; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G025460 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G025460
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiondof zinc finger protein DOF1.2-like
Genome locationCmo_Chr04:18678551..18679201
RNA-Seq ExpressionCmoCh04G025460
SyntenyCmoCh04G025460
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003851 - Zinc finger, Dof-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602163.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]1.7e-11998.14Show/hide
Query:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
        MSDHHQISHLPPPTPPPFAAHL+RKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
Subjt:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN

Query:  VISTQITEPSSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQ
        VISTQITEPSS+SDIDLAAVFAKFLNTPPSTK HVSTSSPESTDPS+NLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQ
Subjt:  VISTQITEPSSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQ

Query:  LQEWESFSCNYNAEF
        LQEWESFSCNYNAEF
Subjt:  LQEWESFSCNYNAEF

KAG7032855.1 Dof zinc finger protein DOF3.5, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-11997.67Show/hide
Query:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
        MSDHHQISHLPPPTPPPFAAHL+RKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
Subjt:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN

Query:  VISTQITEPSSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQ
        VISTQITEPSS+S+IDLAAVFAKFLNTPPSTK HVSTSSPESTDPS+NLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQ
Subjt:  VISTQITEPSSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQ

Query:  LQEWESFSCNYNAEF
        LQEWESFSCNYNAEF
Subjt:  LQEWESFSCNYNAEF

XP_022923477.1 dof zinc finger protein DOF1.2-like [Cucurbita moschata]4.7e-122100Show/hide
Query:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
        MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
Subjt:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN

Query:  VISTQITEPSSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQ
        VISTQITEPSSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQ
Subjt:  VISTQITEPSSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQ

Query:  LQEWESFSCNYNAEFL
        LQEWESFSCNYNAEFL
Subjt:  LQEWESFSCNYNAEFL

XP_022989804.1 dof zinc finger protein DOF1.2-like [Cucurbita maxima]5.8e-11293.55Show/hide
Query:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
        MSDHHQISHLPP TPPPFAAHL+RKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
Subjt:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN

Query:  VISTQITEPSSR-SDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIE
        VIST+ITEPSS  SDIDLAAVFAKFLNTPPSTK  VSTSSPESTDPS+NLTAKNPEIFFEELSDLFNQPE RIT +YENFPF LQPELTIDELWPSQPIE
Subjt:  VISTQITEPSSR-SDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIE

Query:  QLQEWESFSCNYNAEFL
        QLQEW+SF CNYNAEFL
Subjt:  QLQEWESFSCNYNAEFL

XP_023513410.1 dof zinc finger protein DOF1.2-like [Cucurbita pepo subsp. pepo]2.0e-11294.91Show/hide
Query:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
        MSDHHQISHL    PPPFAAHL+RKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
Subjt:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN

Query:  VISTQITEPSSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQ
        VISTQITE SSRSDIDLAAVFAKFLNTP STK HVSTSSPESTDPS+NLTAKNPEIFFEELSDLFNQPE RIT DYENFPFELQPELTIDELWPSQPIEQ
Subjt:  VISTQITEPSSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQ

Query:  LQEWESFSCNYNAEFL
        LQEWESFSCNYNAEFL
Subjt:  LQEWESFSCNYNAEFL

TrEMBL top hitse value%identityAlignment
A0A5A7USP7 Dof zinc finger protein DOF3.57.0e-6362.01Show/hide
Query:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTI---
        MSDHHQ+    PP PPPF +HL+RKWKPHLE APNCPRCAS NTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRK+RR+KSS SS I   
Subjt:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTI---

Query:  -LPNVISTQITEPSSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHR-------ITNDYENFPFELQPELTI
          P++ S      SS SDIDLAAVFA+FLN+ P       TSSPES DP      +  EIF E LSDL  + E++       I  ++EN  F L+ EL I
Subjt:  -LPNVISTQITEPSSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHR-------ITNDYENFPFELQPELTI

