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CmoCh04G023040 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G023040
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein SIS2
Genome locationCmo_Chr04:17138243..17140813
RNA-Seq ExpressionCmoCh04G023040
SyntenyCmoCh04G023040
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601944.1 hypothetical protein SDJN03_07177, partial [Cucurbita argyrosperma subsp. sororia]5.5e-6698.61Show/hide
Query:  MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        MASPIPYTSEAMARLLISTRAFPFPPLPLVPARA FRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKREAE
        LEELALNQAIMEEDEENKDGSSEI FEEKPALPRTRNRPKREAE
Subjt:  LEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKREAE

KAG7032638.1 hypothetical protein SDJN02_06688 [Cucurbita argyrosperma subsp. argyrosperma]4.2e-6698.61Show/hide
Query:  MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKREAE
        LEELALNQAIMEEDEENKDGSSEI FE KPALPRTRNRPKREAE
Subjt:  LEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKREAE

XP_022961614.1 uncharacterized protein LOC111462310 [Cucurbita moschata]2.6e-68100Show/hide
Query:  MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKREAEA
        LEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKREAEA
Subjt:  LEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKREAEA

XP_022990673.1 uncharacterized protein LOC111487491 [Cucurbita maxima]1.6e-6296.5Show/hide
Query:  MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        MASPIPYTSEAMARLLISTRAFPF   PLVPARAFFRPSKLSPAVRFSGDPSAAR LRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKREA
        LEELALNQAIMEEDEENKDGSSEI FEEKPALPRTRNRPKREA
Subjt:  LEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKREA

XP_023525740.1 uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo]1.5e-6099.25Show/hide
Query:  MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIM
        MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDGSSEIPFEEKPALPRTRNRPKREAE
        EEDEENKDGSSEI FEEKPALPRTRNRPKREAE
Subjt:  EEDEENKDGSSEIPFEEKPALPRTRNRPKREAE

TrEMBL top hitse value%identityAlignment
A0A0A0KTR1 Uncharacterized protein2.6e-4580.45Show/hide
Query:  MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPF  LPL P R FFRPS  SP VRF  +PS +R LRVVTTRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDGSSEIPFEEKPALPRTRNRPKREAE
        EEDE+ +DG SEI FEEKP +PRTRNRPKREAE
Subjt:  EEDEENKDGSSEIPFEEKPALPRTRNRPKREAE

A0A6J1FJ66 uncharacterized protein LOC1114447532.0e-5087.31Show/hide
Query:  MARLLISTRA-FPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAI
        MARLLISTRA FP   LP+ PARAFFRPSKLSPAVRF GD SA + LR+VTTRAGASTSSYIFAFSIPFSL+LVTALTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRA-FPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDGSSEIPFEEKPALPRTRNRPKREAE
        MEEDEENKD  S I FEEKPALPRTRNRPKREAE
Subjt:  MEEDEENKDGSSEIPFEEKPALPRTRNRPKREAE

A0A6J1HEK5 uncharacterized protein LOC1114623101.3e-68100Show/hide
Query:  MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKREAEA
        LEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKREAEA
Subjt:  LEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKREAEA

A0A6J1JTZ0 uncharacterized protein LOC1114874918.0e-6396.5Show/hide
Query:  MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        MASPIPYTSEAMARLLISTRAFPF   PLVPARAFFRPSKLSPAVRFSGDPSAAR LRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKREA
        LEELALNQAIMEEDEENKDGSSEI FEEKPALPRTRNRPKREA
Subjt:  LEELALNQAIMEEDEENKDGSSEIPFEEKPALPRTRNRPKREA

A0A6J1K146 uncharacterized protein LOC1114896901.0e-4987.31Show/hide
Query:  MARLLISTRA-FPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAI
        MARLLISTRA FP   LP+VPARA FRPSKLSPAVRF GD SA + LR+VTTRAGASTSSYIFAFSI FSLILVTALTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRA-FPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDGSSEIPFEEKPALPRTRNRPKREAE
        MEEDEENKD  S I FEEKPALPRTRNRPKREAE
Subjt:  MEEDEENKDGSSEIPFEEKPALPRTRNRPKREAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31560.1 high chlorophyll fluorescence 1534.7e-1542.86Show/hide
Query:  MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRF----SGDPSAARALR--VVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELA
        MARL +S    P  P  +    +  +P    PA  F    +G     R +R   V TRAG STSSY+ AF+IP +LI  T  T++KI D LD+ FLE++A
Subjt:  MARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRF----SGDPSAARALR--VVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELA

Query:  LNQAIMEEDEENKDGSSEIPFE---EKPALPRTRNRPKRE
        LNQAI +  E+ ++G  +I  +   ++P L RTRNRPKRE
Subjt:  LNQAIMEEDEENKDGSSEIPFE---EKPALPRTRNRPKRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGTCCAATTCCTTACACGTCTGAAGCTATGGCCAGGCTCCTTATCTCCACCAGAGCCTTCCCCTTTCCCCCTCTTCCCCTGGTTCCGGCACGGGCATTCTTCAG
ACCCTCCAAATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCAGCCGCCAGAGCCCTACGAGTGGTGACGACTCGTGCCGGTGCCAGCACCAGCAGTTACATCTTCG
CTTTCTCTATCCCCTTTTCTCTTATTCTCGTCACTGCCCTTACCGCTCTCAAAATCGGTGATAACCTGGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATA
ATGGAGGAAGATGAAGAGAACAAAGATGGTAGTTCAGAAATCCCTTTCGAAGAAAAACCCGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCCGAGGCCTAA
mRNA sequenceShow/hide mRNA sequence
ACCCATTTACATGACATCAAATTCAGCTTACAAGAATGGCCAGTCCAATTCCTTACACGTCTGAAGCTATGGCCAGGCTCCTTATCTCCACCAGAGCCTTCCCCTTTCCC
CCTCTTCCCCTGGTTCCGGCACGGGCATTCTTCAGACCCTCCAAATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCAGCCGCCAGAGCCCTACGAGTGGTGACGAC
TCGTGCCGGTGCCAGCACCAGCAGTTACATCTTCGCTTTCTCTATCCCCTTTTCTCTTATTCTCGTCACTGCCCTTACCGCTCTCAAAATCGGTGATAACCTGGACAAGA
AGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATAATGGAGGAAGATGAAGAGAACAAAGATGGTAGTTCAGAAATCCCTTTCGAAGAAAAACCCGCTCTTCCACGAACT
CGAAACCGCCCTAAAAGGGAAGCCGAGGCCTAAATAGCAGCATAGATTTTGGATGTGAACATAATCGGATCAGACAGGCAGAAAAATGGCTCAAAGGAACTAGAAAGCTT
CTATGTATACTGTATGTTACTTAGTTTTCTTCATCTTCTTCTTAATCATGATTAGTATAAAGTTAGTTTGTATGGTGAGTGAATTTAATGTTTAATATTATTGTTATATA
TCCTTCAAATTGAAATATTTTCAAAAAGCAAATAGGGGGTATTATCTTAA
Protein sequenceShow/hide protein sequence
MASPIPYTSEAMARLLISTRAFPFPPLPLVPARAFFRPSKLSPAVRFSGDPSAARALRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAI
MEEDEENKDGSSEIPFEEKPALPRTRNRPKREAEA