; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G025120 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G025120
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr04:18511572..18511970
RNA-Seq ExpressionCmoCh04G025120
SyntenyCmoCh04G025120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647260.1 hypothetical protein Csa_018328, partial [Cucumis sativus]3.4e-0655.56Show/hide
Query:  VLPLIPAKPDTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPKTHRRRPKPIIHD
        V  L P KP  A  S   +  R G  K+KSVIPK+RKLVKTM+YH +KDFL SLF RP      RPKPI  D
Subjt:  VLPLIPAKPDTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPKTHRRRPKPIIHD

KAG6602131.1 hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia]2.7e-4865.64Show/hide
Query:  MRFKVSPDDNRELPEQNPTAHHPPSVNGNHLPPIDPVKSEIATWTKLAI-------------------------------PYQICDGKAKSVLPLIPAKP
        MRF+VSPDDNR LPEQNPTAH+ PS+N NHL PIDP KSEI+T TK AI                               PYQ+ DGKA+SVLPL PA P
Subjt:  MRFKVSPDDNRELPEQNPTAHHPPSVNGNHLPPIDPVKSEIATWTKLAI-------------------------------PYQICDGKAKSVLPLIPAKP

Query:  DTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPKTHRRRPKPIIHD
        +TAVTSTNS+GYRAG+GKVKSVIPKKRKLVKTMMYHCIK+F+KSLFRRPPKTH  RPKPI  D
Subjt:  DTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPKTHRRRPKPIIHD

KAG6602132.1 hypothetical protein SDJN03_07365, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3462.24Show/hide
Query:  MRFKVSPDDNRELPEQNPTAHHPPSVNGNHLPPIDPVKSEI----------ATWTKLAIPYQICDGKAKSVLPLIPAKPDTAVTS----TNSVGYRAGIG
        MRF+VSPD NR +P+ +PT HHPPS+N +HL PIDP KS +             T+  I  +  DGKAKSVLPLI    +TAVTS    T+S GYR GIG
Subjt:  MRFKVSPDDNRELPEQNPTAHHPPSVNGNHLPPIDPVKSEI----------ATWTKLAIPYQICDGKAKSVLPLIPAKPDTAVTS----TNSVGYRAGIG

Query:  KVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPKTHRRRPKPI
        K KSVIPK+RKLVKTMMYHCIK+FLKSLFRRPP+TH  RPKPI
Subjt:  KVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPKTHRRRPKPI

KAG6602134.1 hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sororia]2.9e-6696.97Show/hide
Query:  MRFKVSPDDNRELPEQNPTAHHPPSVNGNHLPPIDPVKSEIATWTKLAIPYQICDGKAKSVLPLIPAKPDTAVTSTNSVGYRAGIGKVKSVIPKKRKLVK
        MRF+VSPDDNRELPEQNPTAHHPPSVNGNHLPPIDPVKSEIAT TKLAIPYQICDGKAKSVLPLIPAKPDTAVTSTNSV YRAGIGKVKSVIPKKRKLVK
Subjt:  MRFKVSPDDNRELPEQNPTAHHPPSVNGNHLPPIDPVKSEIATWTKLAIPYQICDGKAKSVLPLIPAKPDTAVTSTNSVGYRAGIGKVKSVIPKKRKLVK

Query:  TMMYHCIKDFLKSLFRRPPKTHRRRPKPIIHD
        TMMYHCIKDFLKSLFR PPKTHRRRPKPIIHD
Subjt:  TMMYHCIKDFLKSLFRRPPKTHRRRPKPIIHD

XP_022141661.1 uncharacterized protein LOC111011963 [Momordica charantia]4.0e-0746.39Show/hide
Query:  EIATWTK----LAIPYQICDGKAKSVLPLIPAKP----DTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPKTHRRRPKP
        +I  W +    L  P  I DG       L P  P    + AVT+  ++G RAG GKVKSVIPK+R LVKTM+Y+ IKDF+ SLFR PP      P P
Subjt:  EIATWTK----LAIPYQICDGKAKSVLPLIPAKP----DTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPKTHRRRPKP

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ7 Uncharacterized protein1.6e-0655.56Show/hide
Query:  VLPLIPAKPDTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPKTHRRRPKPIIHD
        V  L P KP  A  S   +  R G  K+KSVIPK+RKLVKTM+YH +KDFL SLF RP      RPKPI  D
Subjt:  VLPLIPAKPDTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPKTHRRRPKPIIHD

A0A0A0KFQ1 Uncharacterized protein3.1e-0557.89Show/hide
Query:  LIPAKPDTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPK
        +IPAK +TA     ++ Y  G G VKSVIPKKR+LVK MMY CIK+++KSLF   PK
Subjt:  LIPAKPDTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPK

A0A5D3D590 Uncharacterized protein2.8e-0656.9Show/hide
Query:  PLIPAKPDTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPK
        P++P K  TA+    ++ YR G G +KSVIPKKRKLVK MMY CIK+++KSLFR  P+
Subjt:  PLIPAKPDTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPK

A0A6J1CJW3 uncharacterized protein LOC1110119631.9e-0746.39Show/hide
Query:  EIATWTK----LAIPYQICDGKAKSVLPLIPAKP----DTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPKTHRRRPKP
        +I  W +    L  P  I DG       L P  P    + AVT+  ++G RAG GKVKSVIPK+R LVKTM+Y+ IKDF+ SLFR PP      P P
Subjt:  EIATWTK----LAIPYQICDGKAKSVLPLIPAKP----DTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRRPPKTHRRRPKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATTCAAAGTCTCGCCGGACGACAATCGGGAGCTACCCGAGCAAAATCCGACCGCCCACCACCCGCCCTCCGTCAATGGCAACCACCTTCCTCCAATCGATCCGGT
GAAATCAGAGATTGCAACGTGGACGAAGCTTGCAATCCCATATCAGATCTGCGACGGAAAAGCGAAATCTGTGCTTCCATTGATTCCGGCGAAACCAGATACGGCGGTGA
CGTCGACCAATTCTGTCGGGTACAGAGCCGGCATCGGAAAAGTGAAATCTGTAATTCCGAAGAAGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGGACTTC
CTCAAATCGCTCTTCCGCCGCCCGCCGAAAACCCACCGCCGCCGCCCCAAACCCATTATCCATGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGATTCAAAGTCTCGCCGGACGACAATCGGGAGCTACCCGAGCAAAATCCGACCGCCCACCACCCGCCCTCCGTCAATGGCAACCACCTTCCTCCAATCGATCCGGT
GAAATCAGAGATTGCAACGTGGACGAAGCTTGCAATCCCATATCAGATCTGCGACGGAAAAGCGAAATCTGTGCTTCCATTGATTCCGGCGAAACCAGATACGGCGGTGA
CGTCGACCAATTCTGTCGGGTACAGAGCCGGCATCGGAAAAGTGAAATCTGTAATTCCGAAGAAGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGGACTTC
CTCAAATCGCTCTTCCGCCGCCCGCCGAAAACCCACCGCCGCCGCCCCAAACCCATTATCCATGACTAG
Protein sequenceShow/hide protein sequence
MRFKVSPDDNRELPEQNPTAHHPPSVNGNHLPPIDPVKSEIATWTKLAIPYQICDGKAKSVLPLIPAKPDTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDF
LKSLFRRPPKTHRRRPKPIIHD