| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 0.0e+00 | 57.93 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
M SIVQLLASEKLNGDNY+ WKSNLNTILV+DDL+FVLTEECP NANRT R+AYDRW+KANDKARVYILAS++DVLAKKHD + TAK IM+SL+
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
Query: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
MFGQPS+SLRHEAIK+IY RMKEGTSVREHVLDMM+HFN+AE N IDE +QVSFI+ SLPKSF F+TN +NKIE+NLT LLNELQ +Q+L +KG
Subjt: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAISK-KLLRGSSSQNKSGPSTSKSVLMKKKGKGKNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK----------------
+ EANVA++K K +RGSSS+NK GPS ++ MKKKGKG K P K K + ADKGKCFHCN++GHWKRNCPKYLAEKKAEK
Subjt: QTGEANVAISK-KLLRGSSSQNKSGPSTSKSVLMKKKGKGKNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK----------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------------------------------------TQQG
T +G
Subjt: ------------------------------------------------------------------------------------------------TQQG
Query: YRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS
RAK LELVH+DLCGPMNVKARGGYEYFISFIDD+SRYG++YL+HHKSE+ EKF+EYK EV+N +GKTIKTLRSDRGGEYMD +FQDY+IE GI+SQLS
Subjt: YRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS
Query: ATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK---------------------------------
A PQQNGVSERRNRTLLDMVRSMMS+AQLPD FWGYA+ETA +ILN VP+KSVLETPYELWKGRK
Subjt: ATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK---------------------------------
Query: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQPDRY
GYPKE++GGLFY PQEN+VFVSTNATFLEEDH RNHQPRSK+VL E+ K ATDK + ST+VVD A+ S QSH SQELR+PRRSGRV+ QP+RY
Subjt: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQPDRY
Query: LGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK-----------------------
LGL ETQ+IIPDDGVEDPLTYKQAMND DRDQWIKAMNLEMESMYFNSVW LVD P VKPIGCKWIYKRKRDQ GK
Subjt: LGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK-----------------------
Query: --------------------------------------------------------------------------------------------NVDEPCVY
NVDEPCVY
Subjt: --------------------------------------------------------------------------------------------NVDEPCVY
Query: KRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKE
K+IVNS VAFL+LYVDDILLIGNDV LTD+K WL TQFQMKDLGEAQ++LGI+I+RNRKNKTLA+SQASYIDK+L RYKMQ+SKKG LPFRHG+HLSKE
Subjt: KRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKE
Query: QSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRKSTS
Q PKTPQEVEDM++IPY+SAVGSLMYAMLCTRPDICY+VGIVSRYQSNPGR HWTAVKNILKYLRRTR+YML+YG KDLIL GYTDSDFQ+D D+RKSTS
Subjt: QSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRKSTS
Query: GSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
GSVFTLNGGA++WRS+KQ CIADSTMEAEYV ACEAAKE+VWLRKFLTDLEVVPNMHLP+TLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIV RGD
Subjt: GSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
Query: VIVTQ
V+VTQ
Subjt: VIVTQ
|
|
| KAA0026233.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 63.76 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
++++ + +LA++KLNG+NY +WK+ +N +L+IDDL+FVL E+CP +NA RT R+ Y+RW KAN+KAR YILAS+S+VLAKKH+ M TA+EIM+SL+
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
Query: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
MFGQ S+ ++H+A+KYIYN RM EG SVREHVL+MMVHFNVA NEAVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y LT LLNELQT++SL+ KG
Subjt: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK---------TQQG
Q GEANVA S +K RGS+S KS PS+S + KKK G+G K + + K KA KG CF CN+ GHWKRNCPKYLA+KK K T +G
Subjt: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK---------TQQG
Query: YRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS
+RAKE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALEKF+EYK EV+N L KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLS
Subjt: YRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS
Query: ATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK---------------------------------
A PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSV ETP +LW G K
Subjt: ATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK---------------------------------
Query: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQPDRY
GYPK T+GG FYDP++N+VFVSTNATFLEEDH+R H+PRSK+VL+E+SKE T+ +TRVV++ RVV +S ++H Q LR PRRSGRV P RY
Subjt: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQPDRY
Query: LGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK-----------------------
+ L ET +I D +EDPLT+K+AM D D+D+WIKAMNLE+ESMYFNSVW+LVDQPDGVKPIGCKWIYKRKR GK
Subjt: LGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK-----------------------
Query: --------------------------------------------------------------------------------------------NVDEPCVY
VDEPCVY
Subjt: --------------------------------------------------------------------------------------------NVDEPCVY
Query: KRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKE
KRI+N +VAFLVLYVDDILLIGND+ +LTDIK WLATQFQMKDLGEAQFVLGI+I R+RKNK LALSQASYIDK++++Y MQ+SK+GLLPFRHGV LSKE
Subjt: KRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKE
Query: QSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRKSTS
Q PKTPQ+VE+M+HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG AHWTAVK ILKYLRRTRDY L+YG KDLIL GYTDSDFQTD DSRKSTS
Subjt: QSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRKSTS
Query: GSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
GSVFTLNGGA++WRSIKQGCIADSTMEAEYV ACEAAKE+VWLR FL DLEVVPNM P+TLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV RGD
Subjt: GSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
Query: VIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
VIVTQIAS HN+ADPFTKPLTAKVFEGHL SLGLR M
Subjt: VIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
|
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| KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 54.78 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
MT++ + +LA++KLNG+NY +WK+ +NT+L+IDDL+FVL EECP +NA RT R+ Y+RW KAN+KAR YILAS+S+VLAKKH+ M TA+EIM+SL+
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
Query: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
MFGQ S+ ++H+A+KYIYN RM EG SVREHVL+MMVHFNVAE N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y LT LLNELQT++SL+ KG
Subjt: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK-------------
Q GEANVA S +K RGS+S KS PS+S + KKK G+G K + + K KA KG CFHCN+ GHWKRNCPKYLAEKK K
Subjt: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK-------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------------------------T
T
Subjt: ---------------------------------------------------------------------------------------------------T
Query: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
+G+RAKE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALEKF+EYK EV+N L KTIKT RSDRGGEYMDL+FQ+Y++E GI S
Subjt: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
Query: QLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK------------------------------
QLSA G PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSV ETP +LW GRK
Subjt: QLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK------------------------------
Query: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQP
GYPK T+GG FYDP++N+VFVSTNATFLEEDH+R H+PRSK+VL+E+SKE T+ +TRVV++ TRVV +S ++H Q LR PRRSGRV P
Subjt: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQP
Query: DRYLGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK--------------------
RY+ L ET +I D +EDPLT+K+AM D D+D+WIKAMNLE+ESMYFNSVW+LVDQPDGVKPIGCKWIYKRKR GK
Subjt: DRYLGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK--------------------
Query: -----------------------------------------------------------------------------------------------NVDEP
VDEP
Subjt: -----------------------------------------------------------------------------------------------NVDEP
Query: CVYKRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHL
CVYKRI+N +VAFLVLYVDDILLIGND+ +LTDIK WLATQFQMKDLGEAQFVLGI+I R+RKNK LALSQASYIDK++++Y MQ+SK+GLLPFRHGV L
Subjt: CVYKRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHL
Query: SKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRK
SKEQ PKTPQ+VE+M+HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG AHWTAVK ILKYLRRTRDY L+YG KDLIL GYTDSDFQTD DSRK
Subjt: SKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRK
Query: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
STSGSVFTLNGGA++WRSIKQGCIADSTMEAEYV ACEAAKE+VWLR FL DLEVVPNM P+TLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV
Subjt: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
Query: RGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
RGDVIVTQIAS HN+ADPFTKPLTAKVFEGHL SLGLR M
Subjt: RGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
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| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 54.78 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
MT++ + +LA++KLNG+NY +WK+ +NT+L+IDDL+FVL EECP +NA RT R+ Y+RW KAN+KAR YILAS+S+VLAKKH+ M TA+EIM+SL+
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
Query: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
MFGQ S+ ++H+A+KYIYN RM EG SVREHVL+MMVHFNVAE N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y LT LLNELQT++SL+ KG
Subjt: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK-------------
Q GEANVA S +K RGS+S KS PS+S + KKK G+G K + + K KA KG CFHCN+ GHWKRNCPKYLAEKK K
Subjt: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK-------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------------------------T
T
Subjt: ---------------------------------------------------------------------------------------------------T
Query: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
+G+RAKE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALEKF+EYK EV+N L KTIKT RSDRGGEYMDL+FQ+Y++E GI S
Subjt: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
