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CmoCh04G021930 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G021930
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionleucine-rich repeat extensin-like protein 1
Genome locationCmo_Chr04:16247802..16248319
RNA-Seq ExpressionCmoCh04G021930
SyntenyCmoCh04G021930
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601836.1 hypothetical protein SDJN03_07069, partial [Cucurbita argyrosperma subsp. sororia]2.9e-7097.14Show/hide
Query:  MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
        MGSHLNKVLSTILL LIVSVLPPATSSDDTCPYPCYPPPTGT YP TPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
Subjt:  MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP

Query:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLI
        YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNL+
Subjt:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLI

KAG7032542.1 hypothetical protein SDJN02_06591, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-6996.43Show/hide
Query:  MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
        MGSHLNKVLSTILL LIVSVLPPATSSDDTCPYPCYPPPT T YP TPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
Subjt:  MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP

Query:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLI
        YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNL+
Subjt:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLI

XP_022961992.1 leucine-rich repeat extensin-like protein 1 [Cucurbita moschata]7.0e-7299.29Show/hide
Query:  MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
        MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
Subjt:  MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP

Query:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLI
        YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNL+
Subjt:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLI

XP_022989991.1 extensin-2-like [Cucurbita maxima]5.2e-6793.57Show/hide
Query:  MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
        MGSHLNKVLS ILLALIVSVLPPAT SDDTCPYPCYPPPTGT YP TPAT TPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
Subjt:  MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP

Query:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLI
        YFPYYYKKPPHKPEDESGGTAVSEIGA VFICVSV LN +
Subjt:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLI

XP_023520931.1 extensin-1-like [Cucurbita pepo subsp. pepo]1.7e-7097.14Show/hide
Query:  MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
        MGSHLNKVLSTILLALI+SVLPPATSSDDTCPYPCYPPPTGT YP TPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
Subjt:  MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP

Query:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLI
        YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNL+
Subjt:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLI

TrEMBL top hitse value%identityAlignment
A0A0A0KUZ1 Uncharacterized protein7.1e-4671.01Show/hide
Query:  LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKK
        +  +LLAL++++ PPAT SDDTCPYPCYPPPTG S  TTPATL+PPSQT   SYSPPAYYSPPAAYYPYNPP  DG+SFDG+TPPPPDPILPYFPYYYKK
Subjt:  LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKK

Query:  PPHKPEDESGGTAV----SEIGAFVFICVSVLLNLISY
        PPHKP+DESGG+AV    SE+G      V + L+L S+
Subjt:  PPHKPEDESGGTAV----SEIGAFVFICVSVLLNLISY

A0A1S3CU56 proline-rich receptor-like protein kinase PERK82.1e-4568.31Show/hide
Query:  LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKK
        +  +LLAL++++LPPAT SDDTCPYPCYPPPTG    TTPAT +PPSQ    SYSPPAYYSPPAAYYPYNPPP DG+SFDG+TPPPPDPILPYFPYYYKK
Subjt:  LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKK

Query:  PPHKPEDESGGTAV----SEIGAFVFICVSVLLNLISYEFLF
        PPHKP+DESGG+AV    SE+G      V + L+L S+  ++
Subjt:  PPHKPEDESGGTAV----SEIGAFVFICVSVLLNLISYEFLF

A0A5D3E4I6 Proline-rich receptor-like protein kinase PERK82.1e-4568.31Show/hide
Query:  LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKK
        +  +LLAL++++LPPAT SDDTCPYPCYPPPTG    TTPAT +PPSQ    SYSPPAYYSPPAAYYPYNPPP DG+SFDG+TPPPPDPILPYFPYYYKK
Subjt:  LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKK

Query:  PPHKPEDESGGTAV----SEIGAFVFICVSVLLNLISYEFLF
        PPHKP+DESGG+AV    SE+G      V + L+L S+  ++
Subjt:  PPHKPEDESGGTAV----SEIGAFVFICVSVLLNLISYEFLF

A0A6J1HBK1 leucine-rich repeat extensin-like protein 13.4e-7299.29Show/hide
Query:  MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
        MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
Subjt:  MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP

Query:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLI
        YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNL+
Subjt:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLI

A0A6J1JLQ1 extensin-2-like2.5e-6793.57Show/hide
Query:  MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
        MGSHLNKVLS ILLALIVSVLPPAT SDDTCPYPCYPPPTGT YP TPAT TPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP
Subjt:  MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILP

Query:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLI
        YFPYYYKKPPHKPEDESGGTAVSEIGA VFICVSV LN +
Subjt:  YFPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23050.1 hydroxyproline-rich glycoprotein family protein4.6e-1338.81Show/hide
Query:  TILLALIVSVLPPATSSDDTCPYPCYP-PPTGTSYPTTPATLTPPSQTDSGSYSPPA----YYSPPAAYYP-YNPPPYDGDSFDGIT---PPPPDPILPY
        T++    +   P    SD  CPYPCYP PP G    T   T  PP      +Y  PA     Y PP    P Y  PPY G    G +   PPPP+ ILPY
Subjt:  TILLALIVSVLPPATSSDDTCPYPCYP-PPTGTSYPTTPATLTPPSQTDSGSYSPPA----YYSPPAAYYP-YNPPPYDGDSFDGIT---PPPPDPILPY

