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CmoCh04G021870 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G021870
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAcyl-[acyl-carrier-protein] hydrolase
Genome locationCmo_Chr04:16151073..16151889
RNA-Seq ExpressionCmoCh04G021870
SyntenyCmoCh04G021870
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0000036 - acyl carrier activity (molecular function)
GO:0016297 - acyl-[acyl-carrier-protein] hydrolase activity (molecular function)
InterPro domainsIPR002864 - Acyl-ACP thioesterase
IPR045023 - Acyl-[acyl-carrier-protein] hydrolase FATA/B


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601831.1 Dodecanoyl-[acyl-carrier-protein] hydrolase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.7e-5799.14Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
        ETIPDHVLES QLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG

Query:  RTTWKKKLTTIPFSTQ
        RTTWKKKLTTIPFSTQ
Subjt:  RTTWKKKLTTIPFSTQ

KAG7032537.1 Palmitoyl-acyl carrier protein thioesterase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-5799.14Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
        ETIPDHVLES QLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG

Query:  RTTWKKKLTTIPFSTQ
        RTTWKKKLTTIPFSTQ
Subjt:  RTTWKKKLTTIPFSTQ

XP_022152342.1 palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Momordica charantia]3.1e-4885.34Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
        ETIPDHVLES QLSSI+LEYRREC SSDIVQSLCEPE DGILRD+D IEDNEI++L+GFSLASEI K GGLLGS+++G LRYTHLLQIEGEAKNEEIVRG
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG

Query:  RTTWKKKLTTIPFSTQ
        RTTWKKKLT IPF TQ
Subjt:  RTTWKKKLTTIPFSTQ

XP_022959400.1 palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita moschata]7.3e-58100Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
        ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG

Query:  RTTWKKKLTTIPFSTQ
        RTTWKKKLTTIPFSTQ
Subjt:  RTTWKKKLTTIPFSTQ

XP_023520826.1 palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita pepo subsp. pepo]1.8e-5698.28Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
        ETIPDHVLES QLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRY HLLQIEGEAKNEEIVRG
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG

Query:  RTTWKKKLTTIPFSTQ
        RTTWKKKLTTIPFSTQ
Subjt:  RTTWKKKLTTIPFSTQ

TrEMBL top hitse value%identityAlignment
A0A1S3CSW2 Acyl-[acyl-carrier-protein] hydrolase2.5e-4887.07Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
        ETIPDHVLES QLSSIILEYRREC SSDIVQSLCEP+ DGILRD++MIED+EI++L+GFSLASEILK GGLLGS+++G LRYTHLLQIEGEAKNEEIVRG
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG

Query:  RTTWKKKLTTIPFSTQ
        RTTWKKKLTTIPFSTQ
Subjt:  RTTWKKKLTTIPFSTQ

A0A5D3E585 Acyl-[acyl-carrier-protein] hydrolase2.5e-4887.07Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
        ETIPDHVLES QLSSIILEYRREC SSDIVQSLCEP+ DGILRD++MIED+EI++L+GFSLASEILK GGLLGS+++G LRYTHLLQIEGEAKNEEIVRG
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG

Query:  RTTWKKKLTTIPFSTQ
        RTTWKKKLTTIPFSTQ
Subjt:  RTTWKKKLTTIPFSTQ

A0A6J1DFY4 Acyl-[acyl-carrier-protein] hydrolase1.5e-4885.34Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
        ETIPDHVLES QLSSI+LEYRREC SSDIVQSLCEPE DGILRD+D IEDNEI++L+GFSLASEI K GGLLGS+++G LRYTHLLQIEGEAKNEEIVRG
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG

Query:  RTTWKKKLTTIPFSTQ
        RTTWKKKLT IPF TQ
Subjt:  RTTWKKKLTTIPFSTQ

A0A6J1FHN8 Acyl-[acyl-carrier-protein] hydrolase1.6e-4785.47Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
        ETIPDHVLES QLSSIILEYRREC SSDIVQSLCEPE +GILRD+DMIED+EI++L+GFSLASEILK GGLLGS++ G LRYTHLLQIEGEAKNEEI+RG
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG

Query:  RTTWKKKL-TTIPFSTQ
        RTTWKKK+ TTIPFSTQ
Subjt:  RTTWKKKL-TTIPFSTQ

A0A6J1H665 Acyl-[acyl-carrier-protein] hydrolase3.5e-58100Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
        ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG

Query:  RTTWKKKLTTIPFSTQ
        RTTWKKKLTTIPFSTQ
Subjt:  RTTWKKKLTTIPFSTQ

SwissProt top hitse value%identityAlignment
Q39473 Dodecanoyl-[acyl-carrier-protein] hydrolase, chloroplastic2.5e-0529.36Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
        ET+PD + ES  +SS  +EYRREC    ++QSL                                     + G  ++  L   HLLQ+EG     E++R 
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG

Query:  RTTWKKKLT
        +T W+ KLT
Subjt:  RTTWKKKLT

Q41635 Dodecanoyl-[acyl-carrier-protein] hydrolase, chloroplastic1.5e-0531.19Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
        ET+PD + ES  +SS  LEYRREC              D +LR +  +                        G  ++  L   HLLQ+EG     E++R 
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG

Query:  RTTWKKKLT
        RT W+ KLT
Subjt:  RTTWKKKLT

Q42561 Oleoyl-acyl carrier protein thioesterase 1, chloroplastic9.7e-0531.25Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGA-----LRYTHLLQIEGEAKNE
        E+IP  ++++ +L  I L+YRREC   D+V SL                          +  SEI   GG  GS   G       ++ HLL++ G+   +
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGA-----LRYTHLLQIEGEAKNE

Query:  EIVRGRTTWKKK
        EI RG T W+KK
Subjt:  EIVRGRTTWKKK

Q42712 Oleoyl-acyl carrier protein thioesterase, chloroplastic (Fragment)4.6e-0733.64Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQG---ALRYTHLLQIEGEAKNEEI
        E+IP  VL + +L +I L+YRREC   D+V SL  PE D         ED  +         ++I+   G   +  +    +L++ H L++ G+    EI
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQG---ALRYTHLLQIEGEAKNEEI

Query:  VRGRTTWKKK
         RGRT W+KK
Subjt:  VRGRTTWKKK

Q9SQI3 Palmitoyl-acyl carrier protein thioesterase, chloroplastic2.2e-0431.78Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
        E+ P  +LES +LS++ LEYRREC    ++QSL            D   +N +N+                      G     HLL+++  A   EIVRG
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG

Query:  RTTWKKK
        RT W+ K
Subjt:  RTTWKKK

Arabidopsis top hitse value%identityAlignment
AT1G08510.1 fatty acyl-ACP thioesterases B8.4e-0428.7Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG
        E+ P  ++E  +L S+ LEYRREC    ++QSL       I                           G L      G +   HLL+++  A   E+VRG
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRYTHLLQIEGEAKNEEIVRG

Query:  RTTWKKKLTTIPFST
        RT W  K  T  + T
Subjt:  RTTWKKKLTTIPFST

AT3G25110.1 fatA acyl-ACP thioesterase6.9e-0631.25Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGA-----LRYTHLLQIEGEAKNE
        E+IP  ++++ +L  I L+YRREC   D+V SL                          +  SEI   GG  GS   G       ++ HLL++ G+   +
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGA-----LRYTHLLQIEGEAKNE

Query:  EIVRGRTTWKKK
        EI RG T W+KK
Subjt:  EIVRGRTTWKKK

AT4G13050.1 Acyl-ACP thioesterase9.0e-0632.73Show/hide
Query:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRY--THLLQIEGEAKN-EEI
        E+IP  ++++ +L  I L+YRREC   DIV SL   E             NE+           + K  G  GS       +  +H L I   ++N +EI
Subjt:  ETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGALRY--THLLQIEGEAKN-EEI

Query:  VRGRTTWKKK
         RGRT W+KK
Subjt:  VRGRTTWKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTGGAGGTATCATTCATTACTCTAGCAAGACTTTCCCCTTTTATAACTCGATTCGGGGTGGTTTGAAGAAACCGAGCTTATCCCCAGAGACGATACCTGACCA
TGTTTTGGAGTCCCTTCAACTGTCTAGTATCATATTAGAGTATAGAAGGGAATGCGCAAGCTCTGATATAGTTCAATCACTATGTGAGCCAGAGAATGATGGAATCCTCA
GGGATATGGACATGATAGAAGATAATGAAATCAATATCCTACATGGGTTTTCCTTGGCATCTGAGATTCTCAAATGTGGTGGGCTGTTGGGATCTTATAACCAAGGAGCA
TTGAGGTATACACATCTACTACAAATTGAAGGGGAAGCTAAGAATGAAGAGATAGTGAGGGGAAGAACCACATGGAAGAAGAAGCTTACCACTATACCATTTTCCACACA
GTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTGGAGGTATCATTCATTACTCTAGCAAGACTTTCCCCTTTTATAACTCGATTCGGGGTGGTTTGAAGAAACCGAGCTTATCCCCAGAGACGATACCTGACCA
TGTTTTGGAGTCCCTTCAACTGTCTAGTATCATATTAGAGTATAGAAGGGAATGCGCAAGCTCTGATATAGTTCAATCACTATGTGAGCCAGAGAATGATGGAATCCTCA
GGGATATGGACATGATAGAAGATAATGAAATCAATATCCTACATGGGTTTTCCTTGGCATCTGAGATTCTCAAATGTGGTGGGCTGTTGGGATCTTATAACCAAGGAGCA
TTGAGGTATACACATCTACTACAAATTGAAGGGGAAGCTAAGAATGAAGAGATAGTGAGGGGAAGAACCACATGGAAGAAGAAGCTTACCACTATACCATTTTCCACACA
GTAAATATCATGTCTAGCAGTCTCGTGCCTCTTTACGAAGAAGACAACACACCAACAACGCAACATTCCTCCAAGCAAAAAGGATTATTCATAGTCTTGTTGCTTTGCTT
CACAAGGGAGTTCATCAGATGGAGCTGCTCCTGCAAATGTAATAGAAATGACAGAGCATCCCTTCAAAGAGGTCAAGAAACTGTGTAAACATAAGAGAAACAATGTAAGT
TCTTTCCGTAAGCTTATCCTTCTTATATATGTATATGTTTTTTTCAAGAGATTCTAATGCCTA
Protein sequenceShow/hide protein sequence
MDAGGIIHYSSKTFPFYNSIRGGLKKPSLSPETIPDHVLESLQLSSIILEYRRECASSDIVQSLCEPENDGILRDMDMIEDNEINILHGFSLASEILKCGGLLGSYNQGA
LRYTHLLQIEGEAKNEEIVRGRTTWKKKLTTIPFSTQ