Query: QLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK------------------------------
QLSA G PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSV ETP +LW GRK
Subjt: QLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK------------------------------
Query: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQP
GYPK T+GG FYDP++N+VFVSTNATFLEEDH+R H+PRSK+VL+E+SKE T+ +TRVV++ TRVV +S ++H Q LR PRRSGRV P
Subjt: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQP
Query: DRYLGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK--------------------
RY+ L ET +I D +EDPLT+K+AM D D+D+WIKAMNLE+ESMYFNSVW+LVDQPDGVKPIGCKWIYKRKR GK
Subjt: DRYLGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK--------------------
Query: -----------------------------------------------------------------------------------------------NVDEP
VDEP
Subjt: -----------------------------------------------------------------------------------------------NVDEP
Query: CVYKRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHL
CVYKRI+N +VAFLVLYVDDILLIGND+ +LTDIK WLATQFQMKDLGEAQFVLGI+I R+RKNK LALSQASYIDK++++Y MQ+SK+GLLPFRHGV L
Subjt: CVYKRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHL
Query: SKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRK
SKEQ PKTPQ+VE+M+HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG AHWTAVK ILKYLRRTRDY L+YG KDLIL GYTDSDFQTD DSRK
Subjt: SKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRK
Query: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
STSGSVFTLNGGA++WRSIKQGCIADSTMEAEYV ACEAAKE+VWLR FL DLEVVPNM P+TLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV
Subjt: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
Query: RGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
RGDVIVTQIAS HN+ADPFTKPLTAKVFEGHL SLGLR M
Subjt: RGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 0.0e+00 | 54.85 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
MT++ + +LA++KLNG+NY +WK N NT+L+IDDL+FVL EECP +NA RT R+ Y+RW KAN+KAR YILAS+S+VLAKKH+ M TA+EIM+SL+
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
Query: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
MFGQ S+ ++H+A+KYIYN RM EG SVREHVL+MMVHFNVAE N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y LT LLNELQT++SL+ KG
Subjt: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK-------------
Q GEANVA S +K RGS+S KS PS+S + KKK G+G K + + K KA KG CFHCN+ GHWKRNCPKYLAEKK K
Subjt: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK-------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------------------------T
T
Subjt: ---------------------------------------------------------------------------------------------------T
Query: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
+G+RAKE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALEKF+EYK EV+N L KTIKT RSDRGGEYMDL+FQ+Y++E GI S
Subjt: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
Query: QLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK------------------------------
QLSA G PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSV ETP +LW GRK
Subjt: QLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK------------------------------
Query: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQP
GYPK T+GG FYDP++N+VFVSTNATFLEEDH+R H+PRSK+VL+E+SKE T+ +TRVV++ TRVV +S ++H Q LR PRRSGRV P
Subjt: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQP
Query: DRYLGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK--------------------
RY+ L ET +I D +EDPLT+K+AM D D+D+WIKAMNLE+ESMYFNSVW+LVDQPDGVKPIGCKWIYKRKR GK
Subjt: DRYLGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK--------------------
Query: -----------------------------------------------------------------------------------------------NVDEP
VDEP
Subjt: -----------------------------------------------------------------------------------------------NVDEP
Query: CVYKRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHL
CVYKRI+N +VAFLVLYVDDILLIGND+ +LTDIK WLATQFQMKDLGEAQFVLGI+I R+RKNK LALSQASYIDK++++Y MQ+SK+GLLPFRHGV L
Subjt: CVYKRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHL
Query: SKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRK
SKEQ PKTPQ+VE+M+HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG AHWTAVK ILKYLRRTRDY L+YG KDLIL GYTDSDFQTD DSRK
Subjt: SKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRK
Query: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
STSGSVFTLNGGA++WRSIKQGCIADSTMEAEYV ACEAAKE+VWLR FL DLEVVPNM P+TLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV
Subjt: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
Query: RGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
RGDVIVTQIAS HN+ADPFTKPLTAKVFEGHL SLGLR M
Subjt: RGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 0.0e+00 | 54.78 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
MT++ + +LA++KLNG+NY +WK+ +NT+L+IDDL+FVL EECP +NA RT R+ Y+RW KAN+KAR YILAS+S+VLAKKH+ M TA+EIM+SL+
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