Query:  FPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSV
        FPYY++KPPH+ +  S  + V+  G +    V+V
Subjt:  FPYYYKKPPHKPEDESGGTAVSEIGAFVFICVSV

AT1G70985.1 hydroxyproline-rich glycoprotein family protein1.9e-1137.41Show/hide
Query:  LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAA----YYPYNPPPYDGDSFDGIT-PPPPDPILPYFP
        L ++L    + + P  T S   CPYPC P P   +  T PA   P          P  YY PP++     YP +PP Y G+   G   PPPPDPILPYFP
Subjt:  LSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAA----YYPYNPPPYDGDSFDGIT-PPPPDPILPYFP

Query:  YYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLISY
        +YY+KPPH+  D+S  +  S +       +  +L L S+
Subjt:  YYYKKPPHKPEDESGGTAVSEIGAFVFICVSVLLNLISY

AT3G06750.1 hydroxyproline-rich glycoprotein family protein3.4e-0840.34Show/hide
Query:  LLALIVSVLPPATSSDDT--------CPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPP---AAYYPYNPPPYDGDSFDGI----------T
        LL L++S+    TS D+T        C  PC P P+  S P  P    P S    GSY    YYSPP   ++     PPPY GD + G           T
Subjt:  LLALIVSVLPPATSSDDT--------CPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPP---AAYYPYNPPPYDGDSFDGI----------T

Query:  PPPPDPILPYFPYYYKKPP
        PPPP+PI+PYFP+YY  PP
Subjt:  PPPPDPILPYFPYYYKKPP

AT4G16140.1 proline-rich family protein1.2e-0540.78Show/hide
Query:  TSSDDTC-PYPCYPPPTGTSYPTTPA---TLTPPSQTDSGSYSPPAYYSPPA----AYYP---------YNPPPYDGDSFDGITPPPPDPILPYFPYYYK
        TS D+ C P P  PPP     P  P+   T  PP  + SG    P YY PPA    +Y P         Y PPP  G ++     PPP+PI+PYFP+YY 
Subjt:  TSSDDTC-PYPCYPPPTGTSYPTTPA---TLTPPSQTDSGSYSPPAYYSPPA----AYYP---------YNPPPYDGDSFDGITPPPPDPILPYFPYYYK

Query:  KPP
         PP
Subjt:  KPP

AT5G49280.1 hydroxyproline-rich glycoprotein family protein1.9e-1136.54Show/hide
Query:  LSTILLALIVSVLPPATSSDD--------TCPYPC-----YPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPP------AAYYP----------YNP
        LST+++ L+VSV P  TS D+        +C  PC      PPP     P+TP T  PP  +   S    +YY PP       + YP          Y P
Subjt:  LSTILLALIVSVLPPATSSDD--------TCPYPC-----YPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPP------AAYYP----------YNP

Query:  PPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAVSEIGAF--VFICV
        PPY G+     TPPPP+PI+PYFP+YY  PP     +   ++ S I A   VF+C+
Subjt:  PPYDGDSFDGITPPPPDPILPYFPYYYKKPPHKPEDESGGTAVSEIGAF--VFICV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCACACCTAAACAAGGTTCTCTCCACAATCCTCCTGGCCTTGATCGTTTCCGTCCTTCCGCCGGCGACTAGCTCCGACGACACCTGCCCATATCCCTGCTACCC
TCCGCCAACCGGCACCAGCTATCCCACCACTCCGGCCACTCTAACTCCGCCGTCGCAAACAGACTCAGGCTCCTACTCTCCTCCAGCGTACTACTCTCCGCCGGCTGCAT
ATTACCCATATAACCCGCCGCCGTACGATGGCGACAGCTTCGACGGCATCACTCCACCGCCACCGGATCCGATTCTTCCGTACTTCCCTTACTATTACAAGAAGCCTCCT
CACAAACCGGAGGATGAATCCGGTGGTACCGCCGTGTCGGAGATCGGAGCTTTTGTATTTATTTGTGTCTCCGTCTTATTGAATTTGATCAGCTATGAATTTTTATTCAC
AAATTCAAATCATTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCACACCTAAACAAGGTTCTCTCCACAATCCTCCTGGCCTTGATCGTTTCCGTCCTTCCGCCGGCGACTAGCTCCGACGACACCTGCCCATATCCCTGCTACCC
TCCGCCAACCGGCACCAGCTATCCCACCACTCCGGCCACTCTAACTCCGCCGTCGCAAACAGACTCAGGCTCCTACTCTCCTCCAGCGTACTACTCTCCGCCGGCTGCAT
ATTACCCATATAACCCGCCGCCGTACGATGGCGACAGCTTCGACGGCATCACTCCACCGCCACCGGATCCGATTCTTCCGTACTTCCCTTACTATTACAAGAAGCCTCCT
CACAAACCGGAGGATGAATCCGGTGGTACCGCCGTGTCGGAGATCGGAGCTTTTGTATTTATTTGTGTCTCCGTCTTATTGAATTTGATCAGCTATGAATTTTTATTCAC
AAATTCAAATCATTTATAA
Protein sequenceShow/hide protein sequence
MGSHLNKVLSTILLALIVSVLPPATSSDDTCPYPCYPPPTGTSYPTTPATLTPPSQTDSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGITPPPPDPILPYFPYYYKKPP
HKPEDESGGTAVSEIGAFVFICVSVLLNLISYEFLFTNSNHL