; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G025890 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G025890
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionWD repeat protein
Genome locationCmo_Chr04:18921100..18924716
RNA-Seq ExpressionCmoCh04G025890
SyntenyCmoCh04G025890
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602211.1 hypothetical protein SDJN03_07444, partial [Cucurbita argyrosperma subsp. sororia]4.6e-10096.43Show/hide
Query:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQS SEIREIEETSSNSEL+ LLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYR GAEIYIDGEPKDSLIKPVT IVFVVAIITIMITLLSTSR+SQGWMK LNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_008456707.1 PREDICTED: uncharacterized protein LOC103496571 [Cucumis melo]1.3e-9189.58Show/hide
Query:  QSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSE+EIRE++ET+S SELQPLL++QNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSILTYR GAEI+IDGEPKDSLIKPVT I+F VAIITI+IT L  SR SQGWMK LNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  NGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_022960369.1 uncharacterized protein LOC111461110 [Cucurbita moschata]6.2e-105100Show/hide
Query:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_022990468.1 uncharacterized protein LOC111487320 [Cucurbita maxima]1.9e-10196.94Show/hide
Query:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNS+TVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYR GAEIYIDGEPKDSLIKPVT IVFVVAIITI+ITLLSTSR+SQGWMK LNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_023518857.1 uncharacterized protein LOC111782248 [Cucurbita pepo subsp. pepo]4.6e-10096.43Show/hide
Query:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQSESEIREIEETSSNSELQPLLQS N SSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYR GAEIYIDGEPKDSLIKPVT IVF VAIITIMITLLSTSR+SQGWMK LNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

TrEMBL top hitse value%identityAlignment
A0A0A0K9G4 Uncharacterized protein1.2e-9088.02Show/hide
Query:  QSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSESEIRE+EET+S SELQPLL++ NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSILTYR GAEI+IDGEPKDSLIKPVT I+F VAIITI+IT L  SR SQGWMK LNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  NGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

A0A1S3C3V7 uncharacterized protein LOC1034965716.5e-9289.58Show/hide
Query:  QSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSE+EIRE++ET+S SELQPLL++QNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSILTYR GAEI+IDGEPKDSLIKPVT I+F VAIITI+IT L  SR SQGWMK LNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  NGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

A0A6J1BYH2 uncharacterized protein LOC1110067357.4e-8886.15Show/hide
Query:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        ME+ Q+ESEIREIEET SNSE QPLLQSQNPSS+SK VKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLE+REILDKYGFKS FAFKP++GRGVPIR
Subjt:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYG
        FNPRNGRSILTYR GAEIYIDGEPKDSLIKP+T I+F VAI+TI+IT L  SR SQG MK LNI+GNFPPWILACVVIVFTRSRKRTRDLLKK+G
Subjt:  FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYG

A0A6J1HAT7 uncharacterized protein LOC1114611103.0e-105100Show/hide
Query:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

A0A6J1JTD1 uncharacterized protein LOC1114873209.0e-10296.94Show/hide
Query:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNS+TVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYR GAEIYIDGEPKDSLIKPVT IVFVVAIITI+ITLLSTSR+SQGWMK LNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71780.1 unknown protein1.8e-6262.23Show/hide
Query:  REIEETSSNSELQPLLQSQNPSS--NSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRS
        +EIEET+      PLL++  P S   S T   KVPEVEIHLY+ GKGPIDVFKS+LGG+EQDQLEVR IL+KYG K++FAF  + GR VPIRF+PRNGRS
Subjt:  REIEETSSNSELQPLLQSQNPSS--NSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRS

Query:  ILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        +L YR GA IYIDGEP+DSL+KP+T I+  V I+T++IT L   +    W+K     G FPPW+LAC+VIVFTR+RKRTRD  KKYGW
Subjt:  ILTYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCACCAGAGCGAGAGCGAAATCCGTGAAATTGAAGAAACCAGCTCGAACTCAGAGCTGCAACCTCTTCTTCAGAGCCAGAACCCGAGTTCGAATTCCAAAAC
AGTGAAAACGAAGGTTCCGGAGGTTGAGATCCATCTTTATCGGCAGGGCAAAGGTCCGATCGATGTGTTTAAATCAAGCCTTGGGGGTTGGGAACAAGACCAGCTCGAGG
TCCGAGAGATTCTCGATAAATACGGCTTCAAAAGCGTTTTCGCCTTCAAACCTGACTCCGGTCGTGGCGTCCCGATTCGATTCAACCCTAGAAATGGTAGGTCTATATTG
ACTTACAGAGGTGGAGCCGAAATTTACATCGACGGAGAGCCTAAGGATTCCCTGATCAAACCCGTAACCGGGATAGTTTTTGTCGTGGCAATTATTACCATTATGATAAC
GCTTCTCTCGACCTCAAGAAGCTCACAGGGATGGATGAAGACACTAAACATCACTGGGAACTTCCCTCCTTGGATTCTTGCTTGCGTCGTTATCGTCTTCACACGCTCGA
GGAAGAGAACTAGGGACTTACTGAAGAAGTACGGTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ACGATATTTTATTTTAGCTGGTTGGAACAAATAAAATCCATTACCGTACATCAAAAACATTGCGCGAAATGGAGGATCACCAGAGCGAGAGCGAAATCCGTGAAATTGAA
GAAACCAGCTCGAACTCAGAGCTGCAACCTCTTCTTCAGAGCCAGAACCCGAGTTCGAATTCCAAAACAGTGAAAACGAAGGTTCCGGAGGTTGAGATCCATCTTTATCG
GCAGGGCAAAGGTCCGATCGATGTGTTTAAATCAAGCCTTGGGGGTTGGGAACAAGACCAGCTCGAGGTCCGAGAGATTCTCGATAAATACGGCTTCAAAAGCGTTTTCG
CCTTCAAACCTGACTCCGGTCGTGGCGTCCCGATTCGATTCAACCCTAGAAATGGTAGGTCTATATTGACTTACAGAGGTGGAGCCGAAATTTACATCGACGGAGAGCCT
AAGGATTCCCTGATCAAACCCGTAACCGGGATAGTTTTTGTCGTGGCAATTATTACCATTATGATAACGCTTCTCTCGACCTCAAGAAGCTCACAGGGATGGATGAAGAC
ACTAAACATCACTGGGAACTTCCCTCCTTGGATTCTTGCTTGCGTCGTTATCGTCTTCACACGCTCGAGGAAGAGAACTAGGGACTTACTGAAGAAGTACGGTTGGTGAA
TCTCATTCTCCAGGCCTTCCTATGTTGATTACGGCAGGTAAAATCAATGTGTTATGTTGATTATTGTTTCTTGATTTGAAACCTTGGAAATAGAAGATAATGATACAATA
CAAATGGAACGTTCTTGGTCCATTGCTATCATAAATTCCCTGCCTGGATCTGATCTTTTGACGTGCCAAGGGTTTTTAATTAGGTTGAGTGACACATTTCATTAATTTGA
GTTATTATATAGTTTGGATTTATGTGTATAACTTGTTTGTCATAACTTCAATTCACAATCTTAAACCTTCTCTTGCTCGTTTAAACTCGACTTACATAATTAGCC
Protein sequenceShow/hide protein sequence
MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSKTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSIL
TYRGGAEIYIDGEPKDSLIKPVTGIVFVVAIITIMITLLSTSRSSQGWMKTLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW