; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G024200 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G024200
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDFRP_C domain-containing protein
Genome locationCmo_Chr04:17972986..17975289
RNA-Seq ExpressionCmoCh04G024200
SyntenyCmoCh04G024200
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005829 - cytosol (cellular component)
InterPro domainsIPR032378 - ZC3H15/TMA46 family, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011655210.1 zinc finger CCCH domain-containing protein 15 homolog [Cucumis sativus]3.5e-2485.14Show/hide
Query:  MGAEEAVVEREK-LSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
        MGAEEA +E+EK LSSH+P   PITEAQFLSWKR KDAEASAKR+ETARKRAEDIA GAVQMNGRELFLHQPWV
Subjt:  MGAEEAVVEREK-LSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
XP_022141384.1 zinc finger CCCH domain-containing protein 15 homolog [Momordica charantia]1.1e-2585.33Show/hide
Query:  MGAEE--AVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
        MGAEE  A +E+EKL+SH+P  NPITEAQFLSWKR KDAEASAKRDETARKRAEDIA+GAVQMNGRELFLHQPWV
Subjt:  MGAEE--AVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
XP_022939418.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata]1.2e-2483.56Show/hide
Query:  MGAEEAVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
        MGAEEA +E+EKL+S +P   PITE QFLSWKR KDAEASAKRDETARKRA+DIASGAVQMNGRELFLHQPWV
Subjt:  MGAEEAVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
XP_022963450.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata]1.3e-31100Show/hide
Query:  MGAEEAVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
        MGAEEAVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
Subjt:  MGAEEAVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
XP_022990599.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita maxima]2.5e-3095.89Show/hide
Query:  MGAEEAVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
        MGAEEA VE+EKL+SHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
Subjt:  MGAEEAVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
TrEMBL top hitse value%identityAlignment
A0A0A0KN87 DFRP_C domain-containing protein1.7e-2485.14Show/hide
Query:  MGAEEAVVEREK-LSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
        MGAEEA +E+EK LSSH+P   PITEAQFLSWKR KDAEASAKR+ETARKRAEDIA GAVQMNGRELFLHQPWV
Subjt:  MGAEEAVVEREK-LSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
A0A6J1CIH3 zinc finger CCCH domain-containing protein 15 homolog5.3e-2685.33Show/hide
Query:  MGAEE--AVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
        MGAEE  A +E+EKL+SH+P  NPITEAQFLSWKR KDAEASAKRDETARKRAEDIA+GAVQMNGRELFLHQPWV
Subjt:  MGAEE--AVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
A0A6J1FLL2 zinc finger CCCH domain-containing protein 15 homolog5.8e-2583.56Show/hide
Query:  MGAEEAVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
        MGAEEA +E+EKL+S +P   PITE QFLSWKR KDAEASAKRDETARKRA+DIASGAVQMNGRELFLHQPWV
Subjt:  MGAEEAVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
A0A6J1HI11 zinc finger CCCH domain-containing protein 15 homolog6.4e-32100Show/hide
Query:  MGAEEAVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
        MGAEEAVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
Subjt:  MGAEEAVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
A0A6J1JSG7 zinc finger CCCH domain-containing protein 15 homolog1.2e-3095.89Show/hide
Query:  MGAEEAVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
        MGAEEA VE+EKL+SHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
Subjt:  MGAEEAVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22140.1 unknown protein5.4e-1567.86Show/hide
Query:  PSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
        P+   I++ QFL+WKR KDAE  AK+ E ARKR EDIASG V MNGRELFLH+PWV
Subjt:  PSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWV
AT1G22140.2 unknown protein4.6e-0662.5Show/hide
Query:  PSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASG
        P+   I++ QFL+WKR KDAE  AK+ E ARKR EDIASG
Subjt:  PSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCAGAAGAAGCGGTTGTGGAGCGAGAGAAGCTCTCGTCTCATGATCCGAGCGCGAATCCCATCACGGAGGCTCAGTTCCTATCGTGGAAGCGCCACAAGGATGC
CGAGGCATCTGCTAAAAGAGATGAAACAGCAAGGAAGCGTGCGGAGGATATAGCCTCAGGAGCAGTGCAAATGAATGGGCGAGAGCTTTTCTTGCACCAACCGTGGGTCC
TTACATGA
mRNA sequenceShow/hide mRNA sequence
TAGTTTAAATTTTACACTCTCTCCATCTCGAATATAACAGAGGTTGAAGCAGCAATCCATTGGAGAGGGGCTATCAAATCCAGGAATCTGATCCACGCTCAACAAAATGG
GGGCAGAAGAAGCGGTTGTGGAGCGAGAGAAGCTCTCGTCTCATGATCCGAGCGCGAATCCCATCACGGAGGCTCAGTTCCTATCGTGGAAGCGCCACAAGGATGCCGAG
GCATCTGCTAAAAGAGATGAAACAGCAAGGAAGCGTGCGGAGGATATAGCCTCAGGAGCAGTGCAAATGAATGGGCGAGAGCTTTTCTTGCACCAACCGTGGGTCCTTAC
ATGATGAAATGTTTTTCATGTGGGAATAAAAATCATGATGTGTAGTGTCCATTGTTATAGGCGCTACTTTACTTAGTGCAATCATGCGTACCCAAGTGTAACGATTCGAT
TTTCTTTTGTAAACGTACTGGTCTAAGTTTAGCTTACTTATAAATTGTTTTGTAATTTAAAAACAAATGAAAGAATACCCATATATAGCAAAGTAAAATCATCTTCTAGA
TATCCATTTAAATGATTTTTAGAATGCTTGTAATTTAACTAAATAATTCAATAATGCAATTTTCAAT
Protein sequenceShow/hide protein sequence
MGAEEAVVEREKLSSHDPSANPITEAQFLSWKRHKDAEASAKRDETARKRAEDIASGAVQMNGRELFLHQPWVLT