Query: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
MFGQ S+ ++H+A+KYIYN RM EG SVREHVL+MMVHFNVAE N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y LT LLNELQT++SL+ KG
Subjt: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK-------------
Q GEANVA S +K RGS+S KS PS+S + KKK G+G K + + K KA KG CFHCN+ GHWKRNCPKYLAEKK K
Subjt: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK-------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------------------------T
T
Subjt: ---------------------------------------------------------------------------------------------------T
Query: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
+G+RAKE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALEKF+EYK EV+N L KTIKT RSDRGGEYMDL+FQ+Y++E GI S
Subjt: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
Query: QLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK------------------------------
QLSA G PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSV ETP +LW GRK
Subjt: QLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK------------------------------
Query: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQP
GYPK T+GG FYDP++N+VFVSTNATFLEEDH+R H+PRSK+VL+E+SKE T+ +TRVV++ TRVV +S ++H Q LR PRRSGRV P
Subjt: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQP
Query: DRYLGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK--------------------
RY+ L ET +I D +EDPLT+K+AM D D+D+WIKAMNLE+ESMYFNSVW+LVDQPDGVKPIGCKWIYKRKR GK
Subjt: DRYLGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK--------------------
Query: -----------------------------------------------------------------------------------------------NVDEP
VDEP
Subjt: -----------------------------------------------------------------------------------------------NVDEP
Query: CVYKRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHL
CVYKRI+N +VAFLVLYVDDILLIGND+ +LTDIK WLATQFQMKDLGEAQFVLGI+I R+RKNK LALSQASYIDK++++Y MQ+SK+GLLPFRHGV L
Subjt: CVYKRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHL
Query: SKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRK
SKEQ PKTPQ+VE+M+HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG AHWTAVK ILKYLRRTRDY L+YG KDLIL GYTDSDFQTD DSRK
Subjt: SKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRK
Query: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
STSGSVFTLNGGA++WRSIKQGCIADSTMEAEYV ACEAAKE+VWLR FL DLEVVPNM P+TLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV
Subjt: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
Query: RGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
RGDVIVTQIAS HN+ADPFTKPLTAKVFEGHL SLGLR M
Subjt: RGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
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| A0A5A7SNP8 Gag/pol protein | 0.0e+00 | 63.76 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
++++ + +LA++KLNG+NY +WK+ +N +L+IDDL+FVL E+CP +NA RT R+ Y+RW KAN+KAR YILAS+S+VLAKKH+ M TA+EIM+SL+
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
Query: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
MFGQ S+ ++H+A+KYIYN RM EG SVREHVL+MMVHFNVA NEAVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y LT LLNELQT++SL+ KG
Subjt: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK---------TQQG
Q GEANVA S +K RGS+S KS PS+S + KKK G+G K + + K KA KG CF CN+ GHWKRNCPKYLA+KK K T +G
Subjt: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK---------TQQG
Query: YRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS
+RAKE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALEKF+EYK EV+N L KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLS
Subjt: YRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLS
Query: ATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK---------------------------------
A PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSV ETP +LW G K
Subjt: ATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK---------------------------------
Query: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQPDRY
GYPK T+GG FYDP++N+VFVSTNATFLEEDH+R H+PRSK+VL+E+SKE T+ +TRVV++ RVV +S ++H Q LR PRRSGRV P RY
Subjt: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQPDRY
Query: LGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK-----------------------
+ L ET +I D +EDPLT+K+AM D D+D+WIKAMNLE+ESMYFNSVW+LVDQPDGVKPIGCKWIYKRKR GK
Subjt: LGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK-----------------------
Query: --------------------------------------------------------------------------------------------NVDEPCVY
VDEPCVY
Subjt: --------------------------------------------------------------------------------------------NVDEPCVY
Query: KRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKE
KRI+N +VAFLVLYVDDILLIGND+ +LTDIK WLATQFQMKDLGEAQFVLGI+I R+RKNK LALSQASYIDK++++Y MQ+SK+GLLPFRHGV LSKE
Subjt: KRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKE
Query: QSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRKSTS
