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CmoCh04G024100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G024100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncentromere protein V-like
Genome locationCmo_Chr04:17936113..17936604
RNA-Seq ExpressionCmoCh04G024100
SyntenyCmoCh04G024100
Gene Ontology termsGO:0016846 - carbon-sulfur lyase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006913 - CENP-V/GFA domain
IPR011057 - Mss4-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062377.1 centromere protein V isoform X5 [Cucumis melo var. makuwa]8.9e-5779.03Show/hide
Query:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        +  KMV+H GGCHCKR+RWEVEAA+SV AW+CNCS+C MRGNTHFTVP+  F LLGDS  F+STYTFGTH A HTFCKVCGITSFYHSRSTPDGVSV+FR
Subjt:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGKNWEAAH
        CVDPGTL HV+I KFDG+NWE AH
Subjt:  CVDPGTLAHVEIKKFDGKNWEAAH

KAG6602043.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. sororia]5.8e-6495Show/hide
Query:  ISVNQQTMGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPD
        +SV+Q+TM  KMVIHKGGCHCKR+RWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPD
Subjt:  ISVNQQTMGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPD

Query:  GVSVTFRCVDPGTLAHVEIK
        GVSVTFRCVDPGTLAHVEIK
Subjt:  GVSVTFRCVDPGTLAHVEIK

KAG7032737.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-6995.31Show/hide
Query:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        M  KMVIHKGGCHCKR+RWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
Subjt:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGKNWEAAHRRQR
        CVDPGTLAHVEIKKFDG+NWEAAHRR++
Subjt:  CVDPGTLAHVEIKKFDGKNWEAAHRRQR

XP_022999779.1 centromere protein V-like [Cucurbita maxima]4.1e-5475Show/hide
Query:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        M S++V+H GGCHCK+VRW VEA ASV AW+CNCSDC MR NTHF VP  RFKLLGDS  F+STYTFGTH A HTFCKVCGITSFYH RS PDGV++TF+
Subjt:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGKNWEAAH
        CVDPGTLA+VEI++FDG NWEA++
Subjt:  CVDPGTLAHVEIKKFDGKNWEAAH

XP_038884393.1 centromere protein V [Benincasa hispida]3.2e-5474.19Show/hide
Query:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        M S++V+H GGCHCK+VRW+VEA ASV AW+CNCS+C MR NTHF VP  RFKLLGDS  F+STYTFG+H A HTFCKVCGITSFYH RS PDGV++TF+
Subjt:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGKNWEAAH
        CVDPGTL HVEI+KFDG NWEA++
Subjt:  CVDPGTLAHVEIKKFDGKNWEAAH

TrEMBL top hitse value%identityAlignment
A0A059BUT9 CENP-V/GFA domain-containing protein2.2e-5372.58Show/hide
Query:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        M S++++H GGCHC+RVRWEVEA  SV AW+CNCSDC MRGN HF VP+ RFKLLG+SD++++TYTFGTH A HTFCKVCGITSFY  RS PDG++VT+R
Subjt:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGKNWEAAH
        CVDPGTLAHVEIK+FDG+NWE+++
Subjt:  CVDPGTLAHVEIKKFDGKNWEAAH

A0A0A0KN47 CENP-V/GFA domain-containing protein1.5e-5779.84Show/hide
Query:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        +  +MV+H GGCHCKR+RWEVEAA+SV AW+CNCS+C MRGNTHFTVP+  FKLLGDSD F+STYTFGTH A HTFCKVCGITSFYHSRSTPDGVSV+FR
Subjt:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGKNWEAAH
        CVDPGTL HV+I KFDG NWE AH
Subjt:  CVDPGTLAHVEIKKFDGKNWEAAH

A0A5A7V607 Centromere protein V isoform X54.3e-5779.03Show/hide
Query:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        +  KMV+H GGCHCKR+RWEVEAA+SV AW+CNCS+C MRGNTHFTVP+  F LLGDS  F+STYTFGTH A HTFCKVCGITSFYHSRSTPDGVSV+FR
Subjt:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGKNWEAAH
        CVDPGTL HV+I KFDG+NWE AH
Subjt:  CVDPGTLAHVEIKKFDGKNWEAAH

A0A6J1G4E1 centromere protein V-like5.8e-5474.19Show/hide
Query:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        M S++V+H GGCHCK VRW VEA  SV AW+CNCSDC MR NTHF VP  RFKLLGDS  F+STYTFGTH A HTFCKVCGITSFYH RS PDGV++TF+
Subjt:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGKNWEAAH
        CVDPGTL HVEI++FDG NWEA++
Subjt:  CVDPGTLAHVEIKKFDGKNWEAAH

A0A6J1KE30 centromere protein V-like2.0e-5475Show/hide
Query:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        M S++V+H GGCHCK+VRW VEA ASV AW+CNCSDC MR NTHF VP  RFKLLGDS  F+STYTFGTH A HTFCKVCGITSFYH RS PDGV++TF+
Subjt:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGKNWEAAH
        CVDPGTLA+VEI++FDG NWEA++
Subjt:  CVDPGTLAHVEIKKFDGKNWEAAH

SwissProt top hitse value%identityAlignment
A0A0U1RR11 Centromere protein V-like protein 11.7e-1841.59Show/hide
Query:  MVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP
        +V H GGCHC  VR+ V A A +   +C+C  C  + + HF VPA+RF LL  ++  V TY   TH A H+FC  CG+ SF+ + S P    V   C+D 
Subjt:  MVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVEIKKFDG
        GT+  V I++  G
Subjt:  GTLAHVEIKKFDG

