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CmoCh04G024480 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G024480
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCrossover junction endodeoxyribonuclease RuvC
Genome locationCmo_Chr04:18140348..18144300
RNA-Seq ExpressionCmoCh04G024480
SyntenyCmoCh04G024480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER49216.1 alanine--tRNA ligase [Striga asiatica]2.1e-0957.14Show/hide
Query:  LQTLHCGIELQRLEEPLRPNEQAKVVQWNLKSSLPSAMHRGCFFESFMALALMESLYSSNFEM
        L T   G+   +L++PLRPNE  +VVQWN +SSLPSA  RGCFF   +ALALM S YSSN ++
Subjt:  LQTLHCGIELQRLEEPLRPNEQAKVVQWNLKSSLPSAMHRGCFFESFMALALMESLYSSNFEM

GER53332.1 crossover junction endodeoxyribonuclease RuvC [Striga asiatica]1.4e-0546.67Show/hide
Query:  SPPVASAATLNPFLIMLQTLHCGIELQRLEEPLRPNEQAKVVQWNLKSSLPSAMHRGCFFESFMALALMESLYSS
        +P ++S    NPF I+ QT H   ++QR++EP   + Q +VV  NL SSLPSA  RGCFF S +A    +S YSS
Subjt:  SPPVASAATLNPFLIMLQTLHCGIELQRLEEPLRPNEQAKVVQWNLKSSLPSAMHRGCFFESFMALALMESLYSS

TrEMBL top hitse value%identityAlignment
A0A2P2NGS7 Uncharacterized protein1.6e-1568.75Show/hide
Query:  TLNPFLIMLQTLHCGIELQRLEEPLRPNEQAKVVQWNLKSSLPSAMHRGCFFESFMALALMESL
        +L PFL+ML TL CGIEL +L++P RP+E A VVQWNL+SSLPSAM RGCF  S +ALALM SL
Subjt:  TLNPFLIMLQTLHCGIELQRLEEPLRPNEQAKVVQWNLKSSLPSAMHRGCFFESFMALALMESL

A0A5A7QW66 Alanine--tRNA ligase1.0e-0957.14Show/hide
Query:  LQTLHCGIELQRLEEPLRPNEQAKVVQWNLKSSLPSAMHRGCFFESFMALALMESLYSSNFEM
        L T   G+   +L++PLRPNE  +VVQWN +SSLPSA  RGCFF   +ALALM S YSSN ++
Subjt:  LQTLHCGIELQRLEEPLRPNEQAKVVQWNLKSSLPSAMHRGCFFESFMALALMESLYSSNFEM

A0A7C8YFV8 Uncharacterized protein8.1e-1567.69Show/hide
Query:  IMLQTLHCGIELQRLEEPLRPNEQAKVVQWNLKSSLPSAMHRGCFFESFMALALMESLYSSNFEM
        +ML TL CG+ELQRL+EP RP E  KVV WNL+SSLPSAMH  CFF SF+A  L++SLYSSN  M
Subjt:  IMLQTLHCGIELQRLEEPLRPNEQAKVVQWNLKSSLPSAMHRGCFFESFMALALMESLYSSNFEM

A0A7C9AMD1 Uncharacterized protein5.6e-0859.02Show/hide
Query:  MLQTLHCGIELQRLEEPLRPNEQAKVVQWNLKSSLPSAMHRGCFFESFMALALMESLYSSN
        M+QT   G EL RLEEP  P E  KVVQWNL SSLPSA H G F    +A +L +SL SSN
Subjt:  MLQTLHCGIELQRLEEPLRPNEQAKVVQWNLKSSLPSAMHRGCFFESFMALALMESLYSSN