Q PKTPQ+VE+M+HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG AHWTAVK ILKYLRRTRDY L+YG KDLIL GYTDSDFQTD DSRKSTS
Subjt: QSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRKSTS
Query: GSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
GSVFTLNGGA++WRSIKQGCIADSTMEAEYV ACEAAKE+VWLR FL DLEVVPNM P+TLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV RGD
Subjt: GSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGD
Query: VIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
VIVTQIAS HN+ADPFTKPLTAKVFEGHL SLGLR M
Subjt: VIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
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| A0A5A7ULH1 Gag/pol protein | 0.0e+00 | 64.07 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
MT++ + +LA++KLNG+NY +WK+ +NT+L+IDDL+FVL EECP +NA RT R+ Y+RW K N+KAR YILAS+S+VLAKKH+ M TA+EIM SL+
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
Query: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
MFGQ S+ ++H+A+KYI N RM EG SVREHV++MMVHFNVAE N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y LT LLNELQT++SL+ KG
Subjt: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK-------------
Q GE NVA S +K RGS+S KS PS+S + KKK G+G K + + K KA KG CFHCN+ GHWKRNCPKYLAEKK K
Subjt: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK-------------
Query: -----------------------------TQQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLG
T++G+RAKE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALEKF+EYK EV+ L
Subjt: -----------------------------TQQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLG
Query: KTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK
KTIKT RSDRGGEYMDL+FQ+Y++E GI SQLSA G PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSV ETP +LW GRK
Subjt: KTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK
Query: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQPDRY
EEDH+R H PRSK+VL+E+SK T+ +TRVV++ TRVV +S ++H Q LR PRRSGRV P RY
Subjt: GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQPDRY
Query: LGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK-----------------NVDEPC
+ L ET +I D +EDPLT+K+AM D D+D+WIKAMNLE+ESMYFNSVW+LVDQPDGVKPIGCKWIYKRKR GK VD
Subjt: LGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK-----------------NVDEPC
Query: VYK--------RIVNSTVAFL-----VLYVDDILLIGNDVR--------------ILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASY
+ RI+ S A+ + V L GN +LTDIK WLATQFQMKDLGEAQFVLGI+I R+RKNK LALSQASY
Subjt: VYK--------RIVNSTVAFL-----VLYVDDILLIGNDVR--------------ILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASY
Query: IDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYM
IDK++++Y MQ+SK+ LLPFRHGV LSKEQ PKTPQ+VE+M+HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG AHWTAVK ILKYLRRTRDYM
Subjt: IDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYM
Query: LMYGVKDLILIGYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVA
L+YG KDLIL GYTDSDFQTD DSRKSTSGSVFTLNGGA++WRSIKQGCIADSTME EYV ACEAAKE VWLR FL DLEVVPNM P+TLYCDN+G VA
Subjt: LMYGVKDLILIGYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVA
Query: NSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
NS+EPRSHKRGKHIERKYHLIREIV RGDVIVTQI S HN+ADPFTKPLTAKVFEGHL SLG+R M
Subjt: NSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
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| A0A5D3BHG7 Gag/pol protein | 0.0e+00 | 59.49 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
MT + + +LA++KLNG+NY +WK+ +N +L+IDDLKFVL EECP +NA +T R+ Y+RW K N+K R YILAS+S+VLAKKH+ M TA+EIM+SL+
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
Query: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
MFGQ S+ + H+A+KYIYN RM EG SVREHVL+MMVHFNVAE N AVIDE SQ G
Subjt: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK-------------
Q GEANVA S +K RGS+S KS PS+S + KKK G+G K + + K KA KG CFH N+ GHWKRNCPKYLAEKK K
Subjt: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK-------------
Query: -----------------------------TQQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLG
T +G+RAKE LELVH+DLCGPMNVKARG +EYFI+F DDYSRYGY+YLM HKSEALEKF+EYK EV+N L
Subjt: -----------------------------TQQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLG
Query: KTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK
KTIKT RSDRGGEYMDL+FQ+Y++E I SQLSA G PQQNGVSERRNRTLLDMVRSM+S+A LP+ FWGYAV+TA YILN VP+KSV ETP +LW GRK
Subjt: KTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK
Query: ---------------------------------GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTR
GYPK T+GG FYDP++N+VFVSTNATFLEEDH+R H+PRSK+VL+E+SKE T+ +TRVV++ TR
Subjt: ---------------------------------GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTR
Query: VVDGADTSGQSHPSQELRMPRRSGRVITQPDRYLGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWI
VV +S ++H Q LR PRRSGRV P RY+ L ET +I D +EDPLT+K+AM D D+D+WIKAMNLE+ESMYFNSVW+LVDQPDGVKPIGCKWI
Subjt: VVDGADTSGQSHPSQELRMPRRSGRVITQPDRYLGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWI
Query: YKRKRDQTGK------------------------------------------------------------------------------------------
YKRKR GK
Subjt: YKRKRDQTGK------------------------------------------------------------------------------------------
Query: -------------------------NVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALS
VDEPCVYKRI+N +VAFLVLYVDDILLIGND+ +LTDIK WLATQFQMKDLGEAQFVLGI+I R+RKNK LALS
Subjt: -------------------------NVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALS
Query: QASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRT
QASYIDK++++Y MQ+SK+GLLPFRHGV LSKEQ PKTPQ+VE+M+HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG AHWTAVK ILKYLRRT
Subjt: QASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRT
Query: RDYMLMYGVKDLILIGYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNS
RDY L+YG KDLIL GYTDSDFQTD DSRKSTSGSVFTLNGGA++WRSIKQGCIADSTMEAEYV ACEAAKE+VWLR FL DLEVVPNM P+TLYCDNS
Subjt: RDYMLMYGVKDLILIGYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNS
Query: GAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
GAVANS+EPRSHKRGKHIERKYHLIREIV RGDVIVTQIAS HN+ADPFTKPLTAKVFEGHL SLGLR M
Subjt: GAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
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| A0A5D3CPJ6 Gag/pol protein | 0.0e+00 | 54.78 | Show/hide |
Query: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
MT++ + +LA++KLNG+NY +WK+ +NT+L+IDDL+FVL EECP +NA RT R+ Y+RW KAN+KAR YILAS+S+VLAKKH+ M TA+EIM+SL+
Subjt: MTNSIVQLLASEKLNGDNYTTWKSNLNTILVIDDLKFVLTEECPPNTNSNANRTARDAYDRWIKANDKARVYILASISDVLAKKHDVMGTAKEIMESLKG
Query: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
MFGQ S+ ++H+A+KYIYN RM EG SVREHVL+MMVHFNVAE N AVIDE SQVSFI+ SLP+SF QFR+N VMNKI Y LT LLNELQT++SL+ KG
Subjt: MFGQPSFSLRHEAIKYIYNCRMKEGTSVREHVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKG
Query: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK-------------
Q GEANVA S +K RGS+S KS PS+S + KKK G+G K + + K KA KG CFHCN+ GHWKRNCPKYLAEKK K
Subjt: QTGEANVAIS-KKLLRGSSSQNKSGPSTSKSVLMKKK--GKG-KNKIPTNRKNKVQKADKGKCFHCNENGHWKRNCPKYLAEKKAEK-------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------------------------T
T
Subjt: ---------------------------------------------------------------------------------------------------T
Query: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
+G+RAKE LELVH+DLCGPMNVKARGG+EYFI+F DDYSRYGY+YLM HKSEALEKF+EYK EV+N L KTIKT RSDRGGEYMDL+FQ+Y++E GI S
Subjt: QQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRS
Query: QLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK------------------------------
QLSA G PQQNGVSERRNRTLLDMVRSMMS+A LP+ FWGYAV+TA YILN VP+KSV ETP +LW GRK
Subjt: QLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLETPYELWKGRK------------------------------
Query: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQP
GYPK T+GG FYDP++N+VFVSTNATFLEEDH+R H+PRSK+VL+E+SKE T+ +TRVV++ TRVV +S ++H Q LR PRRSGRV P
Subjt: ---GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEISKEATDKTTRVVDQAGPSTRVVDGADTSGQSHPSQELRMPRRSGRVITQP
Query: DRYLGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK--------------------
RY+ L ET +I D +EDPLT+K+AM D D+D+WIKAMNLE+ESMYFNSVW+LVDQPDGVKPIGCKWIYKRKR GK
Subjt: DRYLGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK--------------------
Query: -----------------------------------------------------------------------------------------------NVDEP
VDEP
Subjt: -----------------------------------------------------------------------------------------------NVDEP
Query: CVYKRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHL
CVYKRI+N +VAFLVLYVDDILLIGND+ +LTDIK WLATQFQMKDLGEAQFVLGI+I R+RKNK LALSQASYIDK++++Y MQ+SK+GLLPFRHGV L
Subjt: CVYKRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHL
Query: SKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRK
SKEQ PKTPQ+VE+M+HIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPG AHWTAVK ILKYLRRTRDY L+YG KDLIL GYTDSDFQTD DSRK
Subjt: SKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLILIGYTDSDFQTDVDSRK
Query: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
STSGSVFTLNGGA++WRSIKQGCIADSTMEAEYV ACEAAKE+VWLR FL DLEVVPNM P+TLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV
Subjt: STSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQ
Query: RGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
RGDVIVTQIAS HN+ADPFTKPLTAKVFEGHL SLGLR M
Subjt: RGDVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGLRVM
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.1e-71 | 23.74 | Show/hide |
Query: KETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSATG
K L +VH+D+CGP+ YF+ F+D ++ Y YL+ +KS+ F+++ + + + L D G EY+ + + ++ GI L+
Subjt: KETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSATG
Query: MPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLE---TPYELWKGRKGYPK-------------ETKGGLF---------
PQ NGVSER RT+ + R+M+S A+L FWG AV TATY++N +P++++++ TPYE+W +K Y K + K G F
Subjt: MPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSVLE---TPYELWKGRKGYPK-------------ETKGGLF---------
Query: --YDPQENRVFVSTNATFL--------EEDHVRNHQPRSKLVLSEISKEATDK-----TTRVVDQAGPS-TRVVDGADTSGQSHPSQELRMPRRSGRVI-
Y+P +++ + N F+ E + V + + + V + SKE+ +K + +++ P+ ++ D S S+ P S ++I
Subjt: --YDPQENRVFVSTNATFL--------EEDHVRNHQPRSKLVLSEISKEATDK-----TTRVVDQAGPS-TRVVDGADTSGQSHPSQELRMPRRSGRVI-
Query: -------------------TQPDRYL-------------------------GLAETQVIIPDDGVEDP---------------------LTYKQAMND--
+ ++Y +ET + + G+++P ++Y + N
Subjt: -------------------TQPDRYL-------------------------GLAETQVIIPDDGVEDP---------------------LTYKQAMND--
Query: -----------------------EDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK---------------------------
+D+ W +A+N E+ + N+ W + +P+ + +W++ K ++ G
Subjt: -----------------------EDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGK---------------------------
Query: -------------------------------------------------NVDEPCVYKR------------------------IVNSTV-----------
N D C + VNS+V
Subjt: -------------------------------------------------NVDEPCVYKR------------------------IVNSTV-----------
Query: ----AFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPK
+++LYVDD+++ D+ + + K +L +F+M DL E + +GI I + + LSQ++Y+ K+L ++ M++ P ++ S
Subjt: ----AFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPK
Query: TPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLI----LIGYTDSDFQTDVDSRKSTS
++ + P S +G LMY MLCTRPD+ AV I+SRY S W +K +L+YL+ T D L++ K+L +IGY DSD+ RKST+
Subjt: TPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGVKDLI----LIGYTDSDFQTDVDSRKSTS
Query: GSVFTL-NGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRG
G +F + + I W + +Q +A S+ EAEY+ EA +E++WL+ LT + + + P+ +Y DN G ++ + P HKR KHI+ KYH RE VQ
Subjt: GSVFTL-NGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRG
Query: DVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGL
+ + I +E+ +AD FTKPL A F LGL
Subjt: DVIVTQIASEHNIADPFTKPLTAKVFEGHLVSLGL
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| P0CV72 Secreted RxLR effector protein 161 | 2.3e-30 | 48.87 | Show/hide |
Query: MKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMY-GVKDLILIGYTDSDFQTDVDSRKSTSGSVFTLNGGA
MK++PY SAVG++MY M+ TRPD+ AVG++S++ S+P HW A+K +L+YL+ T+ Y L + L+GY+D+D+ DV+SR+STSG +F LNGG
Subjt: MKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMY-GVKDLILIGYTDSDFQTDVDSRKSTSGSVFTLNGGA
Query: IIWRSIKQGCIADSTMEAEYVVACEAAKESVWL
+ WRS KQ +A S+ E EY+ EA +E+VWL
Subjt: IIWRSIKQGCIADSTMEAEYVVACEAAKESVWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.8e-124 | 33.29 | Show/hide |
Query: RAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSA
R L+LV++D+CGPM +++ GG +YF++FIDD SR ++Y++ K + + F+++ V+ G+ +K LRSD GGEY F++Y HGIR + +
Subjt: RAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSA
Query: TGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSV-LETPYELWKGRK---------------------------------
G PQ NGV+ER NRT+++ VRSM+ A+LP FWG AV+TA Y++N P+ + E P +W ++
Subjt: TGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSV-LETPYELWKGRK---------------------------------
Query: --GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEI----------------SKEATDKTTRVVDQAGPSTRVVDGADTSGQ--SHP
GY E G +DP + +V S + F E VR S+ V + I ++ TD+ + +Q G + D + HP
Subjt: --GYPKETKGGLFYDPQENRVFVSTNATFLEEDHVRNHQPRSKLVLSEI----------------SKEATDKTTRVVDQAGPSTRVVDGADTSGQ--SHP
Query: SQ--ELRMP-RRSGRVITQPDRYLGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRD----
+Q E P RRS R + RY + V+I DD +P + K+ ++ +++Q +KAM EMES+ N ++LV+ P G +P+ CKW++K K+D
Subjt: SQ--ELRMP-RRSGRVITQPDRYLGLAETQVIIPDDGVEDPLTYKQAMNDEDRDQWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRD----
Query: -------------QTGKNVD--------------------------------------------------------------------------------
+ K +D
Subjt: -------------QTGKNVD--------------------------------------------------------------------------------
Query: ------------------EPCVY-KRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKML
+PCVY KR + L+LYVDD+L++G D ++ +K L+ F MKDLG AQ +LG++I+R R ++ L LSQ YI+++L
Subjt: ------------------EPCVY-KRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKML
Query: IRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGV
R+ M+++K P + LSK+ P T +E +M +PY+SAVGSLMYAM+CTRPDI +AVG+VSR+ NPG+ HW AVK IL+YLR T L +G
Subjt: IRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMYGV
Query: KDLILIGYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEP
D IL GYTD+D D+D+RKS++G +FT +GGAI W+S Q C+A ST EAEY+ A E KE +WL++FL +L + ++ +YCD+ A+ SK
Subjt: KDLILIGYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEP
Query: RSHKRGKHIERKYHLIREIVQRGDVIVTQIASEHNIADPFTKPLTAKVFE
H R KHI+ +YH IRE+V + V +I++ N AD TK + FE
Subjt: RSHKRGKHIERKYHLIREIVQRGDVIVTQIASEHNIADPFTKPLTAKVFE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.9e-40 | 34.65 | Show/hide |
Query: TVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTP
++ ++++YVDDIL+ GND +L + L+ +F +KD E + LGIE R L LSQ YI +L R M +K P LS K
Subjt: TVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTP
Query: QEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDY-MLMYGVKDLILIGYTDSDFQTDVDSRKSTSGSVFT
E Y VGSL Y + TRPDI YAV +S++ P H A+K IL+YL T ++ + + L L Y+D+D+ D D ST+G +
Subjt: QEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDY-MLMYGVKDLILIGYTDSDFQTDVDSRKSTSGSVFT
Query: LNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQ
L I W S KQ + S+ EAEY + E W+ LT+L + + P +YCDN GA P H R KHI YH IR VQ G + V
Subjt: LNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQ
Query: IASEHNIADPFTKPLTAKVFEGHLVSLGL
+++ +AD TKPL+ F+ +G+
Subjt: IASEHNIADPFTKPLTAKVFEGHLVSLGL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.2e-20 | 30.94 | Show/hide |
Query: NCPKYLAEK--KAEKTQQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEY
+C L K K +Q + LE +++D+ + + Y Y++ F+D ++RY +LY + KS+ E F +K ++N I T SD GGE+
Subjt: NCPKYLAEK--KAEKTQQGYRAKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEY
Query: MDLRFQDYMIEHGIRSQLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSV-LETPYE
+ L +Y +HGI S P+ NG+SER++R +++ +++S A +P +W YA A Y++N +PT + LE+P++
Subjt: MDLRFQDYMIEHGIRSQLSATGMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSV-LETPYE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.0e-42 | 34.04 | Show/hide |
Query: TVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTP
++ ++++YVDDIL+ GND +L L+ +F +K+ + + LGIE R + L LSQ Y +L R M +K P L+ K P
Subjt: TVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTP
Query: QEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDY-MLMYGVKDLILIGYTDSDFQTDVDSRKSTSGSVFT
E Y VGSL Y + TRPD+ YAV +S+Y P HW A+K +L+YL T D+ + + L L Y+D+D+ D D ST+G +
Subjt: QEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDY-MLMYGVKDLILIGYTDSDFQTDVDSRKSTSGSVFT
Query: LNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQ
L I W S KQ + S+ EAEY + E W+ LT+L + + P +YCDN GA P H R KHI YH IR VQ G + V
Subjt: LNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLEVVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTQ
Query: IASEHNIADPFTKPLTAKVFEGHLVSLGL
+++ +AD TKPL+ F+ +G+
Subjt: IASEHNIADPFTKPLTAKVFEGHLVSLGL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.9e-22 | 33.75 | Show/hide |
Query: AKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSAT
+ + LE +++D+ + + Y Y++ F+D ++RY +LY + KS+ + F +K+ V+N I TL SD GGE++ LR DY+ +HGI S
Subjt: AKETLELVHTDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSEALEKFREYKTEVQNLLGKTIKTLRSDRGGEYMDLRFQDYMIEHGIRSQLSAT
Query: GMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSV-LETPYE
P+ NG+SER++R +++M +++S A +P +W YA A Y++N +PT + L++P++
Subjt: GMPQQNGVSERRNRTLLDMVRSMMSFAQLPDPFWGYAVETATYILNMVPTKSV-LETPYE
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 5.7e-32 | 29.15 | Show/hide |
Query: ESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTG----KNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLG
+S+ N+V L G+K +W K G ++ + + +I + +++YVDDI++ N+ + ++K L + F+++DLG ++ LG
Subjt: ESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTG----KNVDEPCVYKRIVNSTVAFLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLG
Query: IEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRA
+EI R+ + + Q Y +L + K +P V S + D K Y +G LMY + TR DI +AV +S++ P A
Subjt: IEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEVEDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRA
Query: HWTAVKNILKYLRRTRDYMLMYGVK-DLILIGYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLE
H AV IL Y++ T L Y + ++ L ++D+ FQ+ D+R+ST+G L I W+S KQ ++ S+ EAEY A E +WL +F +L+
Subjt: HWTAVKNILKYLRRTRDYMLMYGVK-DLILIGYTDSDFQTDVDSRKSTSGSVFTLNGGAIIWRSIKQGCIADSTMEAEYVVACEAAKESVWLRKFLTDLE
Query: VVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIRE
+ + P L+CDN+ A+ + H+R KHIE H +RE
Subjt: VVPNMHLPVTLYCDNSGAVANSKEPRSHKRGKHIERKYHLIRE
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 3.9e-04 | 36.11 | Show/hide |
Query: TRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMY-GVKDLILIGYTDSDFQTDVDSRKSTSG
TRPD+ +AV +S++ S A AV +L Y++ T L Y DL L + DSD+ + D+R+S +G
Subjt: TRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDYMLMY-GVKDLILIGYTDSDFQTDVDSRKSTSG
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 4.5e-21 | 32.48 | Show/hide |
Query: FLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEV
+L+LYVDDILL G+ +L + L++ F MKDLG + LGI+I + L LSQ Y +++L M D K P ++ S + K P
Subjt: FLVLYVDDILLIGNDVRILTDIKHWLATQFQMKDLGEAQFVLGIEIIRNRKNKTLALSQASYIDKMLIRYKMQDSKKGLLPFRHGVHLSKEQSPKTPQEV
Query: EDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDY-MLMYGVKDLILIGYTDSDFQTDVDSRKSTSGSVFTLNG
+ + S VG+L Y L TRPDI YAV IV + P A + +K +L+Y++ T + + ++ L + + DSD+ +R+ST+G L
Subjt: EDMKHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGRAHWTAVKNILKYLRRTRDY-MLMYGVKDLILIGYTDSDFQTDVDSRKSTSGSVFTLNG
Query: GAIIWRSIKQGCIADSTMEAEYVVACEAAKESVW
I W + +Q ++ S+ E EY A E W
Subjt: GAIIWRSIKQGCIADSTMEAEYVVACEAAKESVW
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