CuGenDBv2

Gene ID	CmoCh04G023880
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Voltage-dependent L-type calcium channel subunit
Genome location	Cmo_Chr04:17793347..17797026
RNA-Seq Expression	CmoCh04G023880
Synteny	CmoCh04G023880
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6602021.1 hypothetical protein SDJN03_07254, partial [Cucurbita argyrosperma subsp. sororia]

4.8e-102

87.25

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Query:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAEKYDSDDRNGTVPV+EQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGP+VEKACRNIGRDVLCWTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
        S                            VGTIALLALTGLLIFLLFFLAATFNA+VISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
Subjt:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA

Query:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD
        IVAVVIAAGWIGFFCVVWLA+RKSFGIAKQSMSAGSSAISAFSHARRAHKD
Subjt:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD

XP_022922733.1 uncharacterized protein LOC111430635 [Cucurbita moschata]

2.0e-103

88.84

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Query:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
        S                            VGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
Subjt:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA

Query:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD
        IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD
Subjt:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD

XP_022990837.1 uncharacterized protein LOC111487608 [Cucurbita maxima]

2.5e-98

85.26

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Query:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAEKYDSDDRNGTVPVDEQ+RTSHKSKG+++ D+TVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIG DVLCWTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
        S                            VGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
Subjt:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA

Query:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD
        IVAVVIAAGWIGFFCVVWLA+RKSFGIAKQSMSAGSS ISAFSHARRAHKD
Subjt:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD

XP_023514904.1 uncharacterized protein LOC111779077 [Cucurbita pepo subsp. pepo]

4.8e-102

87.65

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Query:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAEKYDSDDRNGTVPV+EQDRTSHKSKGVYNMD+TVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
        S                            VGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
Subjt:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA

Query:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD
        IVAVVIAAGWIGFFCVVWLA+RKSFGIAKQSMSAGSSAISAFSHARRAHKD
Subjt:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD

XP_038906498.1 uncharacterized protein LOC120092475 [Benincasa hispida]

8.5e-83

72.51

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Query:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAE YDSDDRN T PV+E+D +SH+SKGV   D TVYE LRRLI E+F PD+ KGSSLFQRVKVS+ ENGPAV +ACRN GRDVLCWTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
        S                            VGTI LLALTG LIFLLFFLAAT NA++ISLLVSLAAVGGFLALFFAC+TA+YIGAL VALFVISTATISA
Subjt:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA

Query:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD
        IV VVIAAGW+GFFCVVWLA+RKSFG+AK+S++A +SAISAFS+ARRAHKD
Subjt:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KNC3 Uncharacterized protein

3.3e-80

71.31

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Query:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAE +DSDDRN TVPV+E+D +SH+SKGV   D+TVYE LRRLIAE+F PD+ KG SLF RVKVS+T+NGPAV +ACRN GRDVL WTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
        S                            VGTI LLA+TG LIFL FFLAAT NA++ISLLVSLAAVGGFLALFFAC+TA+Y+GAL VALFVISTATISA
Subjt:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA

Query:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD
        IVAVVIAAGWIGFFC+VWLA+RKSFG+AK+S+SA +SAISAFS+ARRAHKD
Subjt:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD

A0A5A7V6K3 Uncharacterized protein

1.9e-75

69.32

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Query:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAE +DSD RN TVPV+E+D +SH+SKG+   D+TVYE LRRLIAE+F PD+ KG SLF RVKVS+ +NGPAV +ACRN G DVL WTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
        S                            VGTI LLA+TG LIFLLFFLAAT NA++ISLLVSLAAVGGFLALFFAC+TA+Y+GAL VALFVISTATISA
Subjt:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA

Query:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD
        IVAVVIAAGWIGFF +VWLA+ KSFG+AK+S+SA +SAISAFS+ARRAHKD
Subjt:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD

A0A6J1CIE7 uncharacterized protein LOC111011773

1.7e-81

71.71

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Query:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI
        M E YDSDDRNG V V+E+D  S+ SKGV + D+TVYE LRRLIAE+F PD+ KG+SLF RVK+S+ ENGPAV +ACRN+GRDVL WTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
        S                            VGTIALLALTGLLIFLLFFLAAT NA++ISLLVSLAAVGGFLALFFAC+TAVYIGALTVA+FVISTAT SA
Subjt:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA

Query:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD
        IVAV++A GWIGFFCVVWLA+R+SFG AKQS+SA SSAISAFS+ARRAHKD
Subjt:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD

A0A6J1E7P4 uncharacterized protein LOC111430635

9.5e-104

88.84

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Query:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
        S                            VGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
Subjt:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA

Query:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD
        IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD
Subjt:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD

A0A6J1JJZ4 uncharacterized protein LOC111487608

1.2e-98

85.26

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Query:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI
        MAEKYDSDDRNGTVPVDEQ+RTSHKSKG+++ D+TVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIG DVLCWTRRGSPLRALLVI
Subjt:  MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVI

Query:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
        S                            VGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA
Subjt:  SVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISA

Query:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD
        IVAVVIAAGWIGFFCVVWLA+RKSFGIAKQSMSAGSS ISAFSHARRAHKD
Subjt:  IVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G16550.1 unknown protein

1.0e-41

48.64

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Query:  RTVYETLRRLIAEVFSPDKAKG--SSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVFEMLSVQYLMVG
        +++Y  +   I  +  PD   G  SS  +RV+ S+ ENGP + +A    GR++L WTRRGS LRALLVI+                            +G
Subjt:  RTVYETLRRLIAEVFSPDKAKG--SSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVFEMLSVQYLMVG

Query:  TIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQS
        TI LL    L++F LFF+AAT NA++ISLL+SLA  GGFLALFF C+T VYIGAL+VA FVISTAT+SA+V+V+IA+GWIGFF  VWL  R S  +AKQS
Subjt:  TIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQS

Query:  MSAGSSAISAFSHARRAHKD
        +S   SAIS  + +R  H+D
Subjt:  MSAGSSAISAFSHARRAHKD

Sequences

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CDS sequence

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mRNA sequence

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ATGGCGGAGAAGTACGATTCCGATGATCGGAATGGCACCGTGCCGGTTGACGAACAAGATAGAACCAGTCACAAGTCCAAAGGAGTGTATAATATGGATCGGACAGTTTA
TGAAACCCTCCGCCGTCTGATCGCTGAGGTTTTCTCCCCCGATAAAGCTAAGGGTTCTTCATTGTTCCAGCGCGTTAAGGTCTCCATCACTGAGAATGGCCCTGCCGTTG
AAAAGGCCTGCAGAAACATTGGTCGCGATGTTCTTTGCTGGACTCGCAGGGGCAGTCCTCTTAGAGCACTCCTTGTTATCTCCGTGAGTATTACTGATAATTCCAAAACT
GGTGGTTGTCTGGACTTGTTTATTGTGTTTGAAATGCTTTCTGTTCAGTACTTAATGGTTGGGACAATTGCTCTTCTTGCATTGACGGGATTGCTCATCTTTCTGCTATT
CTTTCTGGCAGCAACTTTCAACGCCGTTGTTATTTCTCTTCTTGTTTCCTTGGCTGCAGTTGGAGGCTTCTTGGCACTTTTCTTTGCTTGCATAACGGCTGTTTACATCG
GAGCATTAACAGTTGCTTTGTTTGTTATATCCACTGCAACAATCTCAGCAATTGTGGCAGTGGTGATTGCCGCAGGTTGGATTGGATTCTTCTGTGTGGTATGGCTAGCA
ATGCGAAAAAGTTTTGGTATTGCTAAGCAGTCGATGAGCGCGGGCAGTTCAGCAATTTCAGCATTTTCTCATGCTAGACGTGCCCACAAAGATTAGGTATGTTTTTAGAT
GAGTTAAGTGAATGCTTTGAACTGGTGTATGTTATTGCTTCACACGTGTTTTCCCCTATTGAGAGTTACGTTTTGGAGGATCTGCTGCATATGTTGTGTTGACTTTGAAG
TTGTTCTAGGTAGTGAAACCATAACATGTATTTGTAATGTAAATATTCTGTTAAATGTGTTGAGTCATACAATATAGTCCTACTATTTTATGGGTTCCTTTATTGGTGAT
GAAAGTATCTAGATTGAAGATAGAACTTCCCAGAACTGTCATAATCTAAGTAATATTTTGGCTTTAAGTTACTGCTATGTACTGTAATTGTGAAAATTTACAAGGATTTA
AATTTGAAGTGTTCAATGAGGTGATGACTGATTGAATGAATTTGGATTTATGAAGTTCAAGGTTAGAAACAT

Protein sequence

Show/hide protein sequence

MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKT
GGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLA
MRKSFGIAKQSMSAGSSAISAFSHARRAHKD

CmoCh04G023880 (gene) of Cucurbita moschata (Rifu) v1 genome