; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G021550 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G021550
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRegulator of Vps4 activity in the MVB pathway protein, putative
Genome locationCmo_Chr04:15291264..15293137
RNA-Seq ExpressionCmoCh04G021550
SyntenyCmoCh04G021550
Gene Ontology termsGO:0015031 - protein transport (biological process)
InterPro domainsIPR005061 - Vacuolar protein sorting-associated protein Ist1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601794.1 IST1-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.6e-10492.11Show/hide
Query:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS
        MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQ E  GGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS
Subjt:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS

Query:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK
        R ESQDPDGPSSPGPGSATTSYHKQ QK+S+VEAKPK EIEYEYG+EEEGSK+  + EVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK
Subjt:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK

Query:  AEITEKPSFGLNLEKKPILVRTGRVRGY
         EITEKPSF LNLEKKPI VRT RVRGY
Subjt:  AEITEKPSFGLNLEKKPILVRTGRVRGY

KAG6601795.1 IST1-like protein, partial [Cucurbita argyrosperma subsp. sororia]5.2e-11196.93Show/hide
Query:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS
        MQKLS RHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQA FESAAQAAAAARAAMELS
Subjt:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS

Query:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK
        RPESQDPDGPSSPGPGSATTSYHKQ QKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSM   SSNRELFVKENREMDEQRATNIEIGEEMEANLEK
Subjt:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK

Query:  AEITEKPSFGLNLEKKPILVRTGRVRGY
         EITEKPSFGLNLEKKPILVRTGRVRGY
Subjt:  AEITEKPSFGLNLEKKPILVRTGRVRGY

KAG7032509.1 IST1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-11398.68Show/hide
Query:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS
        MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS
Subjt:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS

Query:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK
        RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSM   SSNRELFVKENREMDEQRATNIEIGEEMEANLEK
Subjt:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK

Query:  AEITEKPSFGLNLEKKPILVRTGRVRGY
        AEITEKPSFGLNLEKKPILVRTGRVRGY
Subjt:  AEITEKPSFGLNLEKKPILVRTGRVRGY

XP_022921602.1 uncharacterized protein LOC111429814 [Cucurbita moschata]3.6e-10492.11Show/hide
Query:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS
        MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQ E  GGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS
Subjt:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS

Query:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK
        R ESQDPDGPSSPGPGSATTSYHKQ QK+S+VEAKPK EIEYEYG+EEEGSK+  + EVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK
Subjt:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK

Query:  AEITEKPSFGLNLEKKPILVRTGRVRGY
         EITEKPSF LNLEKKPI VRT RVRGY
Subjt:  AEITEKPSFGLNLEKKPILVRTGRVRGY

XP_022921615.1 uncharacterized protein LOC111429823 [Cucurbita moschata]2.4e-116100Show/hide
Query:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS
        MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS
Subjt:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS

Query:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK
        RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK
Subjt:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK

Query:  AEITEKPSFGLNLEKKPILVRTGRVRGY
        AEITEKPSFGLNLEKKPILVRTGRVRGY
Subjt:  AEITEKPSFGLNLEKKPILVRTGRVRGY

TrEMBL top hitse value%identityAlignment
A0A0A0KAU0 Uncharacterized protein7.9e-4154.51Show/hide
Query:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNE---ARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAM
        MQKLSTR P LE+RMD LK+IASENGI LQ+D+ P S +    RN RQ++ E     G++ +FS EV SGSK  YKDVADAAQAAFESAAQAAAAARAAM
Subjt:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNE---ARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAM

Query:  ELSRPESQDPDGPSSPG-PGSATTSYHKQVQKESDVEAKPKLEI-EYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEME
        ELSR      +GPSSP  PGS TTS +KQ +++ +VE+K K E+ EY  GR+ EG                    E   +E   MDE+R +N   G +ME
Subjt:  ELSRPESQDPDGPSSPG-PGSATTSYHKQVQKESDVEAKPKLEI-EYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEME

Query:  ANLEKAEITEKPSFGLNLEKKPILVRTGRVRGY
          +EK E++EK SF LNLEKKPI VRT RV GY
Subjt:  ANLEKAEITEKPSFGLNLEKKPILVRTGRVRGY

A0A6J1CFG6 uncharacterized protein LOC1110103251.7e-5965.69Show/hide
Query:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNE---ARNSRQN-QPETDGGVGENLKFSTEVPSGS---KQKYKDVADAAQAAFESAAQAAAAA
        MQKLSTR PNLESRM++L+ IASEN I LQLDE PLSNE   ARN RQN Q E    VG+NL+FS +VPSGS   KQKYKDVADAAQAAFESAAQAAAAA
Subjt:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNE---ARNSRQN-QPETDGGVGENLKFSTEVPSGS---KQKYKDVADAAQAAFESAAQAAAAA

Query:  RAAMELSRPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEE--GSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIG
        RAAMELSR +SQDPD PS+P PGS +T+  +Q QK+S+VE+KPK EIEY+  REEE  GSK+T   EVKNSM    S      +E+ EM+EQRA N+E G
Subjt:  RAAMELSRPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEE--GSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIG

Query:  EEMEANL--EKAEITEKPSFGLNLEKKPILVRTGRVRGY
         +ME     E  E T+KPSFGLNLEKKP+ VRT RVRG+
Subjt:  EEMEANL--EKAEITEKPSFGLNLEKKPILVRTGRVRGY

A0A6J1E0Z0 uncharacterized protein LOC1114298141.7e-10492.11Show/hide
Query:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS
        MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQ E  GGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS
Subjt:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS

Query:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK
        R ESQDPDGPSSPGPGSATTSYHKQ QK+S+VEAKPK EIEYEYG+EEEGSK+  + EVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK
Subjt:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK

Query:  AEITEKPSFGLNLEKKPILVRTGRVRGY
         EITEKPSF LNLEKKPI VRT RVRGY
Subjt:  AEITEKPSFGLNLEKKPILVRTGRVRGY

A0A6J1E4E5 uncharacterized protein LOC1114298231.2e-116100Show/hide
Query:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS
        MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS
Subjt:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS

Query:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK
        RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK
Subjt:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK

Query:  AEITEKPSFGLNLEKKPILVRTGRVRGY
        AEITEKPSFGLNLEKKPILVRTGRVRGY
Subjt:  AEITEKPSFGLNLEKKPILVRTGRVRGY

A0A6J1I2V3 uncharacterized protein LOC1114704471.9e-10391.67Show/hide
Query:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS
        MQKLSTR PNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQ E  GGVGENLK STEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS
Subjt:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELS

Query:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK
        R ESQDPDGPSSPGPGSAT+SY KQ QK+S+VEAKPKLEIEYEYGREEEGSK+ PKPEVKNSMCGCSSNRELFVKENREMDEQRA+NIEIGEEMEANLEK
Subjt:  RPESQDPDGPSSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK

Query:  AEITEKPSFGLNLEKKPILVRTGRVRGY
          ITEKPSF LNLEKKPI VRT RVRGY
Subjt:  AEITEKPSFGLNLEKKPILVRTGRVRGY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13340.1 Regulator of Vps4 activity in the MVB pathway protein4.6e-1747.86Show/hide
Query:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPE-------TDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAA
        +QKLSTR P  E RM  LK IA+EN I L+LD+   S E   + Q   +       +  G GE    S  V  G K+KYKDVADAAQAAFESAA AA AA
Subjt:  MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPE-------TDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAA

Query:  RAAMELSRPESQDPDGPSSPGPGSATTSYHKQVQKESDVE
        +AA+ELS+     P G  SPG      S+H    KES+ E
Subjt:  RAAMELSRPESQDPDGPSSPGPGSATTSYHKQVQKESDVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAACTTTCCACGAGGCACCCAAATTTGGAGAGTAGAATGGATTTGCTCAAAACCATTGCTTCCGAGAATGGAATTACTCTGCAACTCGACGAAACCCCTCTTTC
CAATGAGGCCAGAAACTCTAGACAAAACCAACCGGAGACAGATGGCGGAGTGGGAGAGAATTTGAAATTCTCCACTGAAGTCCCATCTGGATCGAAACAAAAGTACAAAG
ATGTGGCGGATGCAGCACAAGCCGCTTTTGAGTCGGCAGCTCAAGCAGCAGCTGCGGCCAGAGCTGCCATGGAGCTCTCCCGCCCTGAATCACAAGACCCTGATGGTCCA
AGCAGCCCGGGCCCTGGGTCTGCAACGACTTCATATCACAAACAAGTGCAAAAGGAATCCGATGTCGAAGCCAAACCCAAATTGGAAATTGAATATGAATATGGGAGAGA
AGAAGAAGGCAGCAAAGTCACACCAAAACCAGAAGTAAAGAATTCAATGTGTGGTTGTTCTTCGAACAGAGAGTTGTTTGTTAAAGAAAACAGAGAGATGGATGAACAGA
GAGCTACAAATATTGAAATTGGGGAGGAGATGGAAGCGAATTTAGAGAAGGCAGAGATAACTGAGAAACCAAGCTTTGGTTTAAATTTGGAGAAGAAGCCAATTTTAGTG
AGAACAGGAAGAGTGCGTGGATACTGA
mRNA sequenceShow/hide mRNA sequence
TATATAAACCCATTTCCCCTTCACTCTGAAACAACATACATATATAAACCCATTTCCCCTTCACTCTGAAACAACATACATATATAAACCCATTTCCCCTTCAAACCTCC
CAAAACCTTCAACCCCATTTCACCATGGGAAGAACACTCGACGCTCTTCTCGGAAGGAATTTCAGAGCCTCCAAATTCCGCCCTCTTCTCAACCTCACCCTCTCTCGCCT
TGCCATTCTCACCAACCAACGCCGTCTGAGGCGCTCTCAAGCTCAATCCGATGTTCTCCAACTCCTCCAACTCCACCACCAACAACGCGCCCTTCTTCGAGTGGAGCAAG
TGATCAAGGACCAGAATGCCTTGGATGCGTATGTTTTGATAGAAGGGTACCTCAATCTCTTGATTGAAAGAGCCTCCCTCCTCGAACAAGAAAGGTTTTCCTAAGAATGC
CCTGAGGAATTGAAAGAGGCGCTTGCAGGGTTGCTATTTGCTGCTTCAAGATGTGGGGATTTCCCTGAACTTCACGAGATTAAGTCCGCTTTGACCTCTCGTTTCGGAAA
GGAATTCACTGCTCGTGCAGTTGAATTACGCAACAACTGTGGAGTCAATCATTTGTTAATGCAGAAACTTTCCACGAGGCACCCAAATTTGGAGAGTAGAATGGATTTGC
TCAAAACCATTGCTTCCGAGAATGGAATTACTCTGCAACTCGACGAAACCCCTCTTTCCAATGAGGCCAGAAACTCTAGACAAAACCAACCGGAGACAGATGGCGGAGTG
GGAGAGAATTTGAAATTCTCCACTGAAGTCCCATCTGGATCGAAACAAAAGTACAAAGATGTGGCGGATGCAGCACAAGCCGCTTTTGAGTCGGCAGCTCAAGCAGCAGC
TGCGGCCAGAGCTGCCATGGAGCTCTCCCGCCCTGAATCACAAGACCCTGATGGTCCAAGCAGCCCGGGCCCTGGGTCTGCAACGACTTCATATCACAAACAAGTGCAAA
AGGAATCCGATGTCGAAGCCAAACCCAAATTGGAAATTGAATATGAATATGGGAGAGAAGAAGAAGGCAGCAAAGTCACACCAAAACCAGAAGTAAAGAATTCAATGTGT
GGTTGTTCTTCGAACAGAGAGTTGTTTGTTAAAGAAAACAGAGAGATGGATGAACAGAGAGCTACAAATATTGAAATTGGGGAGGAGATGGAAGCGAATTTAGAGAAGGC
AGAGATAACTGAGAAACCAAGCTTTGGTTTAAATTTGGAGAAGAAGCCAATTTTAGTGAGAACAGGAAGAGTGCGTGGATACTGATGAACACATATGTATGGAATTTTGT
GTCCCATAATTTGGTTTTGGTTTTTCTCTAAATATTTTTTAATATATATTTGTTGGTTTGGATAGACAGAGGAGGTGTGTAATTATGTGGTTTTATTTGGGAATTTTGGC
AGTTCGGGAAACTCAACATTTTTGTTTGTTTTACATCGTATATTCACATGATTTTTTTTATAATTTTCCTTTAAATCTTTCTTTTTTTGGGAATCCCAATTATTAAATTA
AGTAAACTGT
Protein sequenceShow/hide protein sequence
MQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELSRPESQDPDGP
SSPGPGSATTSYHKQVQKESDVEAKPKLEIEYEYGREEEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEKAEITEKPSFGLNLEKKPILV
RTGRVRGY