; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G025720 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G025720
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionlight-harvesting complex-like protein OHP2, chloroplastic
Genome locationCmo_Chr04:18826031..18828196
RNA-Seq ExpressionCmoCh04G025720
SyntenyCmoCh04G025720
Gene Ontology termsGO:0006850 - mitochondrial pyruvate transmembrane transport (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0031305 - integral component of mitochondrial inner membrane (cellular component)
GO:0016301 - kinase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0050833 - pyruvate transmembrane transporter activity (molecular function)
InterPro domainsIPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032876.1 Light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]9.3e-9099.47Show/hide
Query:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQPSG
        MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQ SG
Subjt:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQPSG

Query:  KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
        KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
Subjt:  KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD

XP_022963822.1 light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita moschata]1.1e-90100Show/hide
Query:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQPSG
        MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQPSG
Subjt:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQPSG

Query:  KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
        KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
Subjt:  KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD

XP_022990469.1 light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita maxima]2.5e-8796.84Show/hide
Query:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQPSG
        MSGACSFPFAKIKIPTVSSSSAAVSPSASA SSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKP P+SATAP +QPS 
Subjt:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQPSG

Query:  KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
        KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
Subjt:  KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD

XP_022993308.1 light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita maxima]1.0e-7285.57Show/hide
Query:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPP---PPLKP-PPSSATAPVA
        MSGACS PFAKIKIP  SSS A  SPSASA SS SSSSAHSSIRFSSSKPFVFTIRSSQT+GP+RRPAAPSLREPSPPSPP   PPLKP PPSS T    
Subjt:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPP---PPLKP-PPSSATAPVA

Query:  QPSGKAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
         P   AY AK DN ITLEFQRQKAKELQEYFKQKKLDE DQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDL+
Subjt:  QPSGKAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD

XP_023535438.1 light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita pepo subsp. pepo]1.5e-7992.11Show/hide
Query:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQPSG
        MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAH+SIRFSSSKPFVFTIR SQTDGPIRRPAAPSLREPS     PPLKP       PVAQPS 
Subjt:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQPSG

Query:  KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
        KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
Subjt:  KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD

TrEMBL top hitse value%identityAlignment
A0A1S3B3J8 proline-rich receptor-like protein kinase PERK144.5e-6678.28Show/hide
Query:  MSGACSFPFAKIKIPTVSSSSA----AVSPSASAASSTSSSSA-HSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPP---PPLKPPPSSAT
        MSGACS PFA IKIP+ SSS A    A SPSASA+SS SSSS+ HSS+RF SSKPF+FTIRSSQT+GP+RRP+APSLR+PSPPSPP   PPLKP P S +
Subjt:  MSGACSFPFAKIKIPTVSSSSA----AVSPSASAASSTSSSSA-HSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPP---PPLKPPPSSAT

Query:  APVAQPSGKAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
         P       + V KQDN ITLEFQR KAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGI+DL+
Subjt:  APVAQPSGKAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD

A0A6J1FIC8 light-harvesting complex-like protein OHP2, chloroplastic1.1e-7284.46Show/hide
Query:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPP---PPLKPPPSSATAPVAQ
        MSGACS PFAKIKIP  SSS A  SPSASA SS SSSSAHSSIRFSS+KPFVFTIRSSQT+GP+RRPAAPSLREPSPPSPP   PPLKP P     P   
Subjt:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPP---PPLKPPPSSATAPVAQ

Query:  PSGKAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
        P   AY AK DN ITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDL+
Subjt:  PSGKAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD

A0A6J1HG91 light-harvesting complex-like protein OHP2, chloroplastic5.3e-91100Show/hide
Query:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQPSG
        MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQPSG
Subjt:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQPSG

Query:  KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
        KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
Subjt:  KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD

A0A6J1JS47 light-harvesting complex-like protein OHP2, chloroplastic1.2e-8796.84Show/hide
Query:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQPSG
        MSGACSFPFAKIKIPTVSSSSAAVSPSASA SSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKP P+SATAP +QPS 
Subjt:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQPSG

Query:  KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
        KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
Subjt:  KAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD

A0A6J1K1U3 light-harvesting complex-like protein OHP2, chloroplastic5.0e-7385.57Show/hide
Query:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPP---PPLKP-PPSSATAPVA
        MSGACS PFAKIKIP  SSS A  SPSASA SS SSSSAHSSIRFSSSKPFVFTIRSSQT+GP+RRPAAPSLREPSPPSPP   PPLKP PPSS T    
Subjt:  MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPP---PPLKP-PPSSATAPVA

Query:  QPSGKAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
         P   AY AK DN ITLEFQRQKAKELQEYFKQKKLDE DQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDL+
Subjt:  QPSGKAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD

SwissProt top hitse value%identityAlignment
Q9FEC1 Light-harvesting complex-like protein OHP2, chloroplastic1.0e-4367.07Show/hide
Query:  ASSTSSSSAHSSIRFS-SSKPFVFTIRSSQTDGPIRRPAA-PSLREPSPPSPP--PPLKPPPSSATAPVAQPSGKAYVAKQDNTITLEFQRQKAKELQEY
        +SS+SSS+A SS RFS ++KP VF IR SQT+GP+RRP+A P+LREP  P PP  P   PPPS        P  KA      +  T+EFQRQKAKELQEY
Subjt:  ASSTSSSSAHSSIRFS-SSKPFVFTIRSSQTDGPIRRPAA-PSLREPSPPSPP--PPLKPPPSSATAPVAQPSGKAYVAKQDNTITLEFQRQKAKELQEY

Query:  FKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
        FKQKKL+ A QGPFFGF  KNEISNGRWAMFGFAVG+LTEYATGS+ VDQVKILLSNFGI+DL+
Subjt:  FKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD

Arabidopsis top hitse value%identityAlignment
AT1G34000.1 one-helix protein 27.4e-4567.07Show/hide
Query:  ASSTSSSSAHSSIRFS-SSKPFVFTIRSSQTDGPIRRPAA-PSLREPSPPSPP--PPLKPPPSSATAPVAQPSGKAYVAKQDNTITLEFQRQKAKELQEY
        +SS+SSS+A SS RFS ++KP VF IR SQT+GP+RRP+A P+LREP  P PP  P   PPPS        P  KA      +  T+EFQRQKAKELQEY
Subjt:  ASSTSSSSAHSSIRFS-SSKPFVFTIRSSQTDGPIRRPAA-PSLREPSPPSPP--PPLKPPPSSATAPVAQPSGKAYVAKQDNTITLEFQRQKAKELQEY

Query:  FKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD
        FKQKKL+ A QGPFFGF  KNEISNGRWAMFGFAVG+LTEYATGS+ VDQVKILLSNFGI+DL+
Subjt:  FKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGGGCCTGTTCATTCCCCTTTGCCAAAATCAAAATCCCCACCGTTTCCTCGTCGTCGGCGGCCGTTTCTCCGTCGGCTTCGGCTGCCAGTTCCACTTCTTCATC
GTCCGCTCACAGTTCCATCAGATTCTCCTCCTCCAAACCTTTTGTCTTCACCATTCGGAGCTCTCAGACCGACGGCCCTATCAGGAGACCGGCGGCTCCTTCTCTGAGAG
AGCCGTCGCCGCCTTCGCCGCCGCCTCCTCTCAAGCCGCCTCCTTCTTCGGCGACGGCTCCTGTTGCTCAGCCGTCGGGGAAGGCGTATGTTGCAAAACAGGATAATACG
ATCACTTTAGAGTTTCAGAGGCAGAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAGGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAA
TGAAATTTCTAATGGCAGGTGGGCAATGTTTGGTTTTGCTGTTGGATTGCTGACAGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTCCTTTCAAATT
TTGGGATAGTTGATCTCGATTGA
mRNA sequenceShow/hide mRNA sequence
GGCTTGTATTCTTCTGAAACTTGGCCACATCGTATCCACACCAAACACATCCACTCGATTTTGACTTCAATTCCTCTAATCCGAATCCATTTCAGTTCCACAAGAATCTG
ATAGAGAAATTTCAGAGATACAAGGCGAAATGTCGGGGGCCTGTTCATTCCCCTTTGCCAAAATCAAAATCCCCACCGTTTCCTCGTCGTCGGCGGCCGTTTCTCCGTCG
GCTTCGGCTGCCAGTTCCACTTCTTCATCGTCCGCTCACAGTTCCATCAGATTCTCCTCCTCCAAACCTTTTGTCTTCACCATTCGGAGCTCTCAGACCGACGGCCCTAT
CAGGAGACCGGCGGCTCCTTCTCTGAGAGAGCCGTCGCCGCCTTCGCCGCCGCCTCCTCTCAAGCCGCCTCCTTCTTCGGCGACGGCTCCTGTTGCTCAGCCGTCGGGGA
AGGCGTATGTTGCAAAACAGGATAATACGATCACTTTAGAGTTTCAGAGGCAGAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAGGCTGATCAG
GGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGCAGGTGGGCAATGTTTGGTTTTGCTGTTGGATTGCTGACAGAGTATGCAACTGGTTCAAACTTTGT
TGATCAAGTAAAGATCCTCCTTTCAAATTTTGGGATAGTTGATCTCGATTGACACGATGAACAAGGTCCATGTTTAATTTTTAATGTATCTACATCTTGTAATTCATTTC
ATAGTGTTCTTGAGATTCGTTGTTTGATACACCAATTGCCATTCAAGTTTGTGCTCCTTGCAATGCTTACTGTTCTTCTGTTTATATATAAAGTTCTTTCTTAGTTATTT
ATCGGAGAGATTATAATCCATCTCGAAAATATGATAGATTGTCTTATTTTTGTCGATAATAATATCGATAAATGTTGTATTTCTAGTTGCCTACCTTGAAATTTAGATGC
ACGGATCAAAATGTGATGCAGTGG
Protein sequenceShow/hide protein sequence
MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQTDGPIRRPAAPSLREPSPPSPPPPLKPPPSSATAPVAQPSGKAYVAKQDNT
ITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD