; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G025590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G025590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionBasic-leucine zipper (bZIP) transcription factor family protein
Genome locationCmo_Chr04:18754570..18755305
RNA-Seq ExpressionCmoCh04G025590
SyntenyCmoCh04G025590
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602180.1 Transcription factor VIP1, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3797.73Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ
        ++QRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ

XP_008441523.1 PREDICTED: transcription factor VIP1-like [Cucumis melo]6.5e-3086.21Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQ
        ++QRDTT LTTENRELKLRLQAMEQQA LRDALNETL+EEVQRLKIAAAQLPVANG+SFN+GGG LPPQF  LQ SL QFGNSQNHQ
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQ

XP_022956511.1 transcription factor VIP1-like [Cucurbita moschata]2.5e-3797.73Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ
        ++QRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ

XP_022990404.1 transcription factor VIP1-like [Cucurbita maxima]2.5e-3797.73Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ
        ++QRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ

XP_023548041.1 transcription factor VIP1-like [Cucurbita pepo subsp. pepo]2.5e-3797.73Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ
        ++QRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ

TrEMBL top hitse value%identityAlignment
A0A0A0KBC6 BZIP domain-containing protein7.8e-2985.23Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ
        ++QRDTT LTTENRELKLRLQAMEQQA LRDALNETL+EEVQRLKIAAAQLPVANG+SFN+GGG LPPQF  LQ S  QFGNSQNHQQ
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ

A0A1S3B3P0 transcription factor VIP1-like3.2e-3086.21Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQ
        ++QRDTT LTTENRELKLRLQAMEQQA LRDALNETL+EEVQRLKIAAAQLPVANG+SFN+GGG LPPQF  LQ SL QFGNSQNHQ
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQ

A0A5A7UMX9 Transcription factor VIP1-like3.2e-3086.21Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQ
        ++QRDTT LTTENRELKLRLQAMEQQA LRDALNETL+EEVQRLKIAAAQLPVANG+SFN+GGG LPPQF  LQ SL QFGNSQNHQ
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQ

A0A6J1GWS4 transcription factor VIP1-like1.2e-3797.73Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ
        ++QRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ

A0A6J1JRY6 transcription factor VIP1-like1.2e-3797.73Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ
        ++QRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ

SwissProt top hitse value%identityAlignment
O22873 bZIP transcription factor 184.1e-1150Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGAL----PPQFHTLQPSLHQFGNSQNHQQ
        + QRDTT L++EN ELKLRLQ MEQQA+LRDALNE LK+EV+RLK A  +  V+   ++N+G   +     PQ    Q    Q  ++QN QQ
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGAL----PPQFHTLQPSLHQFGNSQNHQQ

Q04088 Probable transcription factor PosF211.3e-0946.32Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGG-GALPPQFHTLQPSLH------QFGNSQNHQQ
        ++QRDT  LT EN ELKLRLQ MEQQ  L+D LNE LKEE+Q LK+   Q+     S+ N G  G+   QF++   S+       QF   Q H Q
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGG-GALPPQFHTLQPSLH------QFGNSQNHQQ

Q69IL4 Transcription factor RF2a8.9e-1454.76Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQ
        ++QRDT+ LTTEN ELKLRLQ MEQQ  L+DALN+TLK EVQRLK+A  Q+  ANG    +  G +P          HQFG +Q
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQ

Q6S4P4 Transcription factor RF2b6.4e-1243.43Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVAN----------------------GSSFNIGGGALPPQFHTLQPSL
        + QRDTT L+ EN ELK+RLQAMEQQAQLRDALN+ LK+E++RLK+A  ++  +N                       ++   GG  LPPQF   +P++
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVAN----------------------GSSFNIGGGALPPQFHTLQPSL

Q9MA75 Transcription factor VIP16.6e-1752.87Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQ
        M+QR T+EL TEN+ LK+RLQA+EQQA+LRDALNE L++E+ RLK+ A ++P  NG+S+N        QF + Q +++QFGN  N Q
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQ

Arabidopsis top hitse value%identityAlignment
AT1G06070.1 Basic-leucine zipper (bZIP) transcription factor family protein2.7e-1350Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ
        ++QRDT  L  EN ELKLR+Q MEQQ  L+DALN+ LKEEVQ LK+   Q P +NG+S N G      QF+    S+H    +Q  QQ
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ

AT1G06850.1 basic leucine-zipper 521.9e-1158.06Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIG
        + QRDT  L  EN ELKLRLQAMEQQAQLR+ALNE L++EV+R+K+   ++   N  SF++G
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIG

AT1G43700.1 VIRE2-interacting protein 14.7e-1852.87Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQ
        M+QR T+EL TEN+ LK+RLQA+EQQA+LRDALNE L++E+ RLK+ A ++P  NG+S+N        QF + Q +++QFGN  N Q
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQ

AT2G31370.3 Basic-leucine zipper (bZIP) transcription factor family protein9.5e-1146.32Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGG-GALPPQFHTLQPSLH------QFGNSQNHQQ
        ++QRDT  LT EN ELKLRLQ MEQQ  L+D LNE LKEE+Q LK+   Q+     S+ N G  G+   QF++   S+       QF   Q H Q
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGG-GALPPQFHTLQPSLH------QFGNSQNHQQ

AT2G40620.1 Basic-leucine zipper (bZIP) transcription factor family protein2.9e-1250Show/hide
Query:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGAL----PPQFHTLQPSLHQFGNSQNHQQ
        + QRDTT L++EN ELKLRLQ MEQQA+LRDALNE LK+EV+RLK A  +  V+   ++N+G   +     PQ    Q    Q  ++QN QQ
Subjt:  MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGAL----PPQFHTLQPSLHQFGNSQNHQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAGAGAGATACCACTGAATTGACTACTGAAAACAGAGAGCTTAAACTAAGGCTGCAGGCCATGGAGCAACAGGCCCAACTCAGAGATGCACTGAACGAGACATT
GAAGGAGGAAGTGCAACGGCTGAAGATAGCTGCAGCTCAATTGCCTGTTGCAAATGGCAGCTCGTTCAACATTGGAGGAGGGGCGCTACCCCCTCAATTCCATACTCTCC
AGCCATCCTTGCATCAGTTTGGCAACTCTCAGAATCATCAACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCAGAGAGATACCACTGAATTGACTACTGAAAACAGAGAGCTTAAACTAAGGCTGCAGGCCATGGAGCAACAGGCCCAACTCAGAGATGCACTGAACGAGACATT
GAAGGAGGAAGTGCAACGGCTGAAGATAGCTGCAGCTCAATTGCCTGTTGCAAATGGCAGCTCGTTCAACATTGGAGGAGGGGCGCTACCCCCTCAATTCCATACTCTCC
AGCCATCCTTGCATCAGTTTGGCAACTCTCAGAATCATCAACAGTAATAGCTACTGCTGCTATGATGCTCCACCATCGCAGCTTCTCGGAGCATAACCAGCCACTCCCGG
TCAGTTATCGATTCTCCTGGAATGGCTTTTCCTCTTTTCCTGAGTAACATCTTCAGCTAATCCATTACTTGATATTAGTAATATTTTATTTCGAAAGCTAAGGAATTGTA
GCAGCATGTGTCTTCTACATTTGAATTTGTATTGAGTATATTTGTAAAAACAAACAAATACATGTGTATAGAAGCTGTATTATCTCTTTGATGATTGAGGATTGTATTGT
ACTACCACTCAGCAAATAATAGGGCCTCTCTTCTTTATGAGCGACCAAATCATATTTCTTGTTATGAACGAGCTGTTCTCCTCATCTAATATCAAGTTCCCTG
Protein sequenceShow/hide protein sequence
MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFNIGGGALPPQFHTLQPSLHQFGNSQNHQQ