CuGenDBv2

Gene ID	CmoCh04G024090
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Rx_N domain-containing protein
Genome location	Cmo_Chr04:17934424..17934960
RNA-Seq Expression	CmoCh04G024090
Synteny	CmoCh04G024090
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6602042.1 hypothetical protein SDJN03_07275, partial [Cucurbita argyrosperma subsp. sororia]

6.5e-93

96.07

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Query:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA
        MPLPSFS N FPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRP+SVPKPSRYRLEAIRIAQ FFQDNSQTPCLHNSLLDSYEVA
Subjt:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA

Query:  SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT
        SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVA+GSLVR PGKQQ RPT
Subjt:  SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT

KAG7032736.1 hypothetical protein SDJN02_06786, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-92

95.51

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Query:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA
        MPLPSFS N FPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRP+SVPKPSRYRLEAIRIAQ FFQDNSQTPCLHNSLLDSYEVA
Subjt:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA

Query:  SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT
        SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRS+MCGKIEDVA+GSLVR PGKQQ RPT
Subjt:  SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT

XP_022959523.1 uncharacterized protein LOC111460520 [Cucurbita moschata]

5.6e-97

100

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Query:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA
        MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA
Subjt:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA

Query:  SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT
        SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT
Subjt:  SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT

XP_022990803.1 uncharacterized protein LOC111487585 [Cucurbita maxima]

2.7e-91

95.51

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Query:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA
        MPLPSFSFN F DRK+PTPTQPT+AADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTF QDNSQTPCLHNSLLDSYEVA
Subjt:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA

Query:  SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT
        SISR ISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFG FWRRRSVMCGKIEDVAIGSLVRSPGKQQ RPT
Subjt:  SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT

XP_023541987.1 uncharacterized protein LOC111801939 [Cucurbita pepo subsp. pepo]

2.9e-93

96.63

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Query:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA
        MPLPSFSFN FPDRK+PTPTQPT+AADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQ FFQDNSQTPCLHNSLLDSYEVA
Subjt:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA

Query:  SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT
        SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFG FWRRRSVMCGKIEDVAIGSLVR PGKQQQRPT
Subjt:  SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KTL9 Uncharacterized protein

2.4e-61

72.09

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Query:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQ--TFFQDNSQTPCLH-NSLLDSY
        MP PS S N FPDRKNPTPT+PT A DDLAA KAAAWAWY HGSGSESKPMREFGLTRP++VPKPSRYRLEA   +      QD  QTP  H NSLLDSY
Subjt:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQ--TFFQDNSQTPCLH-NSLLDSY

Query:  EVASISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRR----SVMCGKIEDVAIGS
        E+ASISRR+SDLLDP DRNNFSLRSFESEI+DLGR+IE K+TKP KF   WR R    S+MCGK+EDV + +
Subjt:  EVASISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRR----SVMCGKIEDVAIGS

A0A1S4E2U9 uncharacterized protein LOC103499304

2.5e-58

70.18

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Query:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAI-RIAQTFFQDNSQTPCLH-NSLLDSYE
        MP PSFS N FPDR  PTPT+ T A D+LAA KAAAWAWY HGSGSESKPMREFGLTRP+SVPKPSRYRLEA  R      +DN QTP  + NSLLDSYE
Subjt:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAI-RIAQTFFQDNSQTPCLH-NSLLDSYE

Query:  VASISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFW----RRRSVMCGKIEDVAIGS
        +ASISRR+SDLLDP DRNNFSLRSFESEI+DLGR+IE K+TK  KF   W    R+ S+MCGK+EDV + +
Subjt:  VASISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFW----RRRSVMCGKIEDVAIGS

A0A5D3DS63 Uncharacterized protein

2.5e-58

70.18

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Query:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAI-RIAQTFFQDNSQTPCLH-NSLLDSYE
        MP PSFS N FPDR  PTPT+ T A D+LAA KAAAWAWY HGSGSESKPMREFGLTRP+SVPKPSRYRLEA  R      +DN QTP  + NSLLDSYE
Subjt:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAI-RIAQTFFQDNSQTPCLH-NSLLDSYE

Query:  VASISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFW----RRRSVMCGKIEDVAIGS
        +ASISRR+SDLLDP DRNNFSLRSFESEI+DLGR+IE K+TK  KF   W    R+ S+MCGK+EDV + +
Subjt:  VASISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFW----RRRSVMCGKIEDVAIGS

