420
SyntenyCmoCh04G021420
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0007275 - multicellular organism development (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR031113 - Zinc finger protein JAGGED-like
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601780.1 Zinc finger protein JAGGED, partial [Cucurbita argyrosperma subsp. sororia]4.0e-14293.14Show/hide
Query:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA
        + RSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQ               +RETETLNRA
Subjt:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA

Query:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI
        RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI
Subjt:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI

Query:  NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF
        NDYYVGHVLGNPAQCSHQTMNYGST SSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF
Subjt:  NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF

KAG7032496.1 Zinc finger protein JAGGED, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-13590.25Show/hide
Query:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA
        M RSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQAL                        +RETETLNRA
Subjt:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA

Query:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI
        RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI
Subjt:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI

Query:  NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF
        NDYYVGHVLGNPAQCSHQTMNYGST SSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF
Subjt:  NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF

XP_022953929.1 zinc finger protein JAGGED-like [Cucurbita moschata]7.3e-14494.22Show/hide
Query:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA
        MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQ               +RETETLNRA
Subjt:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA

Query:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI
        RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI
Subjt:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI

Query:  NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF
        NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF
Subjt:  NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF

XP_022971830.1 zinc finger protein JAGGED-like [Cucurbita maxima]4.0e-14293.14Show/hide
Query:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA
        MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQ               +RETETLNRA
Subjt:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA

Query:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI
        RQLVFSNDNLAVQSPPPHLGCCHSM PGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI
Subjt:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI

Query:  NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF
        NDYYVGHVLGNPAQCSHQTMNYGST SSMESSSYTCIGAPVGPAATFGGRESG GRDGSQQQRLDVPSSINRFQDGF
Subjt:  NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF

XP_023538934.1 zinc finger protein JAGGED-like [Cucurbita pepo subsp. pepo]1.7e-14093.14Show/hide
Query:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA
        MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQ               +RETETLNRA
Subjt:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA

Query:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI
        RQLVFSNDNLAVQS PPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI
Subjt:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI

Query:  NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF
        NDYYVGHVLGNPAQCSHQTMNYGST SSMESSSYTCIGAPVGPAATFGGRESG GRDGSQQQRLDVPSSINRFQDGF
Subjt:  NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF

TrEMBL top hitse value%identityAlignment
A0A0A0KTC2 C2H2-type domain-containing protein1.6e-11280Show/hide
Query:  RSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQ
        RS+GSPLDLNNLPEDYIRD KQIIED+S+GHRKKKSG KEG EESGKVYECRFCSLKFCKSQALGGHMNRHRQ               +RETETLNRARQ
Subjt:  RSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQ

Query:  LVFSNDNLAVQSPPPHLGCCHSMTPGSYHTA-GSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASIN
        LVFSNDNLA Q PPPHLGCCHSM P +YH+A GSG VGSD TL LRFPTRMF GSSP TLL P P PPP P  HQPYLY+SP+RPSSFPSYYPPPQASIN
Subjt:  LVFSNDNLAVQSPPPHLGCCHSMTPGSYHTA-GSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASIN

Query:  DYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAAT-FGGRESG--SGRDGS-QQQRLDVPSSINRFQDGF
        DYYVGHVLGNP+QCSHQT+NYGS  SS+ESSSYTCIGAPVG AA  FGGR+ G   GRDGS QQQRLDVPSSINRFQDGF
Subjt:  DYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAAT-FGGRESG--SGRDGS-QQQRLDVPSSINRFQDGF

A0A1S3CQ11 zinc finger protein JAGGED1.4e-11179.79Show/hide
Query:  MRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRAR
        MRS+GSPLDLNNLPEDYIRD KQIIED+S+GHRKKKSG KEG EESGKVYECRFCSLKFCKSQALGGHMNRHRQ               +RETETLNRAR
Subjt:  MRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRAR

Query:  QLVFSNDNLAVQ-SPPPHLGCCHSMTPGSYHTA-GSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQAS
        QLVFSNDNLA Q  PPPHLGCCHSM P +YHTA GSG VGSD TL LRFPTRMF GSSP TLL P P PPP P  HQPYLY+SP+RPSSFPSYYPPPQAS
Subjt:  QLVFSNDNLAVQ-SPPPHLGCCHSMTPGSYHTA-GSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQAS

Query:  INDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAAT-FGGRESG--SGRDGS-QQQRLDVPSSINRFQDGF
        INDYYVGHVLGNP+QCSHQT+NYGS  S +ESSSYTCIGAPVG AA  FGGR+ G   GRDGS QQQRLDVPSSINRFQDGF
Subjt:  INDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAAT-FGGRESG--SGRDGS-QQQRLDVPSSINRFQDGF

A0A5A7U1F5 Zinc finger protein JAGGED2.1e-11280Show/hide
Query:  RSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQ
        RS+GSPLDLNNLPEDYIRD KQIIED+S+GHRKKKSG KEG EESGKVYECRFCSLKFCKSQALGGHMNRHRQ               +RETETLNRARQ
Subjt:  RSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQ

Query:  LVFSNDNLAVQSPPPHLGCCHSMTPGSYHTA-GSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASIN
        LVFSNDNLA Q PPPHLGCCHSM P +YHTA GSG VGSD TL LRFPTRMF GSSP TLL P P PPP P  HQPYLY+SP+RPSSFPSYYPPPQASIN
Subjt:  LVFSNDNLAVQSPPPHLGCCHSMTPGSYHTA-GSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASIN

Query:  DYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAAT-FGGRESG--SGRDGS-QQQRLDVPSSINRFQDGF
        DYYVGHVLGNP+QCSHQT+NYGS  S +ESSSYTCIGAPVG AA  FGGR+ G   GRDGS QQQRLDVPSSINRFQDGF
Subjt:  DYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAAT-FGGRESG--SGRDGS-QQQRLDVPSSINRFQDGF

A0A6J1GRC2 zinc finger protein JAGGED-like3.5e-14494.22Show/hide
Query:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA
        MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQ               +RETETLNRA
Subjt:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA

Query:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI
        RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI
Subjt:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI

Query:  NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF
        NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF
Subjt:  NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF

A0A6J1I6U1 zinc finger protein JAGGED-like1.9e-14293.14Show/hide
Query:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA
        MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQ               +RETETLNRA
Subjt:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA

Query:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI
        RQLVFSNDNLAVQSPPPHLGCCHSM PGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI
Subjt:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASI

Query:  NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF
        NDYYVGHVLGNPAQCSHQTMNYGST SSMESSSYTCIGAPVGPAATFGGRESG GRDGSQQQRLDVPSSINRFQDGF
Subjt:  NDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF

SwissProt top hitse value%identityAlignment
Q6S591 Zinc finger protein JAGGED2.7e-4042.36Show/hide
Query:  MRSQGSPLDLNNLPEDYIRD-RKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA
        MR + + LDLNNLP+D+ +D  KQ +E+ S+  ++KK G KEG +ESGKVYECRFCSLKFCKSQALGGHMNRHRQ               +RETETLN+A
Subjt:  MRSQGSPLDLNNLPEDYIRD-RKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA

Query:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTL--SLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQA
        RQLV+ ND +   +PP        ++P  YH        +DPT+  S+     ++PGSS T L+P  P PPPPPP   PY  +  S  + F  YY     
Subjt:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTL--SLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQA

Query:  SINDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPV--------GPAATFGGRESGSGRDG-SQQQRLD--VPSSINRFQD
         +N  + G    +P+     T        S     YTC+GAP+        GP+      E   GRDG + +QRLD  +   INRFQD
Subjt:  SINDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPV--------GPAATFGGRESGSGRDG-SQQQRLD--VPSSINRFQD

Q6S592 Zinc finger protein JAGGED-like8.2e-2138.21Show/hide
Query:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGG-KEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNR
        M   + + LDLNNLP+D  RD     E+  +      SGG +E   + GK YECRFCSLKF KSQALGGHMNRHRQ               +RETE+LN+
Subjt:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGG-KEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNR

Query:  ARQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLS-LRFPTRMF--PGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPP
        AR+LV  ND+      PPH G      P   +  G   +G       + +P R F  PGSS    L P            PYLY         P   P P
Subjt:  ARQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLS-LRFPTRMF--PGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPP

Query:  QASINDYYVGHVLGNPAQCSHQTM-NYGSTRSSMESSSYTCIGAPV
        Q + N       +GN     HQT+ N      ++  SSYT IGAPV
Subjt:  QASINDYYVGHVLGNPAQCSHQTM-NYGSTRSSMESSSYTCIGAPV

Q9LG97 Zinc finger protein STAMENLESS 12.1e-3239.86Show/hide
Query:  RSQGSPLDLNNLPEDYIRDRKQIIEDTSTGH---------RKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRE
        R +GSPLDLNNLP+++    KQ +E ++T            KKKS G  G +E+GKVYECRFCSLKFCKSQALGGHMNRHRQ               +RE
Subjt:  RSQGSPLDLNNLPEDYIRDRKQIIEDTSTGH---------RKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRE

Query:  TETLNRARQLVFSNDNLA-----------------VQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQ
        TETLNRARQLVF ND+LA                   +PPP +     M  G +     GGVG DP + LR              + P  SPP PPP H 
Subjt:  TETLNRARQLVFSNDNLA-----------------VQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQ

Query:  PYLYSSPSRPS-----SFPSYYPPP-----QASINDYYVGH------VLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPV
         YLY++ + PS     S+P+ YP P      A++ DY +GH       L  P    H+             +S++C GAP+
Subjt:  PYLYSSPSRPS-----SFPSYYPPP-----QASINDYYVGH------VLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPV

Arabidopsis top hitse value%identityAlignment
AT1G13400.1 C2H2 and C2HC zinc fingers superfamily protein5.8e-2238.21Show/hide
Query:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGG-KEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNR
        M   + + LDLNNLP+D  RD     E+  +      SGG +E   + GK YECRFCSLKF KSQALGGHMNRHRQ               +RETE+LN+
Subjt:  MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGG-KEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNR

Query:  ARQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLS-LRFPTRMF--PGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPP
        AR+LV  ND+      PPH G      P   +  G   +G       + +P R F  PGSS    L P            PYLY         P   P P
Subjt:  ARQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLS-LRFPTRMF--PGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPP

Query:  QASINDYYVGHVLGNPAQCSHQTM-NYGSTRSSMESSSYTCIGAPV
        Q + N       +GN     HQT+ N      ++  SSYT IGAPV
Subjt:  QASINDYYVGHVLGNPAQCSHQTM-NYGSTRSSMESSSYTCIGAPV

AT1G68480.1 C2H2 and C2HC zinc fingers superfamily protein1.9e-4142.36Show/hide
Query:  MRSQGSPLDLNNLPEDYIRD-RKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA
        MR + + LDLNNLP+D+ +D  KQ +E+ S+  ++KK G KEG +ESGKVYECRFCSLKFCKSQALGGHMNRHRQ               +RETETLN+A
Subjt:  MRSQGSPLDLNNLPEDYIRD-RKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRA

Query:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTL--SLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQA
        RQLV+ ND +   +PP        ++P  YH        +DPT+  S+     ++PGSS T L+P  P PPPPPP   PY  +  S  + F  YY     
Subjt:  RQLVFSNDNLAVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTL--SLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQA

Query:  SINDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPV--------GPAATFGGRESGSGRDG-SQQQRLD--VPSSINRFQD
         +N  + G    +P+     T        S     YTC+GAP+        GP+      E   GRDG + +QRLD  +   INRFQD
Subjt:  SINDYYVGHVLGNPAQCSHQTMNYGSTRSSMESSSYTCIGAPV--------GPAATFGGRESGSGRDG-SQQQRLD--VPSSINRFQD

AT5G01860.1 C2H2 and C2HC zinc fingers superfamily protein1.1e-0428.74Show/hide
Query:  NEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAVQSPPPHLGCCHSMTPGSY
        NE   +V+ C FC  +F  SQALGGH N H+Q                 E     R +++  +   L++ S  P  G   S +   Y
Subjt:  NEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNLAVQSPPPHLGCCHSMTPGSY

AT5G04390.1 C2H2-type zinc finger family protein3.2e-0437.14Show/hide
Query:  SPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGG--KEGNEESGKVYECRFCSLKFCKSQALGGHMNRHR
        S LDL      Y  D   ++  T+T  +   S      G     KV+EC  C  +F   QALGGHM RHR
Subjt:  SPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGG--KEGNEESGKVYECRFCSLKFCKSQALGGHMNRHR

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein5.5e-0440Show/hide
Query:  RKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKL
        R +++     +  + ++YEC FC   F  +QALGGHMN HR+ +L
Subjt:  RKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGATCCCAAGGCAGCCCTTTAGACCTCAACAACTTACCAGAAGATTATATCAGAGATCGCAAACAGATTATCGAAGATACCTCTACTGGTCATCGGAAAAAGAA
AAGTGGAGGGAAGGAGGGAAATGAGGAGTCCGGAAAGGTGTATGAATGCAGGTTTTGTTCCCTCAAGTTCTGCAAATCCCAGGCTCTTGGTGGCCACATGAACCGCCACC
GCCAAGGCAAACTCACTTTTCTTTTCTTTTTGGCTTTTGTTTTTGTTAATGATAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAATCTG
GCTGTCCAATCTCCTCCTCCTCATTTAGGGTGCTGCCACTCAATGACACCGGGGAGCTACCACACAGCTGGCAGCGGCGGCGTAGGAAGTGATCCAACGTTGTCTCTCAG
ATTCCCAACAAGAATGTTCCCAGGCTCTTCCCCAACTACCCTTCTGCCGCCGACCCCATCACCACCGCCTCCTCCGCCACCTCACCAGCCATATCTATACAGCTCCCCCT
CGCGGCCATCCAGTTTCCCTTCATACTATCCTCCACCGCAAGCCTCCATCAACGACTACTATGTGGGTCACGTCTTAGGGAACCCCGCACAATGCAGCCACCAGACCATG
AACTACGGGTCGACGAGAAGCTCCATGGAGTCGAGTAGCTACACTTGCATCGGAGCTCCGGTGGGTCCAGCAGCGACGTTCGGCGGACGGGAGAGCGGTAGCGGAAGAGA
CGGATCACAGCAGCAGCGTTTGGACGTTCCCTCTTCGATCAATCGGTTTCAAGATGGGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAGATCCCAAGGCAGCCCTTTAGACCTCAACAACTTACCAGAAGATTATATCAGAGATCGCAAACAGATTATCGAAGATACCTCTACTGGTCATCGGAAAAAGAA
AAGTGGAGGGAAGGAGGGAAATGAGGAGTCCGGAAAGGTGTATGAATGCAGGTTTTGTTCCCTCAAGTTCTGCAAATCCCAGGCTCTTGGTGGCCACATGAACCGCCACC
GCCAAGGCAAACTCACTTTTCTTTTCTTTTTGGCTTTTGTTTTTGTTAATGATAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAATCTG
GCTGTCCAATCTCCTCCTCCTCATTTAGGGTGCTGCCACTCAATGACACCGGGGAGCTACCACACAGCTGGCAGCGGCGGCGTAGGAAGTGATCCAACGTTGTCTCTCAG
ATTCCCAACAAGAATGTTCCCAGGCTCTTCCCCAACTACCCTTCTGCCGCCGACCCCATCACCACCGCCTCCTCCGCCACCTCACCAGCCATATCTATACAGCTCCCCCT
CGCGGCCATCCAGTTTCCCTTCATACTATCCTCCACCGCAAGCCTCCATCAACGACTACTATGTGGGTCACGTCTTAGGGAACCCCGCACAATGCAGCCACCAGACCATG
AACTACGGGTCGACGAGAAGCTCCATGGAGTCGAGTAGCTACACTTGCATCGGAGCTCCGGTGGGTCCAGCAGCGACGTTCGGCGGACGGGAGAGCGGTAGCGGAAGAGA
CGGATCACAGCAGCAGCGTTTGGACGTTCCCTCTTCGATCAATCGGTTTCAAGATGGGTTCTAA
Protein sequenceShow/hide protein sequence
MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKFCKSQALGGHMNRHRQGKLTFLFFLAFVFVNDRETETLNRARQLVFSNDNL
AVQSPPPHLGCCHSMTPGSYHTAGSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPAQCSHQTM
NYGSTRSSMESSSYTCIGAPVGPAATFGGRESGSGRDGSQQQRLDVPSSINRFQDGF