A0A0U1RRI6 Centromere protein V-like protein 31.7e-1841.59Show/hide
Query:  MVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP
        +V H GGCHC  VR+ V A A +   +C+C  C  + + HF VPA+RF LL  ++  V TY   TH A H+FC  CG+ SF+ + S P    V   C+D 
Subjt:  MVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVEIKKFDG
        GT+  V I++  G
Subjt:  GTLAHVEIKKFDG

P0DPI3 Centromere protein V-like protein 21.7e-1841.59Show/hide
Query:  MVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP
        +V H GGCHC  VR+ V A A +   +C+C  C  + + HF VPA+RF LL  ++  V TY   TH A H+FC  CG+ SF+ + S P    V   C+D 
Subjt:  MVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVEIKKFDG
        GT+  V I++  G
Subjt:  GTLAHVEIKKFDG

Q7Z7K6 Centromere protein V5.7e-3047.2Show/hide
Query:  MVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP
        +V H GGCHC  VR+EV A+A +  ++CNCS C  + N HF VPA+RFKLL  ++  ++TYTF TH A HTFCK CG+ SFY  RS P G  +   C+D 
Subjt:  MVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVEIKKFDGKNWEAAHRRQRS
        GT+  +  ++F+G +WE A +  ++
Subjt:  GTLAHVEIKKFDGKNWEAAHRRQRS

Q9CXS4 Centromere protein V1.5e-3048Show/hide
Query:  MVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP
        +V H GGCHC  VR+EV A+A +  ++CNCS C  + N HF VPA+RFKLL  ++  ++TYTF TH A HTFCK CG+ SFY  RS P G  +   C+D 
Subjt:  MVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDP

Query:  GTLAHVEIKKFDGKNWEAAHRRQRS
        GT+  V  ++F+G +WE A +  ++
Subjt:  GTLAHVEIKKFDGKNWEAAHRRQRS

Arabidopsis top hitse value%identityAlignment
AT5G16940.1 carbon-sulfur lyases4.6e-5163.49Show/hide
Query:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        M S+++ H+GGCHC +++W V+AA SV AW CNCSDC MRGN HF VP++ F+LL DS  F++TYTFGTH A HTFCKVCGITSFY  RS PDGV+VT +
Subjt:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGKNWEAAHRR
        CV  GTLAH+E+K +DG+NWE +H++
Subjt:  CVDPGTLAHVEIKKFDGKNWEAAHRR

AT5G16940.2 carbon-sulfur lyases4.6e-5163.49Show/hide
Query:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR
        M S+++ H+GGCHC +++W V+AA SV AW CNCSDC MRGN HF VP++ F+LL DS  F++TYTFGTH A HTFCKVCGITSFY  RS PDGV+VT +
Subjt:  MGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFR

Query:  CVDPGTLAHVEIKKFDGKNWEAAHRR
        CV  GTLAH+E+K +DG+NWE +H++
Subjt:  CVDPGTLAHVEIKKFDGKNWEAAHRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGAAACACTCCACGAAGCAATTTAATGTCACCTCACCTGTCACGAGTTTTTGTCCATATAAACCATGGGATAAGATCAGTGTTAATCAACAAACAATGGGTTC
CAAGATGGTAATACACAAAGGCGGCTGCCACTGCAAGAGAGTAAGATGGGAGGTGGAAGCAGCGGCCAGTGTGACAGCTTGGGAGTGCAATTGTTCGGACTGCTGCATGA
GAGGCAACACCCATTTCACTGTGCCGGCTGCAAGGTTCAAGCTTTTAGGAGACTCCGACAAGTTCGTTTCCACCTACACTTTTGGGACCCATATTGCCAACCACACGTTT
TGCAAAGTTTGTGGGATCACTTCCTTTTACCATTCGCGATCAACCCCAGATGGGGTTTCGGTTACTTTTAGATGTGTTGATCCTGGGACGTTGGCCCATGTTGAGATTAA
GAAGTTTGATGGCAAAAATTGGGAGGCAGCTCATCGTCGTCAACGATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGAAACACTCCACGAAGCAATTTAATGTCACCTCACCTGTCACGAGTTTTTGTCCATATAAACCATGGGATAAGATCAGTGTTAATCAACAAACAATGGGTTC
CAAGATGGTAATACACAAAGGCGGCTGCCACTGCAAGAGAGTAAGATGGGAGGTGGAAGCAGCGGCCAGTGTGACAGCTTGGGAGTGCAATTGTTCGGACTGCTGCATGA
GAGGCAACACCCATTTCACTGTGCCGGCTGCAAGGTTCAAGCTTTTAGGAGACTCCGACAAGTTCGTTTCCACCTACACTTTTGGGACCCATATTGCCAACCACACGTTT
TGCAAAGTTTGTGGGATCACTTCCTTTTACCATTCGCGATCAACCCCAGATGGGGTTTCGGTTACTTTTAGATGTGTTGATCCTGGGACGTTGGCCCATGTTGAGATTAA
GAAGTTTGATGGCAAAAATTGGGAGGCAGCTCATCGTCGTCAACGATCATGA
Protein sequenceShow/hide protein sequence
MGWKHSTKQFNVTSPVTSFCPYKPWDKISVNQQTMGSKMVIHKGGCHCKRVRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTF
CKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGKNWEAAHRRQRS