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CmoCh04G021470 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G021470
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 27
Genome locationCmo_Chr04:15011239..15011499
RNA-Seq ExpressionCmoCh04G021470
SyntenyCmoCh04G021470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063931.1 putative Clavata3/esr-related 43 [Cucumis melo var. makuwa]1.8e-1150.6Show/hide
Query:  GVTPNRQRRFLSTFLVMALFIWVVFCHQPRAVSARLFPENLEETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPDSLHN
        G TP+R+RR LS F ++  FIWVV  +Q  +  AR   E+  E    G  GSKEK       G R FE+NKRTVPSCPD LHN
Subjt:  GVTPNRQRRFLSTFLVMALFIWVVFCHQPRAVSARLFPENLEETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPDSLHN

KAG6579278.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]5.1e-1960.87Show/hide
Query:  GGVTPNRQRRFLSTFLVMALFIWVVFC---HQPRAVSARLFPENLE-ETHVGGGGGSKEKLLRKYFN----GMRGFEDNKRTVPSCPDSLHN
        G   P R+RRFLS+F ++  FIWVVFC   HQ  AV AR FP N + E  V GG GSKEKLLR YFN    G RGF++ KRTVPSCPD LHN
Subjt:  GGVTPNRQRRFLSTFLVMALFIWVVFC---HQPRAVSARLFPENLE-ETHVGGGGGSKEKLLRKYFN----GMRGFEDNKRTVPSCPDSLHN

KAG6601785.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3993.18Show/hide
Query:  MCGGVTPNRQRRFLSTFLVMALFIWVVFCHQPRAVSARLFPENL--EETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPDSLHN
        MCGGVTP RQRRFLST LVMALFIWVVFCHQP AVSARLFPENL  EETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPD LHN
Subjt:  MCGGVTPNRQRRFLSTFLVMALFIWVVFCHQPRAVSARLFPENL--EETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPDSLHN

KAG7016789.1 hypothetical protein SDJN02_21899, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-1960.87Show/hide
Query:  GGVTPNRQRRFLSTFLVMALFIWVVFC---HQPRAVSARLFPENLE-ETHVGGGGGSKEKLLRKYFN----GMRGFEDNKRTVPSCPDSLHN
        G   P R+RRFLS+F ++  FIWVVFC   HQ  AV AR FP N + E  V GG GSKEKLLR YFN    G RGF++ KRTVPSCPD LHN
Subjt:  GGVTPNRQRRFLSTFLVMALFIWVVFC---HQPRAVSARLFPENLE-ETHVGGGGGSKEKLLRKYFN----GMRGFEDNKRTVPSCPDSLHN

OAY31320.1 hypothetical protein MANES_14G102600v8 [Manihot esculenta]2.2e-0642.05Show/hide
Query:  LSTFLVMALFIWVVFCHQPRAVSARLFPE-----NLEETHVG--GGGGSKEKLLRKYFNG--------MRGFEDNKRTVPSCPDSLHN
        L  FL+  L IWV  C   +A + R+FP+     NL++ ++       SKE L  K+FNG         +GFE+NKR VPSCPD LHN
Subjt:  LSTFLVMALFIWVVFCHQPRAVSARLFPE-----NLEETHVG--GGGGSKEKLLRKYFNG--------MRGFEDNKRTVPSCPDSLHN

TrEMBL top hitse value%identityAlignment
A0A2C9UKL3 Uncharacterized protein1.1e-0642.05Show/hide
Query:  LSTFLVMALFIWVVFCHQPRAVSARLFPE-----NLEETHVG--GGGGSKEKLLRKYFNG--------MRGFEDNKRTVPSCPDSLHN
        L  FL+  L IWV  C   +A + R+FP+     NL++ ++       SKE L  K+FNG         +GFE+NKR VPSCPD LHN
Subjt:  LSTFLVMALFIWVVFCHQPRAVSARLFPE-----NLEETHVG--GGGGSKEKLLRKYFNG--------MRGFEDNKRTVPSCPDSLHN

A0A2C9VNI0 Uncharacterized protein1.4e-0642.05Show/hide
Query:  LSTFLVMALFIWVVFCHQPRAVSARLFPEN-----LEETHV--GGGGGSKEKLLRKYFNG--------MRGFEDNKRTVPSCPDSLHN
        L  FL+  L IWV  C   +A + R+FP+N     L+  ++       +K+ LLRK+FNG         +GFE+NKR VPSCPD LHN
Subjt:  LSTFLVMALFIWVVFCHQPRAVSARLFPEN-----LEETHV--GGGGGSKEKLLRKYFNG--------MRGFEDNKRTVPSCPDSLHN

A0A5A7VDX3 Putative Clavata3/esr-related 438.5e-1250.6Show/hide
Query:  GVTPNRQRRFLSTFLVMALFIWVVFCHQPRAVSARLFPENLEETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPDSLHN
        G TP+R+RR LS F ++  FIWVV  +Q  +  AR   E+  E    G  GSKEK       G R FE+NKRTVPSCPD LHN
Subjt:  GVTPNRQRRFLSTFLVMALFIWVVFCHQPRAVSARLFPENLEETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPDSLHN

A0A6A1W705 CLAVATA3/ESR (CLE)-related protein 432.6e-0543.37Show/hide
Query:  LVMALFIWVVFCHQPRAVSARLFPENLEE--THVGGGGG----SKEKLLRKYFNG--------MRGFEDNKRTVPSCPDSLHN
        ++  L IWV   +  +A + R+ P N E   T  G  G     +KE+LLRKYFNG          GFE++KR VPSCPD LHN
Subjt:  LVMALFIWVVFCHQPRAVSARLFPENLEE--THVGGGGG----SKEKLLRKYFNG--------MRGFEDNKRTVPSCPDSLHN

A0A7J8ZIU0 Uncharacterized protein5.3e-0637.5Show/hide
Query:  CGGVTPNRQRRFLSTFLVMALFIWVV---FCHQPRAVSARLFPENLEETHVGGGGGSKEKLLRKYFNGM--------RGFEDNKRTVPSCPDSLHN
        C G+     RR L++ +V+ L I V+    C   RA + R+FP N     +      +++L + YFNG         +GFED+KR VPSCPD LHN
Subjt:  CGGVTPNRQRRFLSTFLVMALFIWVV---FCHQPRAVSARLFPENLEETHVGGGGGSKEKLLRKYFNGM--------RGFEDNKRTVPSCPDSLHN

SwissProt top hitse value%identityAlignment
Q9LUA1 CLAVATA3/ESR (CLE)-related protein 279.7e-0533.71Show/hide
Query:  RRFLSTFLVMAL---FIWVVFCHQPRAVSARLFPENLEETHVGGGGGSKEKLLRKYFNG----------MRGFEDNKRTVPSCPDSLHN
        R  L+T L+M +   ++  +FC   R  + R+FPE         G   +E L++KYF             +G  ++KR VPSCPD LHN
Subjt:  RRFLSTFLVMAL---FIWVVFCHQPRAVSARLFPENLEETHVGGGGGSKEKLLRKYFNG----------MRGFEDNKRTVPSCPDSLHN

Arabidopsis top hitse value%identityAlignment
AT3G25905.1 CLAVATA3/ESR-RELATED 276.9e-0633.71Show/hide
Query:  RRFLSTFLVMAL---FIWVVFCHQPRAVSARLFPENLEETHVGGGGGSKEKLLRKYFNG----------MRGFEDNKRTVPSCPDSLHN
        R  L+T L+M +   ++  +FC   R  + R+FPE         G   +E L++KYF             +G  ++KR VPSCPD LHN
Subjt:  RRFLSTFLVMAL---FIWVVFCHQPRAVSARLFPENLEETHVGGGGGSKEKLLRKYFNG----------MRGFEDNKRTVPSCPDSLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGGCGGCGTCACTCCGAACCGACAGCGCCGATTTCTCTCTACTTTCTTGGTTATGGCTTTATTCATCTGGGTCGTCTTCTGCCACCAACCCCGCGCCGTCTCTGC
CAGACTCTTCCCGGAGAATCTAGAGGAAACCCACGTGGGCGGCGGTGGAGGAAGCAAGGAGAAGCTGCTCCGGAAGTATTTCAATGGAATGAGAGGGTTCGAAGACAACA
AACGAACAGTCCCCAGCTGCCCGGATTCTCTGCACAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCGGCGGCGTCACTCCGAACCGACAGCGCCGATTTCTCTCTACTTTCTTGGTTATGGCTTTATTCATCTGGGTCGTCTTCTGCCACCAACCCCGCGCCGTCTCTGC
CAGACTCTTCCCGGAGAATCTAGAGGAAACCCACGTGGGCGGCGGTGGAGGAAGCAAGGAGAAGCTGCTCCGGAAGTATTTCAATGGAATGAGAGGGTTCGAAGACAACA
AACGAACAGTCCCCAGCTGCCCGGATTCTCTGCACAACTAG
Protein sequenceShow/hide protein sequence
MCGGVTPNRQRRFLSTFLVMALFIWVVFCHQPRAVSARLFPENLEETHVGGGGGSKEKLLRKYFNGMRGFEDNKRTVPSCPDSLHN