; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G024740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G024740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionzinc_ribbon_15 domain-containing protein
Genome locationCmo_Chr04:18264514..18264852
RNA-Seq ExpressionCmoCh04G024740
SyntenyCmoCh04G024740
Gene Ontology termsNA
InterPro domainsIPR031493 - Zinc-ribbon 15


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602097.1 hypothetical protein SDJN03_07330, partial [Cucurbita argyrosperma subsp. sororia]9.1e-6197.32Show/hide
Query:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP
        MFFF VGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSP PISDQLPPS ALLRALRCHSCNKVVEP
Subjt:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCPFCGSSL
Subjt:  DFSFCPFCGSSL

XP_022962458.1 uncharacterized protein LOC111462885 [Cucurbita moschata]5.7e-63100Show/hide
Query:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP
        MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP
Subjt:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCPFCGSSL
Subjt:  DFSFCPFCGSSL

XP_022992997.1 uncharacterized protein LOC111489157 [Cucurbita maxima]1.7e-5488.39Show/hide
Query:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP
        MFFFFVGGLEQQVR LLK+ AGRCI+CNSPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNC LFFPRSFSPPPISDQ  P AAL R LRC SCNKVVEP
Subjt:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCPFCG SL
Subjt:  DFSFCPFCGSSL

XP_023541925.1 uncharacterized protein LOC111801919 [Cucurbita pepo subsp. pepo]1.3e-6299.11Show/hide
Query:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP
        MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP
Subjt:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCPFCGSS+
Subjt:  DFSFCPFCGSSL

XP_038884584.1 uncharacterized protein LOC120075351 [Benincasa hispida]2.6e-5587.5Show/hide
Query:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP
        MFFFFVGGL+QQVR ++K+ AGRCI+CNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFP+SFSPPPISDQ  PSAALLRAL C SCN+VVEP
Subjt:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCP+CGSSL
Subjt:  DFSFCPFCGSSL

TrEMBL top hitse value%identityAlignment
A0A0A0KDD6 zinc_ribbon_15 domain-containing protein5.8e-5387.5Show/hide
Query:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP
        MFFFFVGGLEQQVR LLK+GA RCI+CNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFP+S SPP  SDQ   SA LLRALRC SCNKVVEP
Subjt:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCP+CGSSL
Subjt:  DFSFCPFCGSSL

A0A6J1CIA7 uncharacterized protein LOC1110118761.3e-5284.96Show/hide
Query:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPS-AALLRALRCHSCNKVVE
        MFFFF GGLEQQVR LLK+GAGRCI CNSPADLVDYEKVLKLFF PVWRWPGKEPLMHCNNCKLFFP+S SPPP+SDQLPP+ AAL + LRC SCN++VE
Subjt:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPS-AALLRALRCHSCNKVVE

Query:  PDFSFCPFCGSSL
        P FSFCPFCGSSL
Subjt:  PDFSFCPFCGSSL

A0A6J1FFV9 uncharacterized protein LOC1114451042.6e-5386.61Show/hide
Query:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP
        MFFFFVGGLEQQVR LLK+ AGRCI+CNSPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNC LFFP SFSPPPISDQ  P AA  R LRC SCNKVVEP
Subjt:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        +FSFCPFCGSSL
Subjt:  DFSFCPFCGSSL

A0A6J1HEV4 uncharacterized protein LOC1114628852.8e-63100Show/hide
Query:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP
        MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP
Subjt:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCPFCGSSL
Subjt:  DFSFCPFCGSSL

A0A6J1JRI4 uncharacterized protein LOC1114891578.1e-5588.39Show/hide
Query:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP
        MFFFFVGGLEQQVR LLK+ AGRCI+CNSPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNC LFFPRSFSPPPISDQ  P AAL R LRC SCNKVVEP
Subjt:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        DFSFCPFCG SL
Subjt:  DFSFCPFCGSSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G44414.1 unknown protein2.7e-4265.18Show/hide
Query:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP
        MFFFFVGGL QQVR +LK+GAG CI C S ADLV+Y+KV+KLFFVPVWRWPGK+PL+HC +C LFFP+S SPPP+S              C  C++VVEP
Subjt:  MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEP

Query:  DFSFCPFCGSSL
        +F FCPFCGSSL
Subjt:  DFSFCPFCGSSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTCTTCTTCGTCGGAGGGTTAGAGCAACAAGTCCGCCATCTCTTGAAAGCCGGTGCCGGTCGATGCATAAGCTGTAACTCACCGGCCGATCTCGTAGACTACGA
AAAAGTTCTGAAGCTCTTCTTTGTTCCAGTGTGGCGGTGGCCGGGAAAAGAGCCGTTGATGCACTGCAACAACTGTAAGCTGTTTTTCCCTCGGTCATTCTCACCGCCGC
CTATTTCCGATCAATTGCCGCCGTCAGCCGCTCTTTTGAGGGCCCTTCGTTGCCATTCCTGTAACAAAGTAGTGGAGCCCGATTTCAGCTTCTGCCCTTTCTGTGGCTCT
TCTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTCTTCTTCGTCGGAGGGTTAGAGCAACAAGTCCGCCATCTCTTGAAAGCCGGTGCCGGTCGATGCATAAGCTGTAACTCACCGGCCGATCTCGTAGACTACGA
AAAAGTTCTGAAGCTCTTCTTTGTTCCAGTGTGGCGGTGGCCGGGAAAAGAGCCGTTGATGCACTGCAACAACTGTAAGCTGTTTTTCCCTCGGTCATTCTCACCGCCGC
CTATTTCCGATCAATTGCCGCCGTCAGCCGCTCTTTTGAGGGCCCTTCGTTGCCATTCCTGTAACAAAGTAGTGGAGCCCGATTTCAGCTTCTGCCCTTTCTGTGGCTCT
TCTCTGTAA
Protein sequenceShow/hide protein sequence
MFFFFVGGLEQQVRHLLKAGAGRCISCNSPADLVDYEKVLKLFFVPVWRWPGKEPLMHCNNCKLFFPRSFSPPPISDQLPPSAALLRALRCHSCNKVVEPDFSFCPFCGS
SL