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CmoCh04G026180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G026180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSHSP domain-containing protein
Genome locationCmo_Chr04:19079629..19080652
RNA-Seq ExpressionCmoCh04G026180
SyntenyCmoCh04G026180
Gene Ontology termsNA
InterPro domainsIPR008978 - HSP20-like chaperone


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646641.1 hypothetical protein Csa_005322 [Cucumis sativus]3.1e-0531.82Show/hide
Query:  MSRQVFGWD---EMDQQKENYTPKVDWKERKETNKEYYDMMIDFSGCSRNQLQISMSRELKTIDIMTTKKEG-YNIVRVNESIPIKNECSLDDVYASFVK
        MS Q+   D    + QQ + + P + ++E +E NK  + M +   G S+++L+I+++   + I +   K +G +NI R+NE + IK +C L+ V A    
Subjt:  MSRQVFGWD---EMDQQKENYTPKVDWKERKETNKEYYDMMIDFSGCSRNQLQISMSRELKTIDIMTTKKEG-YNIVRVNESIPIKNECSLDDVYASFVK

Query:  NDLIITFPKK
        + LI+TF K+
Subjt:  NDLIITFPKK

KAG6602241.1 hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sororia]8.6e-4887.16Show/hide
Query:  MSRQVFGWDEMDQQKENYTPKVDWKERKETNKEYYDMMIDFSGCSRNQLQISMSRELKTIDIMTTKKEGYNIVRVNESIPIKNECSLDDVYASFVKNDLI
        MSRQVFGWDEMDQQKENY P V+WKERKETNK+Y++M+IDFSGCSRNQLQISMSREL+TIDIMTTKKEGYNI RVNE+IPI+ ECSLD+VYASFV NDLI
Subjt:  MSRQVFGWDEMDQQKENYTPKVDWKERKETNKEYYDMMIDFSGCSRNQLQISMSRELKTIDIMTTKKEGYNIVRVNESIPIKNECSLDDVYASFVKNDLI

Query:  ITFPKKTNV
        ITFPKKTNV
Subjt:  ITFPKKTNV

KAG7016359.1 hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-0530.28Show/hide
Query:  MSRQVF--GWDEMDQQKENYTPKVDWKERKETNKEYYDMMIDFSGCSRNQLQISMSRELKTIDIMTTKKEG-YNIVRVNESIPIKNECSLDDVYASFVKN
        MS Q+    W ++ +  + ++P   W E + +      + +   G  +N+LQI+++   +T+ +   K++G +NI+R+NE I I + CSLD V+A    +
Subjt:  MSRQVF--GWDEMDQQKENYTPKVDWKERKETNKEYYDMMIDFSGCSRNQLQISMSRELKTIDIMTTKKEG-YNIVRVNESIPIKNECSLDDVYASFVKN

Query:  DLIITFPKK
         L +TF KK
Subjt:  DLIITFPKK

XP_022939359.1 uncharacterized protein LOC111445297 [Cucurbita moschata]8.2e-0631.19Show/hide
Query:  MSRQVF--GWDEMDQQKENYTPKVDWKERKETNKEYYDMMIDFSGCSRNQLQISMSRELKTIDIMTTKKEG-YNIVRVNESIPIKNECSLDDVYASFVKN
        MS Q+    W ++ +  + ++P   W E + +      + +   G  +NQLQI+++   +T+ +   K++G +NI+R+NE I I + CSLD V+A     
Subjt:  MSRQVF--GWDEMDQQKENYTPKVDWKERKETNKEYYDMMIDFSGCSRNQLQISMSRELKTIDIMTTKKEG-YNIVRVNESIPIKNECSLDDVYASFVKN

Query:  DLIITFPKK
         L +TF KK
Subjt:  DLIITFPKK

TrEMBL top hitse value%identityAlignment
A0A0A0KB53 SHSP domain-containing protein1.5e-0531.82Show/hide
Query:  MSRQVFGWD---EMDQQKENYTPKVDWKERKETNKEYYDMMIDFSGCSRNQLQISMSRELKTIDIMTTKKEG-YNIVRVNESIPIKNECSLDDVYASFVK
        MS Q+   D    + QQ + + P + ++E +E NK  + M +   G S+++L+I+++   + I +   K +G +NI R+NE + IK +C L+ V A    
Subjt:  MSRQVFGWD---EMDQQKENYTPKVDWKERKETNKEYYDMMIDFSGCSRNQLQISMSRELKTIDIMTTKKEG-YNIVRVNESIPIKNECSLDDVYASFVK