Query:  D-ELWPSQPI-EQLQEWESFSCNYNAEFL
        D E+W SQ + EQ+QE +SFSCNY A  L
Subjt:  D-ELWPSQPI-EQLQEWESFSCNYNAEFL

A0A6J1E679 dof zinc finger protein DOF1.2-like2.3e-122100Show/hide
Query:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
        MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
Subjt:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN

Query:  VISTQITEPSSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQ
        VISTQITEPSSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQ
Subjt:  VISTQITEPSSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQ

Query:  LQEWESFSCNYNAEFL
        LQEWESFSCNYNAEFL
Subjt:  LQEWESFSCNYNAEFL

A0A6J1FHI1 dof zinc finger protein DOF1.2-like8.2e-7268.58Show/hide
Query:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
        MSDHHQ   LPPP PPPFA+HL+RKWKPHLE APNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRK+RR++SS SST+  +
Subjt:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN

Query:  V---ISTQITEPSSRS-DIDLAAVFAKFLNT-PPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLF----NQPEHR---ITNDYENFPFELQPELT
             STQITE SS   DIDLAAVFA++LNT PPST++H  TSSPES DP      +N EIFFE LSDL     NQP+ +   I  +YEN PF L  EL 
Subjt:  V---ISTQITEPSSRS-DIDLAAVFAKFLNT-PPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLF----NQPEHR---ITNDYENFPFELQPELT

Query:  I-DELWPSQPIEQLQEWESFSCNYNA
        + +E+W SQ   Q+QE +SFSCNYNA
Subjt:  I-DELWPSQPIEQLQEWESFSCNYNA

A0A6J1JQE1 dof zinc finger protein DOF1.2-like2.8e-11293.55Show/hide
Query:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
        MSDHHQISHLPP TPPPFAAHL+RKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
Subjt:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN

Query:  VISTQITEPSSR-SDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIE
        VIST+ITEPSS  SDIDLAAVFAKFLNTPPSTK  VSTSSPESTDPS+NLTAKNPEIFFEELSDLFNQPE RIT +YENFPF LQPELTIDELWPSQPIE
Subjt:  VISTQITEPSSR-SDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIE

Query:  QLQEWESFSCNYNAEFL
        QLQEW+SF CNYNAEFL
Subjt:  QLQEWESFSCNYNAEFL

A0A6J1JZV1 dof zinc finger protein DOF1.2-like1.2e-7067.7Show/hide
Query:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN
        MSDHHQ+    PP PPPFA+HL+RKWKPHLE APNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRK+RR++SS SST+  +
Subjt:  MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPN

Query:  V---ISTQITEPSSRS-DIDLAAVFAKFLN-TPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLF----NQPEHR---ITNDYENFPFELQPELT
             STQITE SS   DIDLAAVFA++LN TPPST+ H  TSSPES DP      +N EIFFE L+DL     NQP+ +   I  +YEN PF L  EL 
Subjt:  V---ISTQITEPSSRS-DIDLAAVFAKFLN-TPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLF----NQPEHR---ITNDYENFPFELQPELT

Query:  I-DELWPSQPIEQLQEWESFSCNYNA
        + +ELW SQ   Q+QE +SFSCNYNA
Subjt:  I-DELWPSQPIEQLQEWESFSCNYNA

SwissProt top hitse value%identityAlignment
P68349 Dof zinc finger protein DOF1.26.3e-2941.59Show/hide
Query:  LQRKWKPHLEK----APNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTI-----LPNVISTQ---ITEP
        +  KWK   E+    AP CPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRN+PVGGGCRK  RS+ ++          P+ +  Q       
Subjt:  LQRKWKPHLEK----APNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTI-----LPNVISTQ---ITEP

Query:  SSRSDIDLAAVFAKFL-NTPPSTKSHVSTSSPES--TDPSNNLTAKNPEIFFEELSDL-----FNQPEHRITNDYENFPFELQPELTIDELWPSQP-IEQ
           SDIDLAAVFA+++ +  PS+  + + S  +S  T  ++ L + + +I  E   DL     FN    +   D E F   LQ +   +E++  Q  ++ 
Subjt:  SSRSDIDLAAVFAKFL-NTPPSTKSHVSTSSPES--TDPSNNLTAKNPEIFFEELSDL-----FNQPEHRITNDYENFPFELQPELTIDELWPSQP-IEQ

Query:  LQEWESFSCNYNAE
         +  E   C+++ E
Subjt:  LQEWESFSCNYNAE

Q84JQ8 Dof zinc finger protein DOF1.81.2e-2768.29Show/hide
Query:  PPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSST
        PP  A  ++RK +P  ++A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGGG RK +RS S++SS+
Subjt:  PPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSST

Q8LE43 Dof zinc finger protein DOF2.12.3e-2682.81Show/hide
Query:  KAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSS
        +A NCPRC S NTKFCYYNNYSLSQPRYFCKSCRRYWTKGG+LRNVPVGGGCR+ +RS SS  S
Subjt:  KAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSS

Q9SVC5 Dof zinc finger protein DOF3.51.8e-3160.19Show/hide
Query:  WKP----HLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSRSDIDLAAVF
        W+P    + E  P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGGGCRK+RR KSS+ +    ++ +           IDLA V+
Subjt:  WKP----HLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSRSDIDLAAVF

Query:  AKFLNTPP
        A FLN  P
Subjt:  AKFLNTPP

Q9SXG8 Dof zinc finger protein 12.7e-2768.24Show/hide
Query:  PPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSS
        PP      A   +R+ +P  EKA NCPRC S NTKFCYYNNYSL QPRYFCK+CRRYWT+GGSLRNVPVGGG RK +RS SS +S
Subjt:  PPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSS

Arabidopsis top hitse value%identityAlignment
AT1G21340.1 Dof-type zinc finger DNA-binding family protein4.5e-3041.59Show/hide
Query:  LQRKWKPHLEK----APNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTI-----LPNVISTQ---ITEP
        +  KWK   E+    AP CPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRN+PVGGGCRK  RS+ ++          P+ +  Q       
Subjt:  LQRKWKPHLEK----APNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTI-----LPNVISTQ---ITEP

Query:  SSRSDIDLAAVFAKFL-NTPPSTKSHVSTSSPES--TDPSNNLTAKNPEIFFEELSDL-----FNQPEHRITNDYENFPFELQPELTIDELWPSQP-IEQ
           SDIDLAAVFA+++ +  PS+  + + S  +S  T  ++ L + + +I  E   DL     FN    +   D E F   LQ +   +E++  Q  ++ 
Subjt:  SSRSDIDLAAVFAKFL-NTPPSTKSHVSTSSPES--TDPSNNLTAKNPEIFFEELSDL-----FNQPEHRITNDYENFPFELQPELTIDELWPSQP-IEQ

Query:  LQEWESFSCNYNAE
         +  E   C+++ E
Subjt:  LQEWESFSCNYNAE

AT1G64620.1 Dof-type zinc finger DNA-binding family protein8.5e-2968.29Show/hide
Query:  PPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSST
        PP  A  ++RK +P  ++A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGGG RK +RS S++SS+
Subjt:  PPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSST

AT2G28510.1 Dof-type zinc finger DNA-binding family protein1.6e-2782.81Show/hide
Query:  KAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSS
        +A NCPRC S NTKFCYYNNYSLSQPRYFCKSCRRYWTKGG+LRNVPVGGGCR+ +RS SS  S
Subjt:  KAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSS

AT3G52440.1 Dof-type zinc finger DNA-binding family protein1.3e-3260.19Show/hide
Query:  WKP----HLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSRSDIDLAAVF
        W+P    + E  P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGGGCRK+RR KSS+ +    ++ +           IDLA V+
Subjt:  WKP----HLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPSSRSDIDLAAVF

Query:  AKFLNTPP
        A FLN  P
Subjt:  AKFLNTPP

AT4G24060.1 Dof-type zinc finger DNA-binding family protein1.6e-2746.15Show/hide
Query:  LPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEP
        L P  PP      +RK +P  ++A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT+GGSLRN+PVGGG RK +RS SS+S               
Subjt:  LPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEP

Query:  SSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPS-NNLTAKNPEIFFEELSDL
        ++ SD           +T P+TK H+S         S   LT +NP+       DL
Subjt:  SSRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPS-NNLTAKNPEIFFEELSDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGATCACCACCAGATCTCCCATCTTCCTCCGCCGACGCCGCCGCCGTTCGCCGCCCATCTCCAACGGAAATGGAAGCCCCATCTCGAAAAAGCCCCCAATTGCCC
CCGCTGCGCCTCCGCCAACACCAAATTCTGTTATTACAACAACTACAGCCTCTCCCAGCCTCGTTACTTCTGTAAATCCTGCCGCCGTTACTGGACCAAAGGCGGCTCCC
TCCGCAACGTCCCCGTCGGCGGCGGCTGCCGCAAGACCCGCCGTTCCAAATCCTCAACCTCCTCCACTATCTTACCCAACGTAATTTCAACCCAAATTACCGAACCCTCT
TCCCGATCCGATATTGATCTTGCTGCCGTTTTCGCTAAATTTTTAAACACCCCACCGAGCACAAAGTCCCATGTATCGACCAGCTCCCCGGAATCGACTGACCCATCAAA
CAATCTAACAGCGAAGAATCCCGAGATCTTCTTCGAAGAGCTATCCGATTTATTCAATCAACCCGAACATCGGATTACAAACGACTATGAAAATTTCCCATTTGAGTTAC
AACCCGAACTAACCATTGATGAACTATGGCCATCGCAACCGATCGAACAACTTCAAGAATGGGAATCTTTCTCGTGCAATTACAACGCGGAATTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGATCACCACCAGATCTCCCATCTTCCTCCGCCGACGCCGCCGCCGTTCGCCGCCCATCTCCAACGGAAATGGAAGCCCCATCTCGAAAAAGCCCCCAATTGCCC
CCGCTGCGCCTCCGCCAACACCAAATTCTGTTATTACAACAACTACAGCCTCTCCCAGCCTCGTTACTTCTGTAAATCCTGCCGCCGTTACTGGACCAAAGGCGGCTCCC
TCCGCAACGTCCCCGTCGGCGGCGGCTGCCGCAAGACCCGCCGTTCCAAATCCTCAACCTCCTCCACTATCTTACCCAACGTAATTTCAACCCAAATTACCGAACCCTCT
TCCCGATCCGATATTGATCTTGCTGCCGTTTTCGCTAAATTTTTAAACACCCCACCGAGCACAAAGTCCCATGTATCGACCAGCTCCCCGGAATCGACTGACCCATCAAA
CAATCTAACAGCGAAGAATCCCGAGATCTTCTTCGAAGAGCTATCCGATTTATTCAATCAACCCGAACATCGGATTACAAACGACTATGAAAATTTCCCATTTGAGTTAC
AACCCGAACTAACCATTGATGAACTATGGCCATCGCAACCGATCGAACAACTTCAAGAATGGGAATCTTTCTCGTGCAATTACAACGCGGAATTTTTGTGA
Protein sequenceShow/hide protein sequence
MSDHHQISHLPPPTPPPFAAHLQRKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTILPNVISTQITEPS
SRSDIDLAAVFAKFLNTPPSTKSHVSTSSPESTDPSNNLTAKNPEIFFEELSDLFNQPEHRITNDYENFPFELQPELTIDELWPSQPIEQLQEWESFSCNYNAEFL