; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G023640 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G023640
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCCHC-type domain-containing protein
Genome locationCmo_Chr04:17650231..17650614
RNA-Seq ExpressionCmoCh04G023640
SyntenyCmoCh04G023640
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR025314 - Domain of unknown function DUF4219


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023729348.1 uncharacterized protein LOC111877030 [Lactuca sativa]4.7e-5382.11Show/hide
Query:  MGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPEDDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLMLFSKK
        MGD Q++GGIKKLNNNNY TW TCM SY+QGQDLWE+VGG ETT PE+D NGAL KW+IKAGK MF++KTTI EEMLEHI D+ TPKEAWDTFLMLFSKK
Subjt:  MGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPEDDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLMLFSKK

Query:  NDTRLQLLENELLSITQRDMTIA
        NDTRLQLLENELLSI+QRDMTIA
Subjt:  NDTRLQLLENELLSITQRDMTIA

XP_023746410.1 uncharacterized protein LOC111894574 [Lactuca sativa]1.4e-5282.11Show/hide
Query:  MGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPEDDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLMLFSKK
        MGD Q++GGIKKLNNNNY TW TCM SYLQGQDLWE+VGG ETT PE+D NGAL KW+IKAGK MFA+KTTI EEMLEHI D+ TPKEAWDTF+ LFSKK
Subjt:  MGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPEDDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLMLFSKK

Query:  NDTRLQLLENELLSITQRDMTIA
        NDTRLQLLENELLSI+QRDMTIA
Subjt:  NDTRLQLLENELLSITQRDMTIA

XP_023749568.1 uncharacterized protein LOC111897860 [Lactuca sativa]1.4e-5282.11Show/hide
Query:  MGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPEDDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLMLFSKK
        MGD Q++GGIKKLNNNNY TW TCM SYLQGQDLWE+VGG ETT PE+D NGAL KW+IKAGK MFA+KTTI EEMLEHI D+ TPKEAWDTF+ LFSKK
Subjt:  MGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPEDDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLMLFSKK

Query:  NDTRLQLLENELLSITQRDMTIA
        NDTRLQLLENELLSI+QRDMTIA
Subjt:  NDTRLQLLENELLSITQRDMTIA

XP_023758851.1 uncharacterized protein LOC111907314 [Lactuca sativa]1.4e-5282.11Show/hide
Query:  MGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPEDDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLMLFSKK
        MGD Q++GGIKKLNNNNY TW TCM SYLQGQDLWE+VGG ETT PE+D NGAL KW+IKAGK MFA+KTTI EEMLEHI D+ TPKEAWDTF+ LFSKK
Subjt:  MGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPEDDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLMLFSKK

Query:  NDTRLQLLENELLSITQRDMTIA
        NDTRLQLLENELLSI+QRDMTIA
Subjt:  NDTRLQLLENELLSITQRDMTIA

XP_023761520.1 uncharacterized protein LOC111909959 [Lactuca sativa]3.0e-5282.93Show/hide
Query:  MGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPEDDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLMLFSKK
        MGD Q+IGGIKKLNNNNY TW TCM SYLQGQDLWE+VGG ETT PE+D NGAL KW+IKAGK MFA+KTTI EEMLEHI D+ T KEAWDTF+MLFSKK
Subjt:  MGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPEDDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLMLFSKK

Query:  NDTRLQLLENELLSITQRDMTIA
        NDTRLQLLENELLSI+QRDMTIA
Subjt:  NDTRLQLLENELLSITQRDMTIA

TrEMBL top hitse value%identityAlignment
A0A2N9EU58 L-ascorbate oxidase6.8e-5076.56Show/hide
Query:  MANTMGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPE-DDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLM
        + +TMGD Q++GGIKKLNN NYNTWATC+ SYLQGQDLWE+VGG E T P  +D++G L KW+IKAGK MFA+KTTI EEMLEHI D KTPKEAWDTF  
Subjt:  MANTMGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPE-DDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLM

Query:  LFSKKNDTRLQLLENELLSITQRDMTIA
        LFSKKNDTRLQLLENELLS+ QRDMTIA
Subjt:  LFSKKNDTRLQLLENELLSITQRDMTIA

A0A2N9EVT7 CCHC-type domain-containing protein4.0e-5076.56Show/hide
Query:  MANTMGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPE-DDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLM
        + +TMGD Q++GGIKKLNN NYNTWATC+ SYLQGQDLWE+VGG E T P  +D++G L KW+IKAGK MFA+KTTI EEMLEHI D KTPKEAWDTF+ 
Subjt:  MANTMGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPE-DDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLM

Query:  LFSKKNDTRLQLLENELLSITQRDMTIA
        LFSKKNDTRLQLLENELLS+ QRDMTIA
Subjt:  LFSKKNDTRLQLLENELLSITQRDMTIA

A0A2N9EYD8 Uncharacterized protein4.0e-5076.56Show/hide
Query:  MANTMGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPE-DDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLM
        + +TMGD Q++GGIKKLNN NYNTWATC+ SYLQGQDLWE+VGG E T P  +D++G L KW+IKAGK MFA+KTTI EEMLEHI D KTPKEAWDTF+ 
Subjt:  MANTMGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPE-DDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLM

Query:  LFSKKNDTRLQLLENELLSITQRDMTIA
        LFSKKNDTRLQLLENELLS+ QRDMTIA
Subjt:  LFSKKNDTRLQLLENELLSITQRDMTIA

A0A2N9HXV3 Uncharacterized protein4.0e-5076.56Show/hide
Query:  MANTMGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPE-DDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLM
        + +TMGD Q++GGIKKLNN NYNTWATC+ SYLQGQDLWE+VGG E T P  +D++G L KW+IKAGK MFA+KTTI EEMLEHI D KTPKEAWDTF+ 
Subjt:  MANTMGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPE-DDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLM

Query:  LFSKKNDTRLQLLENELLSITQRDMTIA
        LFSKKNDTRLQLLENELLS+ QRDMTIA
Subjt:  LFSKKNDTRLQLLENELLSITQRDMTIA

A0A2N9I986 CCHC-type domain-containing protein4.0e-5076.56Show/hide
Query:  MANTMGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPE-DDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLM
        + +TMGD Q++GGIKKLNN NYNTWATC+ SYLQGQDLWE+VGG E T P  +D++G L KW+IKAGK MFA+KTTI EEMLEHI D KTPKEAWDTF+ 
Subjt:  MANTMGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPE-DDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLM

Query:  LFSKKNDTRLQLLENELLSITQRDMTIA
        LFSKKNDTRLQLLENELLS+ QRDMTIA
Subjt:  LFSKKNDTRLQLLENELLSITQRDMTIA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACACGATGGGTGATTTCCAAATCATTGGAGGAATTAAGAAACTCAACAACAACAACTACAACACGTGGGCAACATGCATGATGTCCTATTTACAAGGACAGGA
TCTTTGGGAGATCGTTGGCGGGTGCGAAACTACGTCGCCAGAGGATGATTCCAACGGCGCCTTGAGCAAATGGAGAATCAAAGCAGGAAAAGTAATGTTTGCCATGAAGA
CCACAATCGGAGAAGAGATGTTAGAACATATTTGGGATGACAAGACACCGAAAGAAGCATGGGACACGTTCTTGATGTTGTTCTCAAAGAAGAACGATACGAGGCTACAA
CTTCTGGAGAATGAGTTGTTGTCAATTACACAACGTGACATGACGATTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACACGATGGGTGATTTCCAAATCATTGGAGGAATTAAGAAACTCAACAACAACAACTACAACACGTGGGCAACATGCATGATGTCCTATTTACAAGGACAGGA
TCTTTGGGAGATCGTTGGCGGGTGCGAAACTACGTCGCCAGAGGATGATTCCAACGGCGCCTTGAGCAAATGGAGAATCAAAGCAGGAAAAGTAATGTTTGCCATGAAGA
CCACAATCGGAGAAGAGATGTTAGAACATATTTGGGATGACAAGACACCGAAAGAAGCATGGGACACGTTCTTGATGTTGTTCTCAAAGAAGAACGATACGAGGCTACAA
CTTCTGGAGAATGAGTTGTTGTCAATTACACAACGTGACATGACGATTGCTTAG
Protein sequenceShow/hide protein sequence
MANTMGDFQIIGGIKKLNNNNYNTWATCMMSYLQGQDLWEIVGGCETTSPEDDSNGALSKWRIKAGKVMFAMKTTIGEEMLEHIWDDKTPKEAWDTFLMLFSKKNDTRLQ
LLENELLSITQRDMTIA