; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G024510 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G024510
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUbiquitin-fold modifier 1
Genome locationCmo_Chr04:18149268..18151614
RNA-Seq ExpressionCmoCh04G024510
SyntenyCmoCh04G024510
Gene Ontology termsGO:1990592 - protein K69-linked ufmylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005375 - Ubiquitin-fold modifier 1
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV76212.1 Thaumatin domain-containing protein/Ufm1 domain-containing protein [Cephalotus follicularis]7.6e-3583.33Show/hide
Query:  GAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMR
        G GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP      T  +   DGVGINPQQSAGNVFLKHGSELRLIPRDRVGA+GS++
Subjt:  GAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMR

XP_004140331.1 ubiquitin-fold modifier 1 [Cucumis sativus]4.5e-3587.23Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP      T  +   DGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA

XP_022141697.1 ubiquitin-fold modifier 1 [Momordica charantia]6.2e-3784.85Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP      T  +   DGVGINPQQSAGNVFLKHGSELRLIPRDRVGA+G++RM
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM

XP_022990075.1 ubiquitin-fold modifier 1-like [Cucurbita maxima]2.6e-3586.32Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAG
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP      T  +   DGVGINPQQSAGNVFLKHGSELRLIPRDRVGA G
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAG

XP_023547732.1 ubiquitin-fold modifier 1-like [Cucurbita pepo subsp. pepo]5.6e-3887.88Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP      T  +   DGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM

TrEMBL top hitse value%identityAlignment
A0A0A0KTD7 Ubiquitin-fold modifier 12.2e-3587.23Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP      T  +   DGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA

A0A6J1CKK3 Ubiquitin-fold modifier 13.0e-3784.85Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP      T  +   DGVGINPQQSAGNVFLKHGSELRLIPRDRVGA+G++RM
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM

A0A6J1FF53 Ubiquitin-fold modifier 12.2e-3587.23Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP      T  +   DGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA

A0A6J1JP49 Ubiquitin-fold modifier 11.3e-3586.32Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAG
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP      T  +   DGVGINPQQSAGNVFLKHGSELRLIPRDRVGA G
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAG

A0A6J1JXE3 Ubiquitin-fold modifier 12.2e-3587.23Show/hide
Query:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
        MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP      T  +   DGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA
Subjt:  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAA

SwissProt top hitse value%identityAlignment
A8Q8M5 Ubiquitin-fold modifier 15.3e-3177.91Show/hide
Query:  GKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVG
        GKV+FK+TLTSDPKLPFKV SVPE+ PFTAVLKFAAEEFKVP++    T  +   DGVGINP QSAGN+FLKHGSELRLIPRDRVG
Subjt:  GKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVG

Q5PU89 Ubiquitin-fold modifier 18.2e-3275.53Show/hide
Query:  GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMR
        G  KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP+     T  +   DGVGINPQQ+AGNVFLKHGSELRLIPRDRVG +   R
Subjt:  GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMR

Q94DM8 Ubiquitin-fold modifier 16.1e-3584.44Show/hide
Query:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA
        AGGGKVSFK+ LTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVP      T  +   DGVGINPQQSAGNVFLKHGSELRLIPRDRVGA
Subjt:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA

Q94EY2 Ubiquitin-fold modifier 12.4e-3176.92Show/hide
Query:  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMR
        KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP+     T  +   DGVGINPQQ AGNVFLKHGSELRLIPRDRVG     R
Subjt:  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMR

Q9CA23 Ubiquitin-fold modifier 13.0e-3483.33Show/hide
Query:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA
        A GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVP      T  +   DG+GINPQQSAGNVFLKHGSELRLIPRDRVGA
Subjt:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA

Arabidopsis top hitse value%identityAlignment
AT1G77710.1 CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 Blast hits to 244 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).2.1e-3583.33Show/hide
Query:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA
        A GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVP      T  +   DG+GINPQQSAGNVFLKHGSELRLIPRDRVGA
Subjt:  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGTGCTGGTGGCGGAAAGGTCTCCTTCAAAGTGACCCTCACCTCGGACCCTAAGCTCCCTTTCAAAGTGTTTAGTGTTCCAGAGGCCGCGCCATTCACCGCTGT
CCTTAAATTTGCCGCTGAAGAATTTAAGGTGCCATCATCACCAATGGTGTTAACATTTATCGTATGCCTTACAGATGGCGTTGGAATCAACCCTCAGCAAAGTGCTGGCA
ATGTCTTCCTCAAGCACGGCTCTGAACTACGCCTGATTCCTCGTGATAGAGTCGGAGCTGCTGGATCTATGAGAATGTAA
mRNA sequenceShow/hide mRNA sequence
GAGATCGAAAATGGCGGGTGCTGGTGGCGGAAAGGTCTCCTTCAAAGTGACCCTCACCTCGGACCCTAAGCTCCCTTTCAAAGTGTTTAGTGTTCCAGAGGCCGCGCCAT
TCACCGCTGTCCTTAAATTTGCCGCTGAAGAATTTAAGGTGCCATCATCACCAATGGTGTTAACATTTATCGTATGCCTTACAGATGGCGTTGGAATCAACCCTCAGCAA
AGTGCTGGCAATGTCTTCCTCAAGCACGGCTCTGAACTACGCCTGATTCCTCGTGATAGAGTCGGAGCTGCTGGATCTATGAGAATGTAA
Protein sequenceShow/hide protein sequence
MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPSSPMVLTFIVCLTDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM