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CmoCh04G026060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G026060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCCamK
Genome locationCmo_Chr04:19002799..19005557
RNA-Seq ExpressionCmoCh04G026060
SyntenyCmoCh04G026060
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032908.1 hypothetical protein SDJN02_06958, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-27100Show/hide
Query:  LRRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSGRVALSPFAHLLIA
        LRRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSGRVALSPFAHLLIA
Subjt:  LRRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSGRVALSPFAHLLIA
XP_008456659.1 PREDICTED: uncharacterized protein LOC103496546 isoform X1 [Cucumis melo]2.7e-2290Show/hide
Query:  RRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSGRVALSPFAHLLIAR
        RRASSP E  RLENPQS SRMSIVPSRLLSKRSK+RGARGISEDIFIAFSTSSNSGRVALSPFAHL I R
Subjt:  RRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSGRVALSPFAHLLIAR
TrEMBL top hitse value%identityAlignment
A0A0A9BTC5 CCamK9.5e-1369.7Show/hide
Query:  RRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSGRVALSPFAHL
        RRASSP E  RLE+P   S MS VPSRLLS +S  RGARGISE IFIAFSTSSNS  VA SP  H+
Subjt:  RRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSGRVALSPFAHL
A0A1S3C3D6 uncharacterized protein LOC103496546 isoform X11.3e-2290Show/hide
Query:  RRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSGRVALSPFAHLLIAR
        RRASSP E  RLENPQS SRMSIVPSRLLSKRSK+RGARGISEDIFIAFSTSSNSGRVALSPFAHL I R
Subjt:  RRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSGRVALSPFAHLLIAR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTGCATTCAATGTTGGAGGGAGGCCAAAAAGTTTTGAGGTTTAATGATGATTTGAATGGAACTGGCGTCCTGCGAAGAGCATCATCGCCTTGTGAGTTACGAAG
GCTCGAAAATCCACAAAGTAACTCGCGCATGTCAATTGTTCCATCCCGGTTATTGTCAAAGAGGTCGAAAATTCGAGGTGCAAGAGGGATAAGTGAAGACATATTCATTG
CTTTCAGCACCTCTTCAAATTCAGGAAGAGTAGCATTGTCCCCTTTTGCACATCTGCTTATTGCAAGGTGTGAGATCATAAGACCCCAACAAAGATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTGCATTCAATGTTGGAGGGAGGCCAAAAAGTTTTGAGGTTTAATGATGATTTGAATGGAACTGGCGTCCTGCGAAGAGCATCATCGCCTTGTGAGTTACGAAG
GCTCGAAAATCCACAAAGTAACTCGCGCATGTCAATTGTTCCATCCCGGTTATTGTCAAAGAGGTCGAAAATTCGAGGTGCAAGAGGGATAAGTGAAGACATATTCATTG
CTTTCAGCACCTCTTCAAATTCAGGAAGAGTAGCATTGTCCCCTTTTGCACATCTGCTTATTGCAAGGTGTGAGATCATAAGACCCCAACAAAGATCTTAGCTTTTTTGT
CCTCAATAAAATCGTGCTGCTCCATACGCTAGCTATCGCTGCAGCTCGAAGCTTGCGTCGGGCATTGAAACTCTTAAGTCGTGATACAATCTCAGCATCCATTTGATCTT
GCTTGGCTGAATTACCCATGACCCATGGATGCTCTAGAAGCTGTGTCATGAAATTTGTTAGGCTCACAAGCAATCCAGCAAATTACACTAAGGCCAAGCCCCCTCGTACC
TCTTGGGCACTCGGTCTCCTCTGAGGATCAACTGTCAACAGACTCGAAATCAGTTGCCTAGCCGAAGAAGAAATCGTCTTCCAAGTTTTCTCATGGAAACTGAACTCTCC
CTGCATTCAACCAAAGATTCACAAAAGGAGCACATTTTCTTGCAAACAATCTAACATACAAGTTTATAGATTTGACAACATAATTGAAGATCACTTACAGCCATGATCAG
TTCATGTTTTTCTCGATTGGACCGAGCGATAAAAGAAAGGAGATTCCATTACATACCCTGAGAGAAGGATGTACAAAATCACTCCCAGAGACCACATATCACTTTTGGAG
GTTATTGTTCCTTGGGAAAGTGCTTCTGGTGAGACATAATCTATGGAACCAAACAATCCAACAACTGGGTCAGTGAAATCCTCCACAGAACTCAATCCAAAGTCCATGAT
TTTCAAGGAAGAGTCCTGGCTTTCGTCGAGGAAGAGACAGTTTTCGGGTTTCAAGTCACGGTGAATGATATTGACTTCATGAAGAGCCTTCAAACCACTAGCAATCTGTC
TCACAACTGCAGCAGCTTTAGCTTCAGTGTGTCTCGTCTGAGCCACGATCCTATCGAAAAGCTCGCCTCCAGAACAAAGCTCCAACACGAGGTGAACCCCGTTCGAATCT
TCATACACGTCGTAAAGATCAATCACATTTTCATGAGGAACCATGGAAGTCACACTCTTGAGAGCATTTCGATTTGGTGGACATCCCATGAAAGCTGATGGTCCAATTCT
TCTTAGTGTTTTAATAGCTACTTCCTTTTTCTCTCTTCTGGACTTACTGATACCTTTCCTGACTACTGAGAATCCTCCTCTCCCTATAACGTCCGATATCTCATACTCGT
CGGAGAGTTTTCGAGCTTGCTGTATCATTTTCGCTCGAAAATTTGATGAAGAAACCACCCAGGAGGGTGAAGAGAAGGAATCTGGGAATATTTGGTGGAAGAAAATTGAT
AAGGAAGAGGACAAGAGGTAGTTGAATGATGAGAGAAAAGGAAGAGGATTGGAATGAGGGACTTACATCATGAGAGTTGTGGATTAGTTATTAAAATTTGGATTGAAAAA
TGAGGCATTTTAGGGAATAAAGAAAGGAGAATAGGAGTTGGGGAAGAAAGACAAAACAAAGTCAATGTTTAACACTTCCCTCTGTTCGTAATTTATTCATTATTAGATGC
GAAGATTTGAAGATCGAAGTTGAGATTGTTTCATATGAACTTATTTCGAAAGAGATGTGAATTGAGATTTAATTCTCGG
Protein sequenceShow/hide protein sequence
MAVHSMLEGGQKVLRFNDDLNGTGVLRRASSPCELRRLENPQSNSRMSIVPSRLLSKRSKIRGARGISEDIFIAFSTSSNSGRVALSPFAHLLIARCEIIRPQQRS