Query:  NDLIITFPKK
        + LI+TF K+
Subjt:  NDLIITFPKK

A0A6J1FGX8 uncharacterized protein LOC1114452974.0e-0631.19Show/hide
Query:  MSRQVF--GWDEMDQQKENYTPKVDWKERKETNKEYYDMMIDFSGCSRNQLQISMSRELKTIDIMTTKKEG-YNIVRVNESIPIKNECSLDDVYASFVKN
        MS Q+    W ++ +  + ++P   W E + +      + +   G  +NQLQI+++   +T+ +   K++G +NI+R+NE I I + CSLD V+A     
Subjt:  MSRQVF--GWDEMDQQKENYTPKVDWKERKETNKEYYDMMIDFSGCSRNQLQISMSRELKTIDIMTTKKEG-YNIVRVNESIPIKNECSLDDVYASFVKN

Query:  DLIITFPKK
         L +TF KK
Subjt:  DLIITFPKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGGCAAGTATTTGGTTGGGATGAAATGGATCAACAAAAGGAGAATTACACTCCAAAAGTGGATTGGAAAGAGAGAAAGGAAACAAATAAAGAGTACTATGATAT
GATGATCGATTTTTCGGGTTGTTCAAGGAATCAACTGCAAATCTCGATGAGTAGAGAATTAAAGACTATTGATATTATGACAACAAAAAAAGAAGGATACAATATCGTTC
GTGTCAACGAATCCATACCAATTAAGAACGAGTGCTCGTTGGATGATGTCTATGCATCGTTTGTTAAAAATGATCTTATTATTACATTCCCGAAGAAAACAAATGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATTCATTACACAAAATTAAATTATTTGAAGTTTTGAAGATTTTCAATGTCGAGGCAAGTATTTGGTTGGGATGAAATGGATCAACAAAAGGAGAATTACACTCCAAAAGT
GGATTGGAAAGAGAGAAAGGAAACAAATAAAGAGTACTATGATATGATGATCGATTTTTCGGGTTGTTCAAGGAATCAACTGCAAATCTCGATGAGTAGAGAATTAAAGA
CTATTGATATTATGACAACAAAAAAAGAAGGATACAATATCGTTCGTGTCAACGAATCCATACCAATTAAGAACGAGTGCTCGTTGGATGATGTCTATGCATCGTTTGTT
AAAAATGATCTTATTATTACATTCCCGAAGAAAACAAATGTTTAATTTCCATCCAAATCGAGATTTACTTTCTTAATGAATAAACACGGACTTCCTAGGTTTGTGTAAAA
CACTATATATACATACGTACACGTGCTATGTATTATTTTTATCAAATTTGATTATGTTATGGTCGGTGATATGTGAGAAACTCGAGTAGTTTGGAGTACGTGAAATCTCA
TGTGAATCAAGAAGGACCATCTTGCAAAGCTAAACACTTATGGTGACCGATGGTCTTCAGAACAGTAGGAAGAGGTAAGGACTCTGACCGTGTGCCTGTTGAAGAATGAG
TCGGTGACTCATAAGCAGTGGCTTGGTTAAGGGAACCTACTGTGAGAAACTACAAAATATATATATCTATATATATATATATATATGTAAATGTTTTCTATTGGCTTCAG
ATTCTCAAGCTCGTCTTGAGTTGCTTTTACGAGTGAAAATAATACGGAGTCTTTCAA
Protein sequenceShow/hide protein sequence
MSRQVFGWDEMDQQKENYTPKVDWKERKETNKEYYDMMIDFSGCSRNQLQISMSRELKTIDIMTTKKEGYNIVRVNESIPIKNECSLDDVYASFVKNDLIITFPKKTNV