A0A7C9APL8 Uncharacterized protein5.6e-0859.02Show/hide
Query:  MLQTLHCGIELQRLEEPLRPNEQAKVVQWNLKSSLPSAMHRGCFFESFMALALMESLYSSN
        M+QT   G EL RLEEP  P E  KVVQWNL SSLPSA H G F    +A +L +SL SSN
Subjt:  MLQTLHCGIELQRLEEPLRPNEQAKVVQWNLKSSLPSAMHRGCFFESFMALALMESLYSSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCGTCAAGAGCCATGGTGAAATTGAAGATTTCCAGCTTGAAACGTCCCCTCCAGTGGCCTCTGCCGCCACCTTGAACCCATTCTTGATTATGCTACAGACATT
GCATTGTGGTATTGAACTGCAGAGGTTGGAGGAGCCATTAAGGCCCAATGAGCAGGCCAAGGTGGTGCAGTGGAACCTTAAGAGTTCGTTGCCATCTGCTATGCATCGTG
GATGCTTCTTTGAAAGCTTTATGGCTTTGGCTTTAATGGAGTCTCTGTATTCCTCGAATTTCGAGATGAATCTCCTGAAAGGCATTCCCCTGAAAGAGGTACCATTGGAG
GAATTGGAAGAAGATGATGCAGATAACGATGAAGTTGTGGCTGATAGAACACCATTTTGTTCGTTCAAAGGAGGAGCTTTTGTGGATCTACTTGAACTTAAGGACTCATT
GTTTTTAGAACCCATTGAAGAAGCCAATGCCCTTTTCTTGTACTTACAGCTGAATATGCCTCTAACAACTGCCCAAGACGGCGGCTTCTCTGCCTTCTGCGCCTTTGGTT
TCTGGTTTTCATGGCTCTGTCTGCCATGGCAGATGCCATTTTCTTACACTGAAAATGTGAAAAAAAAAGTAGAGAAGTATTTCAAGGCAAATGAAATGGGGGTGCTTTGC
TTAAAAGCTGCTGATGCTGGTGGTGGTGGTGTTGATTCCCTCTGCCTCAAAATCACCACTGCACCATTTCTTATGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCGTCAAGAGCCATGGTGAAATTGAAGATTTCCAGCTTGAAACGTCCCCTCCAGTGGCCTCTGCCGCCACCTTGAACCCATTCTTGATTATGCTACAGACATT
GCATTGTGGTATTGAACTGCAGAGGTTGGAGGAGCCATTAAGGCCCAATGAGCAGGCCAAGGTGGTGCAGTGGAACCTTAAGAGTTCGTTGCCATCTGCTATGCATCGTG
GATGCTTCTTTGAAAGCTTTATGGCTTTGGCTTTAATGGAGTCTCTGTATTCCTCGAATTTCGAGATGAATCTCCTGAAAGGCATTCCCCTGAAAGAGGTACCATTGGAG
GAATTGGAAGAAGATGATGCAGATAACGATGAAGTTGTGGCTGATAGAACACCATTTTGTTCGTTCAAAGGAGGAGCTTTTGTGGATCTACTTGAACTTAAGGACTCATT
GTTTTTAGAACCCATTGAAGAAGCCAATGCCCTTTTCTTGTACTTACAGCTGAATATGCCTCTAACAACTGCCCAAGACGGCGGCTTCTCTGCCTTCTGCGCCTTTGGTT
TCTGGTTTTCATGGCTCTGTCTGCCATGGCAGATGCCATTTTCTTACACTGAAAATGTGAAAAAAAAAGTAGAGAAGTATTTCAAGGCAAATGAAATGGGGGTGCTTTGC
TTAAAAGCTGCTGATGCTGGTGGTGGTGGTGTTGATTCCCTCTGCCTCAAAATCACCACTGCACCATTTCTTATGGAATAA
Protein sequenceShow/hide protein sequence
MAAVKSHGEIEDFQLETSPPVASAATLNPFLIMLQTLHCGIELQRLEEPLRPNEQAKVVQWNLKSSLPSAMHRGCFFESFMALALMESLYSSNFEMNLLKGIPLKEVPLE
ELEEDDADNDEVVADRTPFCSFKGGAFVDLLELKDSLFLEPIEEANALFLYLQLNMPLTTAQDGGFSAFCAFGFWFSWLCLPWQMPFSYTENVKKKVEKYFKANEMGVLC
LKAADAGGGGVDSLCLKITTAPFLME