; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G022220 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G022220
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSenescence-associated protein
Genome locationCmo_Chr04:16608491..16610121
RNA-Seq ExpressionCmoCh04G022220
SyntenyCmoCh04G022220
Gene Ontology termsNA
InterPro domainsIPR040358 - Uncharacterized protein At4g22758-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032577.1 hypothetical protein SDJN02_06626, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-72100Show/hide
Query:  MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQ
        MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQ
Subjt:  MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQ

Query:  AEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
        AEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
Subjt:  AEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH

XP_022959923.1 uncharacterized protein At4g22758-like [Cucurbita moschata]9.1e-74100Show/hide
Query:  MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK
        MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK
Subjt:  MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK

Query:  PQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
        PQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
Subjt:  PQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH

XP_022990881.1 uncharacterized protein At4g22758 [Cucurbita maxima]1.7e-7298.58Show/hide
Query:  MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK
        MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLH FQLYCPSAGPDALSPWDTIGSHGARNFTLCKK
Subjt:  MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK

Query:  PQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
        PQAEK GEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
Subjt:  PQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH

XP_023521148.1 uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo]2.6e-7399.29Show/hide
Query:  MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK
        MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK
Subjt:  MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK

Query:  PQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
        PQAEK GEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
Subjt:  PQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH

XP_023540757.1 uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo]2.3e-6985.37Show/hide
Query:  MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDA--------------------
        MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDA                    
Subjt:  MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDA--------------------

Query:  ---LSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
           LSPWDTIGSHGARNFTLCKKPQAEK GEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
Subjt:  ---LSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH

TrEMBL top hitse value%identityAlignment
A0A0A0KUW8 Uncharacterized protein7.8e-6387.77Show/hide
Query:  MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQ
        MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIV+EEQLVA VIDTALKSYAREGRLPILGSDL DFQLYCP+ GPDALSPWDTIGSHGARNF LCKKPQ
Subjt:  MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQ

Query:  AEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
         EK  E+GK  S PAI RK++GSWKSWINKSLN+KIYSH
Subjt:  AEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH

A0A1S4DSB9 uncharacterized protein At4g22758-like3.9e-6286.33Show/hide
Query:  MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQ
        MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIV+EEQLVA VIDTALKSYAREGRLPILGSDL DFQLYCP+ GPDALSPWDTIGSHGARNF LCKKPQ
Subjt:  MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQ

Query:  AEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
         EK  E+GK+   P I RK++GSWKSWINKSLN+KIYSH
Subjt:  AEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH

A0A6J1FHE7 uncharacterized protein At4g22758-like3.0e-6287.05Show/hide
Query:  MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQ
        MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIV+EEQLVA VIDTALKSYAREGRLPILGSDL DFQLYCP AGPDALSPWDTIGSHG+RNF LCKKPQ
Subjt:  MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQ

Query:  AEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
         EK GE G +   P+I RK +GSWKSWINKSLNMKIYSH
Subjt:  AEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH

A0A6J1H7B9 uncharacterized protein At4g22758-like4.4e-74100Show/hide
Query:  MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK
        MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK
Subjt:  MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK

Query:  PQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
        PQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
Subjt:  PQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH

A0A6J1JP66 uncharacterized protein At4g227588.3e-7398.58Show/hide
Query:  MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK
        MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLH FQLYCPSAGPDALSPWDTIGSHGARNFTLCKK
Subjt:  MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK

Query:  PQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
        PQAEK GEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
Subjt:  PQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH

SwissProt top hitse value%identityAlignment
Q56XJ7 Uncharacterized protein At4g227581.2e-0433.33Show/hide
Query:  NVKGN-----RLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK
        N +GN     +++IS+ V GS GP+R +V     V + I   +  Y +EGR P L  D   F+L+        L   + IG  G+R+F + KK
Subjt:  NVKGN-----RLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK

Arabidopsis top hitse value%identityAlignment
AT1G23150.1 unknown protein6.1e-4464.08Show/hide
Query:  MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQ
        MLLYK KKNQ VKGNR+LIS+  LGSAGPIRF+ +E  LVA VIDTALK YAREGRLPILGSD +DF  YCP  GP ALSPW+ IGS G RNF LCKK  
Subjt:  MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQ

Query:  AEKAGEDGKAASRPAIH---RKASGSWKSWINKSLNMKIYSH
         EK  E+ K  S   I+   + A GS+K+WINKSL +K+ +H
Subjt:  AEKAGEDGKAASRPAIH---RKASGSWKSWINKSLNMKIYSH

AT1G70780.1 unknown protein2.2e-4664.29Show/hide
Query:  MLLY-KQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKP
        MLLY KQKKNQN KGNR+LIS+ VLGSAGPIRF+  E+ LVA VIDTALK YAREGRLP+LGSD +DF LYCP  GP+ALS WD IGS GARNF LC+KP
Subjt:  MLLY-KQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKP

Query:  QAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
        + +K  E    +       +  GS K+WINKS N+K+ SH
Subjt:  QAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH

AT2G01554.1 unknown protein1.0e-0634.04Show/hide
Query:  LLYKQKKNQNVKG---NRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK
        +LY  K  +N K    NR L+SINVLGSAG   F  S++                   +P   SD     L  P  G         IGS G+RNF L  K
Subjt:  LLYKQKKNQNVKG---NRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKK

Query:  PQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH
         + +   ED    +     RK SG WK+W+NKS  + + SH
Subjt:  PQAEKAGEDGKAASRPAIHRKASGSWKSWINKSLNMKIYSH

AT2G27830.1 unknown protein1.4e-0833.72Show/hide
Query:  RLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL-GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQ
        +LL+++ V GS G ++ I+S E  V+D+ID A++ Y +E R P L  S+   F L+      +++   + + S G+RNF LC + +
Subjt:  RLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL-GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQ

AT5G37730.1 unknown protein4.3e-2144.35Show/hide
Query:  KNQNVKG------NRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQA
        +N+NVKG       +LL+S+NVLGS GPIRF+ +E+  V+  I+T LK+YAR+GR+P+LG D+ +F  Y  +AG + L P + IGS    NF +CKK   
Subjt:  KNQNVKG------NRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQA

Query:  EKAGEDGKAASRPAI
             +G   SR  I
Subjt:  EKAGEDGKAASRPAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGTTGCTGTACAAGCAGAAGAAGAACCAGAATGTTAAGGGCAATAGGCTGTTGATCAGCATCAATGTGCTCGGCAGCGCTGGCCCGATTCGATTTATTGTGAG
CGAGGAGCAACTTGTTGCTGATGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGCCGGCTCCCAATTCTTGGCTCTGATCTTCACGATTTCCAGCTTTATTGTC
CGAGTGCGGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCACGTTGTGCAAGAAACCACAGGCAGAGAAAGCAGGAGAAGATGGA
AAAGCAGCATCACGGCCAGCCATCCATCGCAAAGCCTCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATATGAAAATCTATTCCCATTGA
mRNA sequenceShow/hide mRNA sequence
ACCCTAAGCAAATCCATTTAAATACCACCTGCCATCCTCGTCGGTACCCACAATTCTCAGTTTTCACCATTGTTTTCTTCTTCTCAATTCATTGTATTCCCTTCTTTCTC
TCCTCTCTCTCTGCAAATCAATTCCGTTTCTCGCTGTGATTGTTTTCTTTCATCCGCCGGAATAGGTTCGAGAATTTTTCAAGGAGTTGTGAATGGTTGAAGAAAATTCC
AGTAGTAGTAATTACATGCGCTCCCTTTTGGATTCAAGGGCGAGCGCTCGTCTTCCTCTTTCTGCTTTTTCTTCTTTTGCTTTTGGTTCTTGCAAGGAAGGCTGGTACTA
CCGCTGCCTTGGAGTTGACCCTTGAGATCTCTCTCTCTAATCCATATACTCATTTCAAGGAATTTTCATTTTCTTTAAGTTTTTGCGATTTTTCTCTTTTGATTTTTTGA
TACCGGCGCTAGCTTCGGTGAGTTTCTCGGGGCTGTTGTCGTCGGTATCCGGTTCCCTGATTCGGATATAGTTTGAAGGAAAAAGAAGGGATTGCGATTTCTTTTTTTTA
ATGAAGATGTTGCTGTACAAGCAGAAGAAGAACCAGAATGTTAAGGGCAATAGGCTGTTGATCAGCATCAATGTGCTCGGCAGCGCTGGCCCGATTCGATTTATTGTGAG
CGAGGAGCAACTTGTTGCTGATGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGCCGGCTCCCAATTCTTGGCTCTGATCTTCACGATTTCCAGCTTTATTGTC
CGAGTGCGGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCACGTTGTGCAAGAAACCACAGGCAGAGAAAGCAGGAGAAGATGGA
AAAGCAGCATCACGGCCAGCCATCCATCGCAAAGCCTCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATATGAAAATCTATTCCCATTGAATCCGCGCAATGAT
GATGGGTGATAGCCTTCAATTAGGTTGGTTTTAGTTTGTTGTGAGCCTTTGCAATTTGTATTTTTCCTCCTTTTGTAATCTTGTTGGACCCGTATTTCAACTTGCTTTAA
AGTTGGGTGGGGTTCCCTCTCCTCTTCTTCAAATAAACACTTAGATTTTACCCCTTTGAAACGAATTGCATCATAGTTTTTGATTGGCCATGTATTGTTTAAAAGGTTAT
GGATCGAACTCGAAGAGTGTGTTCAATGAAAATGGGAGTTCGGCGCACATTAAGGAATTGTATAATTGAAAAGGTGGTGGTGGATGGTTTGATGTTGACTGTGTGAAATT
TGAAGCGCTATGTATATGACGTTTTGTGGATACTGATTATGTCATTGACAGAGCCTCAC
Protein sequenceShow/hide protein sequence
MKMLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDG
KAASRPAIHRKASGSWKSWINKSLNMKIYSH