A0A6J1H668 uncharacterized protein LOC111460520

2.7e-97

100

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Query:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA
        MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA
Subjt:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA

Query:  SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT
        SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT
Subjt:  SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT

A0A6J1JUC6 uncharacterized protein LOC111487585

1.3e-91

95.51

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Query:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA
        MPLPSFSFN F DRK+PTPTQPT+AADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTF QDNSQTPCLHNSLLDSYEVA
Subjt:  MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVA

Query:  SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT
        SISR ISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFG FWRRRSVMCGKIEDVAIGSLVRSPGKQQ RPT
Subjt:  SISRRISDLLDPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G66190.1 unknown protein

7.3e-10

36.89

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Query:  DDLAAEKAAAWAWYHHGSGSESKP-MREFGLTRPVSVPKPSRYRLEAIR---------------------IAQTFFQDNSQTPCLHNSLLDSYEVASISR
        DDLA  KAAAWAWY      E KP MREF +TR   +P+PSRY++EA +                     +  T +Q        ++ LLD+YE  +IS+
Subjt:  DDLAAEKAAAWAWYHHGSGSESKP-MREFGLTRPVSVPKPSRYRLEAIR---------------------IAQTFFQDNSQTPCLHNSLLDSYEVASISR

Query:  RIS
        R++
Subjt:  RIS

AT5G37550.1 unknown protein

9.2e-13

33.33

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Query:  DDLAAEKAAAWAWYHHGSGSESKP-MREFGLT-RPVSVPKPSRYRLEAIRI------------AQTFFQDNSQTPCLHNSLLDSYEVASISRRISDLLDP
        D+LA  KAAAWAWY      E KP MREF L+ R +  P+PSRY+LEA +             +  F + + +T    +SLLDSYE+ SIS+RI +   P
Subjt:  DDLAAEKAAAWAWYHHGSGSESKP-MREFGLT-RPVSVPKPSRYRLEAIRI------------AQTFFQDNSQTPCLHNSLLDSYEVASISRRISDLLDP

Query:  T-----DRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVM-----CGKIEDVAIGSLVR-SPGKQQQRPT
        T     D       +   + L+   + E    K       W+   +M     CG+ +DV +G+  R  P  ++  PT
Subjt:  T-----DRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVM-----CGKIEDVAIGSLVR-SPGKQQQRPT

Sequences

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CDS sequence

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ATGCCATTACCATCCTTCTCCTTCAACCACTTCCCCGACCGGAAGAACCCAACGCCGACACAACCCACCCTCGCCGCCGACGACTTAGCGGCGGAGAAGGCGGCGGCCTG
GGCATGGTACCATCATGGGTCCGGCTCCGAATCCAAGCCCATGCGGGAATTCGGCCTCACCAGGCCCGTCTCTGTCCCCAAGCCCTCTCGCTACAGGCTCGAGGCCATAA
GAATCGCCCAAACTTTCTTTCAGGACAATTCACAAACACCTTGTCTGCACAATTCTCTTCTCGACAGCTACGAAGTCGCGAGCATTTCTAGGCGCATATCTGACTTATTA
GACCCCACTGATCGTAACAATTTTAGCCTTAGGAGCTTCGAATCTGAAATTTTGGATCTGGGTCGAGAAATTGAGAGGAAATCCACCAAGCCCAAGAAATTTGGAGCTTT
CTGGCGCAGACGGTCGGTGATGTGCGGAAAAATTGAGGATGTGGCTATTGGCAGCCTCGTCCGGTCGCCGGGAAAACAACAGCAAAGGCCGACGTGA

mRNA sequence

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Protein sequence

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MPLPSFSFNHFPDRKNPTPTQPTLAADDLAAEKAAAWAWYHHGSGSESKPMREFGLTRPVSVPKPSRYRLEAIRIAQTFFQDNSQTPCLHNSLLDSYEVASISRRISDLL
DPTDRNNFSLRSFESEILDLGREIERKSTKPKKFGAFWRRRSVMCGKIEDVAIGSLVRSPGKQQQRPT

CmoCh04G024090 (gene) of Cucurbita moschata (Rifu) v1 genome