; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G024700 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G024700
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionphotosystem II 22 kDa protein, chloroplastic-like
Genome locationCmo_Chr04:18247639..18249613
RNA-Seq ExpressionCmoCh04G024700
SyntenyCmoCh04G024700
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0010196 - nonphotochemical quenching (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602094.1 Photosystem II 22 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.4e-14299.26Show/hide
Query:  MVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQNELFVG
        MVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKK  VVKPKEKVEDGIFGTSGGIGFTKQNELFVG
Subjt:  MVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQNELFVG

Query:  RVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGFTKA
        RVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGFTKA
Subjt:  RVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGFTKA

Query:  NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
Subjt:  NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

XP_004150442.1 photosystem II 22 kDa protein, chloroplastic [Cucumis sativus]1.3e-12787.77Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPN-AQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQ
        MAAQTM+L+SGVC  HGV LKRE++     LRPN  QF+RLFFNPLPS SVSLP RGF TLA+FKS+ K P KK  V KPK+KVEDGIFGTSGGIGFTKQ
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPN-AQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQ

Query:  NELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPL
        NELFVGRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPL
Subjt:  NELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPL

Query:  FGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        FGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

XP_022952982.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata]8.7e-14599.28Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN
        MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKK  VVKPKEKVEDGIFGTSGGIGFTKQN
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF
        ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF
Subjt:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

XP_022991058.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima]2.1e-14398.56Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN
        MAAQTMVLSSGVCASHGVALKREIASLT+RLRPNAQ SRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKK  VVKPKEKVEDGIFGTSGGIGFTKQN
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF
        ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF
Subjt:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

XP_038885143.1 photosystem II 22 kDa protein, chloroplastic [Benincasa hispida]7.1e-13189.89Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN
        MAAQTM+L+SGVC  HGV +KRE+     RLRPNAQFSRLFFNPLPS SVSLPARGF TLA+FKS+ K P KK  V KPK+KVEDGIFGTSGGIGFTKQN
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF
        ELFVGRVAMIGFAASLLGE ITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPLF
Subjt:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

TrEMBL top hitse value%identityAlignment
A0A0A0K7N4 Photosystem II protein6.1e-12887.77Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPN-AQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQ
        MAAQTM+L+SGVC  HGV LKRE++     LRPN  QF+RLFFNPLPS SVSLP RGF TLA+FKS+ K P KK  V KPK+KVEDGIFGTSGGIGFTKQ
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPN-AQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQ

Query:  NELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPL
        NELFVGRVAMIGFAAS+LGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPL
Subjt:  NELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPL

Query:  FGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        FGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

A0A1S3CS23 photosystem II 22 kDa protein, chloroplastic1.8e-12787.77Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRP-NAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQ
        MAAQTM+L+SGVC  HGV LKRE++     LRP N QF+RLFFNPLP+ SVSLPARGF  LA+FKS+ K P KK  V KPK+KVEDGIFGTSGGIGFTKQ
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRP-NAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQ

Query:  NELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPL
        NELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPL
Subjt:  NELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPL

Query:  FGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        FGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

A0A5A7UZ08 Photosystem II 22 kDa protein1.8e-12787.77Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRP-NAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQ
        MAAQTM+L+SGVC  HGV LKRE++     LRP N QF+RLFFNPLP+ SVSLPARGF  LA+FKS+ K P KK  V KPK+KVEDGIFGTSGGIGFTKQ
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRP-NAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQ

Query:  NELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPL
        NELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  RSALGLKEGGPL
Subjt:  NELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPL

Query:  FGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        FGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Subjt:  FGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

A0A6J1GLX6 photosystem II 22 kDa protein, chloroplastic-like4.2e-14599.28Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN
        MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKK  VVKPKEKVEDGIFGTSGGIGFTKQN
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF
        ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF
Subjt:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

A0A6J1JV31 photosystem II 22 kDa protein, chloroplastic-like1.0e-14398.56Show/hide
Query:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN
        MAAQTMVLSSGVCASHGVALKREIASLT+RLRPNAQ SRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKK  VVKPKEKVEDGIFGTSGGIGFTKQN
Subjt:  MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF
        ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF
Subjt:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

SwissProt top hitse value%identityAlignment
P54773 Photosystem II 22 kDa protein, chloroplastic9.7e-10774.38Show/hide
Query:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLP----SSSVSLPARGF--RTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGF
        AQTM+L++           R   SL +RL+P    S LF   LP    SSS +  +  F   T+A+FKSKAK P KKV   K K+KVEDGIFGTSGGIGF
Subjt:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLP----SSSVSLPARGF--RTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGF

Query:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEG
        TKQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGALGDRGKF+DDP P TGLE+AVIPPGK  +SALGL EG
Subjt:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEG

Query:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        GPLFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEEED
Subjt:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

Q02060 Photosystem II 22 kDa protein, chloroplastic4.2e-11075.99Show/hide
Query:  MAAQTMVLSSGVCASHGVALKRE--IASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTK
        MA   +++  GV  ++ + LKR   +    Q+++P +  S LFF+PLPSSS S  +  F+TLA+FKSKAK P K   V KPK KVEDG+FGTSGGIGFTK
Subjt:  MAAQTMVLSSGVCASHGVALKRE--IASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTK

Query:  QNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGP
        +NELFVGRVAMIGFAASLLGEGITGKGIL+QLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRG+F+D  EP TGLE+AVIPPGK +RSALGLK  GP
Subjt:  QNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGP

Query:  LFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        LFGFTK+NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNV+FFFIAA+NPGTGKF+TD+EE+
Subjt:  LFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

Q9FPP4 Photosystem II 22 kDa protein, chloroplastic7.4e-10774.38Show/hide
Query:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLP----SSSVSLPARGF--RTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGF
        AQTM+L++           R   SL +RL+P    S LF   LP    SS+ +  +  F   T+A+FKSKAK P KKV   K K+KVEDGIFGTSGGIGF
Subjt:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLP----SSSVSLPARGF--RTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGF

Query:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEG
        TKQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGALGDRG+FIDDP PATGLE+AVIPPGK  +SALGL EG
Subjt:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEG

Query:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        GPLFGFTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEEED
Subjt:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

Q9SMB4 Photosystem II 22 kDa protein, chloroplastic4.8e-10675.09Show/hide
Query:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNP-----LPSSSVSLPAR-GFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGF
        AQTM+L++           R   SL +RL+P    S  FF P      PS+S S  +     T+A+FKSKAK PAKKV V KPKEKVEDGIFGTSGGIGF
Subjt:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNP-----LPSSSVSLPAR-GFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGF

Query:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEG
        TKQNELFVGRVAMIGFAASLLGE ITGKGILAQLNLETG+PIYEAEPLLLFFILF LLGAIGAL DRGKFIDDP P TGL++AVIPPGKG +SALGL EG
Subjt:  TKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEG

Query:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        GPLF FTKANELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEPL+L N++FFF+AA+NPGTGKFVTDEEE+
Subjt:  GPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

Q9XF91 Photosystem II 22 kDa protein, chloroplastic1.6e-10173.65Show/hide
Query:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPAR--GFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN
        AQTM+L+SGV A H +  K  +A          +   LF +   +S V+LP+R   F  LA+FK K K   KK  V KPK KVEDGIFGTSGGIGFTK N
Subjt:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPAR--GFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF
        ELFVGRVAMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK +RSALGLKE GPLF
Subjt:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        GFTKANELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ E+
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

Arabidopsis top hitse value%identityAlignment
AT1G44575.1 Chlorophyll A-B binding family protein1.1e-10273.65Show/hide
Query:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPAR--GFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN
        AQTM+L+SGV A H +  K  +A          +   LF +   +S V+LP+R   F  LA+FK K K   KK  V KPK KVEDGIFGTSGGIGFTK N
Subjt:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPAR--GFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF
        ELFVGRVAMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK +RSALGLKE GPLF
Subjt:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLF

Query:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED
        GFTKANELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEPLVLLNV FFF AA+NPG GKF+TD+ E+
Subjt:  GFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED

AT1G44575.2 Chlorophyll A-B binding family protein1.3e-6169.04Show/hide
Query:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPAR--GFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN
        AQTM+L+SGV A H +  K  +A          +   LF +   +S V+LP+R   F  LA+FK K K   KK  V KPK KVEDGIFGTSGGIGFTK N
Subjt:  AQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPAR--GFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQN

Query:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGG
        ELFVGRVAMIGFAASLLGE +TGKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIPPGK +RSALGLKE G
Subjt:  ELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCAAACCATGGTTCTTTCCTCCGGTGTGTGCGCCAGCCATGGCGTAGCGTTGAAGAGAGAAATCGCTTCGTTGACGCAGAGGCTTAGACCTAACGCCCAATT
TAGTCGCTTGTTTTTCAATCCTCTGCCTTCGAGTTCCGTTTCTTTACCTGCGCGTGGATTTAGGACTCTTGCGATCTTTAAATCGAAGGCGAAAGTGCCGGCGAAGAAGG
TAATTGTTGTGAAGCCGAAGGAGAAGGTTGAAGACGGCATTTTCGGGACGTCTGGTGGCATTGGTTTCACTAAGCAGAATGAACTGTTCGTCGGCCGTGTCGCCATGATC
GGCTTTGCTGCGTCGTTGCTGGGAGAGGGAATCACCGGAAAGGGAATTCTGGCTCAACTGAATTTAGAAACTGGAGTTCCGATTTACGAAGCGGAGCCTCTTCTTCTGTT
CTTCATCTTATTCACTCTTCTCGGAGCCATTGGAGCGCTAGGAGACCGTGGAAAATTCATCGACGATCCAGAACCAGCCACCGGACTGGAACGCGCCGTTATCCCTCCCG
GCAAGGGCCTCAGATCGGCGCTAGGTCTCAAAGAAGGAGGTCCGTTGTTCGGATTCACGAAGGCAAATGAGCTGTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGCGTTC
TCGCTGATCGGAGAAATTATTACAGGTAAGGGAGCGTTGGCGCAGTTGAACATTGAGACGGGAGTGCCGATCAATGAAATTGAGCCGCTGGTTTTGTTGAACGTTCTGTT
TTTCTTCATTGCTGCTGTGAATCCTGGAACTGGTAAATTCGTCACTGACGAGGAAGAGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTCAAACCATGGTTCTTTCCTCCGGTGTGTGCGCCAGCCATGGCGTAGCGTTGAAGAGAGAAATCGCTTCGTTGACGCAGAGGCTTAGACCTAACGCCCAATT
TAGTCGCTTGTTTTTCAATCCTCTGCCTTCGAGTTCCGTTTCTTTACCTGCGCGTGGATTTAGGACTCTTGCGATCTTTAAATCGAAGGCGAAAGTGCCGGCGAAGAAGG
TAATTGTTGTGAAGCCGAAGGAGAAGGTTGAAGACGGCATTTTCGGGACGTCTGGTGGCATTGGTTTCACTAAGCAGAATGAACTGTTCGTCGGCCGTGTCGCCATGATC
GGCTTTGCTGCGTCGTTGCTGGGAGAGGGAATCACCGGAAAGGGAATTCTGGCTCAACTGAATTTAGAAACTGGAGTTCCGATTTACGAAGCGGAGCCTCTTCTTCTGTT
CTTCATCTTATTCACTCTTCTCGGAGCCATTGGAGCGCTAGGAGACCGTGGAAAATTCATCGACGATCCAGAACCAGCCACCGGACTGGAACGCGCCGTTATCCCTCCCG
GCAAGGGCCTCAGATCGGCGCTAGGTCTCAAAGAAGGAGGTCCGTTGTTCGGATTCACGAAGGCAAATGAGCTGTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGCGTTC
TCGCTGATCGGAGAAATTATTACAGGTAAGGGAGCGTTGGCGCAGTTGAACATTGAGACGGGAGTGCCGATCAATGAAATTGAGCCGCTGGTTTTGTTGAACGTTCTGTT
TTTCTTCATTGCTGCTGTGAATCCTGGAACTGGTAAATTCGTCACTGACGAGGAAGAGGATTAATGAATGGATCGATTCTGCTTTAGTTTCTCTGTACATGAACTTAGAG
TTTGTGCAGTTTTAGCGTATTTATTTTGCATCAGCGCCCAAAAACAACGAATCTAAGGAACAAACCTTGGCTAGTGAATTGTAGGAAACCTGCAATATTTCTTTAAATTT
GAGGCACAACTTGATAAGATAATCGATTTTGATTTTATTTCTAAAAATATTATAAATTATGATCATGGTGTATATATATATATATAAACCACAATGATATGATATTGTCC
A
Protein sequenceShow/hide protein sequence
MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKSKAKVPAKKVIVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMI
GFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAF
SLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED