CuGenDBv2

Gene ID	CmoCh04G026370
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	40S ribosomal protein S25
Genome location	Cmo_Chr04:19181392..19182907
RNA-Seq Expression	CmoCh04G026370
Synteny	CmoCh04G026370
Gene Ontology terms	GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR004977 - Ribosomal protein S25

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004140903.1 40S ribosomal protein S25-2 [Cucumis sativus]

8.5e-48

97.22

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL+TPSILSDRMR+NGSLARRAIKDLMARGSIRMISAHSSQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_008456601.1 PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo]

1.5e-47

97.22

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Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL+TPSILSDR+RINGSLARRAIKDLMARGSIRMISAHSSQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_022953196.1 40S ribosomal protein S25-2 [Cucurbita moschata]

2.2e-48

100

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Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_022990471.1 40S ribosomal protein S25-2-like [Cucurbita maxima]

5.0e-48

99.07

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Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLAR+AIKDLMARGSIRMISAHSSQE
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_038885543.1 40S ribosomal protein S25 [Benincasa hispida]

5.5e-47

96.3

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Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL+TPSILSDR+RINGSLARRAIKDLMARGSIRMISAH SQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KB40 40S ribosomal protein S25

4.1e-48

97.22

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL+TPSILSDRMR+NGSLARRAIKDLMARGSIRMISAHSSQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A5D3CKR9 40S ribosomal protein S25

7.1e-48

97.22

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL+TPSILSDR+RINGSLARRAIKDLMARGSIRMISAHSSQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A6J1BYI5 40S ribosomal protein S25

7.1e-48

97.22

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL+TPSILSDR+RINGSLARRAIKDLMARGSIRMISAHSSQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A6J1GMB9 40S ribosomal protein S25

1.1e-48

100

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Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A6J1JN15 40S ribosomal protein S25

2.4e-48

99.07

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLAR+AIKDLMARGSIRMISAHSSQE
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

SwissProt top hits

e value

%identity

Alignment

P46301 40S ribosomal protein S25

1.1e-45

87.96

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKLLSE PKYKLITPS+LSDR+RI+GSLAR+AI+DLMARGSIRM+SAH+SQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Q8GYL5 40S ribosomal protein S25-3

8.3e-46

88.79

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSE PK+KLITPSILSDR+RINGSLARRAI++LMA+G+IRM+SAHSSQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

Q9SIK2 40S ribosomal protein S25-2

3.4e-47

90.74

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+E PK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM+SAHSSQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Q9SIW5 40S ribosomal protein S25-1

1.3e-43

85.85

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Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+SE PK+KLITPSILSDR+RINGSLAR+AI+DLM +G+IRM+S HSSQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRAT
        I TRAT
Subjt:  IYTRAT

Q9T029 40S ribosomal protein S25-4

3.7e-46

88.89

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+E PK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM++AHSSQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Arabidopsis top hits

e value

%identity

Alignment

AT2G21580.1 Ribosomal protein S25 family protein

2.4e-48

90.74

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+E PK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM+SAHSSQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT2G21580.2 Ribosomal protein S25 family protein

1.3e-46

89.81

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQGTYDKLL+E PK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM+SAHSSQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT4G34555.1 Ribosomal protein S25 family protein

5.9e-47

88.79

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSE PK+KLITPSILSDR+RINGSLARRAI++LMA+G+IRM+SAHSSQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

AT4G39200.1 Ribosomal protein S25 family protein

2.7e-47

88.89

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+E PK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM++AHSSQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT4G39200.2 Ribosomal protein S25 family protein

1.5e-45

87.96

Show/hide

Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE
        MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL+E PK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM++AHSSQ+
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQE

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGCCTAAGAAGGATAAGGCTCCCCCGCCGTCCTCCAAGCCCGCTAAATCTGGTGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGCAAGCAAAAGGAGAAGGT
GAACAACATGGTTTTGTTTGATCAGGGAACCTATGATAAGCTTCTTTCTGAAGTTCCCAAGTACAAGCTAATCACTCCTTCAATCCTTTCTGATAGGATGAGGATCAACG
GTTCACTTGCCCGAAGAGCAATCAAGGATTTGATGGCTCGAGGTTCCATCAGAATGATCTCGGCTCATTCTAGTCAGGAGATATACACCAGAGCAACCAACACCTAA

mRNA sequence

Show/hide mRNA sequence

TTCCCTCCCGCCGAAACCTCTGTAACTCCTTCGCTGAAAGCCCTAGAAATCAGTTCTCATGGCGCCTAAGAAGGATAAGGCTCCCCCGCCGTCCTCCAAGCCCGCTAAAT
CTGGTGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGCAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTTGATCAGGGAACCTATGATAAGCTTCTTTCTGAA
GTTCCCAAGTACAAGCTAATCACTCCTTCAATCCTTTCTGATAGGATGAGGATCAACGGTTCACTTGCCCGAAGAGCAATCAAGGATTTGATGGCTCGAGGTTCCATCAG
AATGATCTCGGCTCATTCTAGTCAGGAGATATACACCAGAGCAACCAACACCTAAACATAATTGATCTCACTCGTGCCCGGAAGGGTATATAGATGTGTAGCTGCCTTTG
CATTTTTGCAATTCCAAATTTTGTTCAGCGAAGAGATTAGATTTTGGTTTGTTAAAATGGCTAGATGATCTCGAAATGTGACGTTTTAATTCGTTTTAGTGTTATTCTGC
CTTTGAATCCAGGATCCTCATTGAGTCACTTGGTTCTTATAATCGTGTTATTAGATCAGTTGTTTTAGCTTATTTCTAATCATAATGGTATTCGAAACAAAAACAAGTAT
GGGAAGAGAAAAGTGTTTTTGTAGATATGGTC

Protein sequence

Show/hide protein sequence

MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQEIYTRATNT

CmoCh04G026370 (gene) of Cucurbita moschata (Rifu) v1 genome