; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G021450 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G021450
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTranslocase subunit seca
Genome locationCmo_Chr04:14964484..14966865
RNA-Seq ExpressionCmoCh04G021450
SyntenyCmoCh04G021450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601783.1 hypothetical protein SDJN03_07016, partial [Cucurbita argyrosperma subsp. sororia]3.7e-9398.27Show/hide
Query:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
        MNQVAVQRNVFSVREEM RAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLF KGGCDLENFNSS TQLASSPPYLCGTPPSRVAN
Subjt:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN

Query:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

KAG7032498.1 hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma]7.4e-9498.84Show/hide
Query:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
        MNQVAVQRNVFSVREEM RAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLF KGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
Subjt:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN

Query:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

XP_022923501.1 uncharacterized protein LOC111431174 [Cucurbita moschata]3.0e-95100Show/hide
Query:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
        MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
Subjt:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN

Query:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

XP_022971782.1 uncharacterized protein LOC111470460 [Cucurbita maxima]1.1e-9297.11Show/hide
Query:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
        MNQVAVQRNVFSVREEM RAADTDRRERLVCPKPRRLGLIN T NDNPFRHRFDS+AANDALDLLFFKGGCDLENF SSSTQLASSPPYLCGTPPSRVAN
Subjt:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN

Query:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

XP_023538993.1 uncharacterized protein LOC111799757 [Cucurbita pepo subsp. pepo]1.4e-9297.69Show/hide
Query:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
        MNQVAVQRNVFSVREEM RAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFK GCDLENFNS+STQLASSPPYLCGTPPSRVAN
Subjt:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN

Query:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PLIQDARFG EKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

TrEMBL top hitse value%identityAlignment
A0A0A0KRF1 Uncharacterized protein5.1e-6480.75Show/hide
Query:  VREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEK
        V EEM  AA TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLF KGGC LENFNSS+ QLASSPPY CG+PPSRVANPLIQDARFG+EK
Subjt:  VREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEK

Query:  PKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PK+LP+FSP  A PP SPPPS  R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

A0A1S3CR46 uncharacterized protein LOC1035033855.6e-6379.5Show/hide
Query:  VREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEK
        V EEM R+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLF KGGC LE FNSS+TQLASS PY CG+PPSRVANPLIQDARFG+EK
Subjt:  VREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEK

Query:  PKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PK+LP+FS   A PP SPPPS  R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

A0A5D3C147 Uncharacterized protein1.2e-6280Show/hide
Query:  RAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPV
        R+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLF KGGC LE FNSS+TQLASS PY CG+PPSRVANPLIQDARFG+EKPK+LP+
Subjt:  RAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPV

Query:  FSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        FS   A PP SPPPS  R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Subjt:  FSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

A0A6J1E6Z2 uncharacterized protein LOC1114311741.5e-95100Show/hide
Query:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
        MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
Subjt:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN

Query:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

A0A6J1I2X1 uncharacterized protein LOC1114704605.2e-9397.11Show/hide
Query:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN
        MNQVAVQRNVFSVREEM RAADTDRRERLVCPKPRRLGLIN T NDNPFRHRFDS+AANDALDLLFFKGGCDLENF SSSTQLASSPPYLCGTPPSRVAN
Subjt:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVAN

Query:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein1.6e-2240Show/hide
Query:  MNQVAVQRNVFSVREEMTR-AADTDRRERLVCPKPRRLGLINTTVNDN---PFRHRF---DSVAANDALDLLFFKGGCDLENFNSSSTQLASSPP-YLCG
        MN   +Q+N F   EEM R AA +DRR+ ++CPKPRR+G +N   + +      H+    +S + ++ LD +  KGG          T+   +PP +  G
Subjt:  MNQVAVQRNVFSVREEMTR-AADTDRRERLVCPKPRRLGLINTTVNDN---PFRHRF---DSVAANDALDLLFFKGGCDLENFNSSSTQLASSPP-YLCG

Query:  TPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYS--PPPSTDRNGGWV--RPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        +PPSRV+NPL +D+ F  E   +L V SP  + P  +   PPS+ RNG  V    +FGN P VR+ GFDC  DR   NRSI  LA
Subjt:  TPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYS--PPPSTDRNGGWV--RPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

AT1G13390.2 unknown protein1.6e-2240Show/hide
Query:  MNQVAVQRNVFSVREEMTR-AADTDRRERLVCPKPRRLGLINTTVNDN---PFRHRF---DSVAANDALDLLFFKGGCDLENFNSSSTQLASSPP-YLCG
        MN   +Q+N F   EEM R AA +DRR+ ++CPKPRR+G +N   + +      H+    +S + ++ LD +  KGG          T+   +PP +  G
Subjt:  MNQVAVQRNVFSVREEMTR-AADTDRRERLVCPKPRRLGLINTTVNDN---PFRHRF---DSVAANDALDLLFFKGGCDLENFNSSSTQLASSPP-YLCG

Query:  TPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYS--PPPSTDRNGGWV--RPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        +PPSRV+NPL +D+ F  E   +L V SP  + P  +   PPS+ RNG  V    +FGN P VR+ GFDC  DR   NRSI  LA
Subjt:  TPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYS--PPPSTDRNGGWV--RPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

AT1G68490.1 unknown protein1.2e-3046.81Show/hide
Query:  MNQVAVQRNVFSVREEMTRAADTDRRER----LVCPKPRRLGLINTTVNDNP-----FRHRF---DSVAANDALDLLFFKGGCDLENFNSSSTQLASSP-
        MN  AVQ N F+   ++ R++     ER    +VCPKPRR+GL N   + +      F H+    +S A  D LD++  K G   E  N    Q+  SP 
Subjt:  MNQVAVQRNVFSVREEMTRAADTDRRER----LVCPKPRRLGLINTTVNDNP-----FRHRF---DSVAANDALDLLFFKGGCDLENFNSSSTQLASSP-

Query:  PYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVA-PPPYSPPPSTDRNGGW-VRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
        P+LCG+PPSRVANPL QDARF +E   +  V  P++  PP  SP  S+ R GG  VR NFGN P VR+EGFDC LDR+ RN SIPALA
Subjt:  PYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVA-PPPYSPPPSTDRNGGW-VRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA

AT3G02555.1 unknown protein4.7e-2242.37Show/hide
Query:  MNQVAVQRNVFSVREEMTRAAD--TDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCD-LENFNSSSTQLASSPPYLCGTPPSR
        MN  ++Q+N F  REE        +   + +VCPKPRR    N  +   PFR  F    A+D  D    K G D L+ F    +  + SPP+  G+PPSR
Subjt:  MNQVAVQRNVFSVREEMTRAAD--TDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCD-LENFNSSSTQLASSPPYLCGTPPSR

Query:  VANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPA-VRIEGFDCRLDRERRNRSIPALA
         ANPL QDARFG+EK   L   SP ++P     P ++    G  R  FG  PA VR+EGFDC L+R+R N SIPA+A
Subjt:  VANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPA-VRIEGFDCRLDRERRNRSIPALA

AT5G16110.1 unknown protein1.3e-2744.39Show/hide
Query:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDL-------ENFNSSSTQLASSPPYLCGT
        MN   +Q+N F  REEM      DR++ +VCPKPRR+GL+   V   P R      AA    DL   K G +L       E+  +    L+SSPPY  G+
Subjt:  MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDL-------ENFNSSSTQLASSPPYLCGT

Query:  PPSRVANPLIQDARFGNEKPKMLPVFSPEVAP------PPYSPPPSTDRNGGWVRPNFG-NIPAVRIEGFDCRLDRERRNRSIPALA
        PPSR ANPL QDARF +EK   +   SP + P      P  S   S+  + G VR  FG N PAVR+EGFDC L+R+R+N SIPA+A
Subjt:  PPSRVANPLIQDARFGNEKPKMLPVFSPEVAP------PPYSPPPSTDRNGGWVRPNFG-NIPAVRIEGFDCRLDRERRNRSIPALA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGACGAGAGCTGCAGACACCGACCGCCGTGAACGACTTGTTTGCCCAAAGCCTCGCCGTCT
CGGACTCATTAACACCACCGTCAACGACAACCCATTTAGACATCGTTTTGATTCCGTAGCTGCTAATGATGCTTTGGATCTTCTCTTCTTTAAGGGAGGTTGTGATTTGG
AGAATTTTAACAGTAGTAGTACACAGTTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAACCCATTAATCCAAGACGCTAGATTTGGGAAC
GAGAAGCCAAAGATGCTCCCCGTCTTCTCGCCGGAGGTGGCTCCTCCTCCGTATTCGCCGCCTCCATCAACCGATCGGAATGGCGGCTGGGTTCGACCAAACTTCGGAAA
CATTCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAA
mRNA sequenceShow/hide mRNA sequence
TGCTGTTGCCCAATAATGTATTACCCTCTTTTCTCTCTCTGCTCCTTTTAATTTAATTTAATTTAATAATTAAGAAATCTGATTCTCATGTCGCCTTGCCCCATCTTATA
ACACGCTCCTCGTCTCCTTCCCCTTCCTTCCTCCCCTTTTTCTCTTTCCGCTCAACATTTTCAAGGGAAAATTCATCTCTGCTTACACTCCCTTTCCCTTCAGAGAGAAA
AAAGAATCAAAAAGGAAGAAGATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGACGAGAGCTGCAGACACCGACCGCCGTGAACGACTTGT
TTGCCCAAAGCCTCGCCGTCTCGGACTCATTAACACCACCGTCAACGACAACCCATTTAGACATCGTTTTGATTCCGTAGCTGCTAATGATGCTTTGGATCTTCTCTTCT
TTAAGGGAGGTTGTGATTTGGAGAATTTTAACAGTAGTAGTACACAGTTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAACCCATTAATC
CAAGACGCTAGATTTGGGAACGAGAAGCCAAAGATGCTCCCCGTCTTCTCGCCGGAGGTGGCTCCTCCTCCGTATTCGCCGCCTCCATCAACCGATCGGAATGGCGGCTG
GGTTCGACCAAACTTCGGAAACATTCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAATAAAAAC
CTAACCGATTTGAGGGGAGCCGATCCAATGATGTGGATGAAGAAGAAAAAAACATTTTTTTCTACAAATTAAAAAATTGAAATTTAGAAAAAGGAAGGTTTTTGAGAAAA
ACACCATTATTGTATATAACGTGGAAAGGAAATGAAAGTAAATATTATGTGAAGGAAAAGAGGGCGTTGTTAGGTTTGTGTCTATTTAGTTGAGTTGAGGGTTGATTGAG
AGAGAGAGAGAGAGAGAGAG
Protein sequenceShow/hide protein sequence
MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGN
EKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA