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CmoCh04G024970 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G024970
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontrichohyalin-like
Genome locationCmo_Chr04:18370342..18371477
RNA-Seq ExpressionCmoCh04G024970
SyntenyCmoCh04G024970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EST45492.1 Hypothetical protein SS50377_14564 [Spironucleus salmonicida]1.5e-0432.76Show/hide
Query:  EVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNP
        EVVK +G+   L+ E V++ G ++ ++   EVVK +G+   L+ E V++ G ++ ++   EVVK +G+   L+ E V++ G ++ ++   EVVK +G+  
Subjt:  EVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNP

Query:  HLREERVESQGEMREA
         L+ E  E++GE+  A
Subjt:  HLREERVESQGEMREA

TNN70768.1 hypothetical protein EYF80_019051 [Liparis tanakae]4.3e-0738.26Show/hide
Query:  EICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIE
        E+ +E VK EGR+  +R E V+ +G  +  E+ +E VK EGR   +R E  + QG  +  E+ +E VK EGR   +R E V+ +G     E+ +E VK E
Subjt:  EICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIE

Query:  GRNPHLREERVESQG
        GR+  LR E ++ +G
Subjt:  GRNPHLREERVESQG

XP_025752877.1 golgin subfamily A member 6-like protein 22 [Oreochromis niloticus]1.1e-0531.15Show/hide
Query:  KHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVV
        K+ E+  E +K+E +N  L EE+ + +   K+ E+  E  K+E RN  L EE+++ +   K+ E+  E +K+E +N  L EE+++ +   K +E   E +
Subjt:  KHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVV

Query:  KIEGRNPHLREERVESQGEMRE
        K+E +N  L EE+++ + + +E
Subjt:  KIEGRNPHLREERVESQGEMRE

XP_025753541.1 golgin subfamily A member 6-like protein 22 [Oreochromis niloticus]7.6e-0428.69Show/hide
Query:  KHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVV
        K+ E+  E  K+E +N  L EE+++ +   K+ E+  E  K+E +N  L EE+++ +   K +E   E +K+E +N  L EE+ + +   K+ EI  E  
Subjt:  KHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVV

Query:  KIEGRNPHLREERVESQGEMRE
        K+E +N  + +++ + +   +E
Subjt:  KIEGRNPHLREERVESQGEMRE

TrEMBL top hitse value%identityAlignment
A0A4Z2HYN4 Uncharacterized protein2.1e-0738.26Show/hide
Query:  EICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIE
        E+ +E VK EGR+  +R E V+ +G  +  E+ +E VK EGR   +R E  + QG  +  E+ +E VK EGR   +R E V+ +G     E+ +E VK E
Subjt:  EICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIE

Query:  GRNPHLREERVESQG
        GR+  LR E ++ +G
Subjt:  GRNPHLREERVESQG

A0A6P6NDE4 trichohyalin-like8.2e-0431.97Show/hide
Query:  RTRKNKRESSAQSDRKRLYRNQINETQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVV
        R    + E   Q D+      +  E +   +  EI ++  ++E R    +EERVES+ G    EI ++  ++E      +EERVES+ G    EI ++  
Subjt:  RTRKNKRESSAQSDRKRLYRNQINETQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVV

Query:  KIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPHLREERVESQ
        ++E R    +EERVES+ G    EI ++  ++E R    +EERVES+
Subjt:  KIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPHLREERVESQ

V6LLP0 Uncharacterized protein7.4e-0532.76Show/hide
Query:  EVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNP
        EVVK +G+   L+ E V++ G ++ ++   EVVK +G+   L+ E V++ G ++ ++   EVVK +G+   L+ E V++ G ++ ++   EVVK +G+  
Subjt:  EVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNP

Query:  HLREERVESQGEMREA
         L+ E  E++GE+  A
Subjt:  HLREERVESQGEMREA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAGGTCCGCTACTCGAGCTTTCCTGGAACAAAGTATGAGAATCTTAATCTTTGTGACATGAGAACAAGAAAAAACAAGAGAGAATCGTCAGCTCAGAGCGATCG
GAAACGTTTGTACCGAAATCAAATCAATGAAACGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGAACCTGAGAGAAG
AGAGAGTTGAATCGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGAACCTGAGAGAAGAGAGAGTTGAATCGCAAGGA
GGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGAACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGGACTAAAACATGTAGAGAT
ATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGCACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGAAATGCGGGAAGCAGCGACTCAGTGGATTGTAGTACAGC
TCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAGGTCCGCTACTCGAGCTTTCCTGGAACAAAGTATGAGAATCTTAATCTTTGTGACATGAGAACAAGAAAAAACAAGAGAGAATCGTCAGCTCAGAGCGATCG
GAAACGTTTGTACCGAAATCAAATCAATGAAACGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGAACCTGAGAGAAG
AGAGAGTTGAATCGCAAGGAGGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGAACCTGAGAGAAGAGAGAGTTGAATCGCAAGGA
GGACTAAAACATGTAGAGATATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGAACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGGACTAAAACATGTAGAGAT
ATGTATTGAAGTTGTGAAGATTGAAGGAAGAAATCCGCACCTGAGAGAAGAGAGAGTTGAATCGCAAGGAGAAATGCGGGAAGCAGCGACTCAGTGGATTGTAGTACAGC
TCTATTAA
Protein sequenceShow/hide protein sequence
MSQVRYSSFPGTKYENLNLCDMRTRKNKRESSAQSDRKRLYRNQINETQGGLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPNLREERVESQG
GLKHVEICIEVVKIEGRNPNLREERVESQGGLKHVEICIEVVKIEGRNPHLREERVESQGEMREAATQWIVVQLY