; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh04G026490 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh04G026490
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRING-H2 finger protein ATL74-like
Genome locationCmo_Chr04:19264028..19267628
RNA-Seq ExpressionCmoCh04G026490
SyntenyCmoCh04G026490
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602265.1 RING-H2 finger protein ATL7, partial [Cucurbita argyrosperma subsp. sororia]4.2e-11098.51Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADY+SEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL

Query:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT
        RILPYCGH FHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQAN AADPIENASSFT
Subjt:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT

Query:  EG
        EG
Subjt:  EG

KAG7032948.1 RING-H2 finger protein ATL7 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-11998.64Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADY+SEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL

Query:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT
        RILPYCGH FHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQAN AADPIENASSFT
Subjt:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT

Query:  EGNLNSKGSRNKNVVSPSNA
        EGNLNSKGSRNKNVVSPSNA
Subjt:  EGNLNSKGSRNKNVVSPSNA

XP_022960827.1 RING-H2 finger protein ATL74-like [Cucurbita moschata]1.1e-121100Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL

Query:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT
        RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT
Subjt:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT

Query:  EGNLNSKGSRNKNVVSPSNA
        EGNLNSKGSRNKNVVSPSNA
Subjt:  EGNLNSKGSRNKNVVSPSNA

XP_022990455.1 RING-H2 finger protein ATL74-like [Cucurbita maxima]7.7e-12098.64Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHL+ASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADY+SEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL

Query:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT
        RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT
Subjt:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT

Query:  EGNLNSKGSRNKNVVSPSNA
        EGNLNSKGSRNKNV SPSNA
Subjt:  EGNLNSKGSRNKNVVSPSNA

XP_023524777.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]1.5e-12099.09Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVC RLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADY+SEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL

Query:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT
        RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT
Subjt:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT

Query:  EGNLNSKGSRNKNVVSPSNA
        EGNLNSKGSRNKNVVSPSNA
Subjt:  EGNLNSKGSRNKNVVSPSNA

TrEMBL top hitse value%identityAlignment
A0A1S3C364 RING-H2 finger protein ATL8-like4.9e-9684.44Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSDLSGLERG HGVEP VVANFPTKKY+D+YFSSMRNAQCTVCLADY+SEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL

Query:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE-PIQENQ----ANGAADPIEN
        RILPYCGHSFHV CIDIWLH+HSTCPVCR SLREV DKKRT+QPLFSSAIRS   LNSD    PC GFPL D EN GLE PIQEN     ANGA DPIEN
Subjt:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE-PIQENQ----ANGAADPIEN

Query:  ASSFTEGNLNSKGSRNKNVVSPSNA
        AS F EGN NSKG RNKNV SPSNA
Subjt:  ASSFTEGNLNSKGSRNKNVVSPSNA

A0A5D3CKS4 RING-H2 finger protein ATL8-like4.9e-9684.44Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSDLSGLERG HGVEP VVANFPTKKY+D+YFSSMRNAQCTVCLADY+SEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL

Query:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE-PIQENQ----ANGAADPIEN
        RILPYCGHSFHV CIDIWLH+HSTCPVCR SLREV DKKRT+QPLFSSAIRS   LNSD    PC GFPL D EN GLE PIQEN     ANGA DPIEN
Subjt:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE-PIQENQ----ANGAADPIEN

Query:  ASSFTEGNLNSKGSRNKNVVSPSNA
        AS F EGN NSKG RNKNV SPSNA
Subjt:  ASSFTEGNLNSKGSRNKNVVSPSNA

A0A6J1BZK6 RING-H2 finger protein ATL38-like2.2e-9682.14Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL
        MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSD +GLERG HG+E F VANFPTKKYSDEYFSSMRNAQCTVCLADY+ ED+L
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL

Query:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQ----ANGAADPIENA
        RILPYCGHSFHV CIDIWLH+HSTCPVCR SLRE PDKKR +QPLFSSAIRSHY LNS+VC +PC GFPL D EN+GLEPIQEN     ANG AD  ENA
Subjt:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQ----ANGAADPIENA

Query:  SSFTEGNLNSKGSRNKNVVSPSNA
        SSF EGN  SKGSRNKN V  SNA
Subjt:  SSFTEGNLNSKGSRNKNVVSPSNA

A0A6J1H8I0 RING-H2 finger protein ATL74-like5.2e-122100Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL

Query:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT
        RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT
Subjt:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT

Query:  EGNLNSKGSRNKNVVSPSNA
        EGNLNSKGSRNKNVVSPSNA
Subjt:  EGNLNSKGSRNKNVVSPSNA

A0A6J1JQ55 RING-H2 finger protein ATL74-like3.7e-12098.64Show/hide
Query:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL
        MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHL+ASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADY+SEDLL
Subjt:  MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLL

Query:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT
        RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT
Subjt:  RILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFT

Query:  EGNLNSKGSRNKNVVSPSNA
        EGNLNSKGSRNKNV SPSNA
Subjt:  EGNLNSKGSRNKNVVSPSNA

SwissProt top hitse value%identityAlignment
O64762 RING-H2 finger protein ATL386.9e-1530.99Show/hide
Query:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFL---VASRSDLSGLERGQHGVEPFVVANFPTKKYSD--EYFSSMRNAQCTVCLADYNSEDLLRI
        LV+T+I F +  + +  VC R    + +   S   F    V SR+ ++ +     G++  ++ +FPT  YS+  E    +   +C VC+ ++   + LR+
Subjt:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFL---VASRSDLSGLERGQHGVEPFVVANFPTKKYSD--EYFSSMRNAQCTVCLADYNSEDLLRI

Query:  LPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQP
        +P C H FH  C+ +WL  HSTCP+CR  L   P ++  L P
Subjt:  LPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQP

P0C034 RING-H2 finger protein ATL102.0e-1435.66Show/hide
Query:  VSTLFIVFVCTRLVCARIHL---NASRRS--FLVASRSDLSGLERG--QHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHS
        V  L  + +C  + C  +H     A RRS  F+++         RG    G++   +  FP   YS E      + +C +CL+D+ S + LR+LP C H 
Subjt:  VSTLFIVFVCTRLVCARIHL---NASRRS--FLVASRSDLSGLERG--QHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHS

Query:  FHVTCIDIWLHRHSTCPVCRTSLREVPDK
        FHV CID WL +H TCP CR  L E   K
Subjt:  FHVTCIDIWLHRHSTCPVCRTSLREVPDK

Q8W571 RING-H2 finger protein ATL322.0e-1434.09Show/hide
Query:  TVIGFTVSTLFIVFVCTRLV--CARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSM--RNAQCTVCLADYNSEDLLRILPYC
        TV    V+  F+  + +  +  CAR + ++S R F   +R++     RG  G++  VV +FP   YS    S +  ++ +C +CL +    + +R+LP C
Subjt:  TVIGFTVSTLFIVFVCTRLV--CARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSM--RNAQCTVCLADYNSEDLLRILPYC

Query:  GHSFHVTCIDIWLHRHSTCPVCRTSLREVPDK
         H FH+ CID WL+ H+TCPVCR++L    +K
Subjt:  GHSFHVTCIDIWLHRHSTCPVCRTSLREVPDK

Q9C7I1 RING-H2 finger protein ATL344.5e-1437.38Show/hide
Query:  RGQHGVEPFVVANFPTKKYSDEYFSSM--RNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSH
        R   G+   V+ +FP+  YS      +     +C +CL ++  E+ LR++P C H+FH +CID+WL   STCPVCR SL   P K  + Q      IR H
Subjt:  RGQHGVEPFVVANFPTKKYSDEYFSSM--RNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSH

Query:  YNLNSDV
         N + D+
Subjt:  YNLNSDV

Q9LM69 RING-H2 finger protein ATL801.2e-1446.58Show/hide
Query:  GVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLHRHSTCPVCRTSL
        G++  V+ + P   +S E   S + A+C +CLA++++ D LR+LP CGH FHV CID WL  HS+CP CR  L
Subjt:  GVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLHRHSTCPVCRTSL

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein8.4e-1646.58Show/hide
Query:  GVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLHRHSTCPVCRTSL
        G++  V+ + P   +S E   S + A+C +CLA++++ D LR+LP CGH FHV CID WL  HS+CP CR  L
Subjt:  GVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLHRHSTCPVCRTSL

AT1G35330.1 RING/U-box superfamily protein3.2e-1537.38Show/hide
Query:  RGQHGVEPFVVANFPTKKYSDEYFSSM--RNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSH
        R   G+   V+ +FP+  YS      +     +C +CL ++  E+ LR++P C H+FH +CID+WL   STCPVCR SL   P K  + Q      IR H
Subjt:  RGQHGVEPFVVANFPTKKYSDEYFSSM--RNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSH

Query:  YNLNSDV
         N + D+
Subjt:  YNLNSDV

AT1G49220.1 RING/U-box superfamily protein1.4e-1535.66Show/hide
Query:  VSTLFIVFVCTRLVCARIHL---NASRRS--FLVASRSDLSGLERG--QHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHS
        V  L  + +C  + C  +H     A RRS  F+++         RG    G++   +  FP   YS E      + +C +CL+D+ S + LR+LP C H 
Subjt:  VSTLFIVFVCTRLVCARIHL---NASRRS--FLVASRSDLSGLERG--QHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHS

Query:  FHVTCIDIWLHRHSTCPVCRTSLREVPDK
        FHV CID WL +H TCP CR  L E   K
Subjt:  FHVTCIDIWLHRHSTCPVCRTSLREVPDK

AT2G34990.1 RING/U-box superfamily protein4.9e-1630.99Show/hide
Query:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFL---VASRSDLSGLERGQHGVEPFVVANFPTKKYSD--EYFSSMRNAQCTVCLADYNSEDLLRI
        LV+T+I F +  + +  VC R    + +   S   F    V SR+ ++ +     G++  ++ +FPT  YS+  E    +   +C VC+ ++   + LR+
Subjt:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFL---VASRSDLSGLERGQHGVEPFVVANFPTKKYSD--EYFSSMRNAQCTVCLADYNSEDLLRI

Query:  LPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQP
        +P C H FH  C+ +WL  HSTCP+CR  L   P ++  L P
Subjt:  LPYCGHSFHVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQP

AT4G40070.1 RING/U-box superfamily protein1.4e-1534.09Show/hide
Query:  TVIGFTVSTLFIVFVCTRLV--CARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSM--RNAQCTVCLADYNSEDLLRILPYC
        TV    V+  F+  + +  +  CAR + ++S R F   +R++     RG  G++  VV +FP   YS    S +  ++ +C +CL +    + +R+LP C
Subjt:  TVIGFTVSTLFIVFVCTRLV--CARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSM--RNAQCTVCLADYNSEDLLRILPYC

Query:  GHSFHVTCIDIWLHRHSTCPVCRTSLREVPDK
         H FH+ CID WL+ H+TCPVCR++L    +K
Subjt:  GHSFHVTCIDIWLHRHSTCPVCRTSLREVPDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCTTCTGGTGTAAATTTGGTGATGACTGTGATTGGATTCACTGTGAGTACTTTGTTCATCGTGTTCGTTTGCACGAGGCTTGTTTGTGCTCGGATTCATCTCAA
TGCTTCAAGGCGCTCCTTCCTTGTCGCTTCTAGATCCGATCTCAGTGGGCTCGAACGGGGACAACACGGTGTAGAGCCTTTTGTTGTAGCTAACTTTCCAACTAAGAAGT
ATAGTGATGAATACTTCTCATCCATGAGAAATGCTCAATGCACAGTTTGCTTAGCAGATTATAACAGTGAAGACTTATTGCGCATTCTCCCCTACTGTGGACACTCCTTC
CATGTGACCTGCATAGACATATGGCTGCATCGGCACTCAACATGCCCAGTTTGTCGTACATCGTTACGTGAGGTCCCAGACAAGAAACGAACATTACAACCCTTGTTTAG
TTCAGCCATTCGCTCTCATTACAACCTCAACTCAGACGTCTGTGCTTATCCCTGCCATGGGTTCCCATTAAGCGACCATGAAAACACTGGGTTGGAACCAATCCAAGAGA
ACCAGGCTAACGGAGCAGCGGATCCGATAGAGAATGCTTCCTCGTTTACCGAAGGTAACCTGAATAGTAAAGGCTCAAGAAACAAAAATGTAGTAAGTCCATCAAATGCT
TGA
mRNA sequenceShow/hide mRNA sequence
ATTAAACTTCCCTTTTTTTTTTTTTTTTTTTTTTGCGTTCCCGATTTGTGTTCGAGCGTGTTCTTGAAATGATTCATCATGGGAATCGGTTTTCGTTCTAGTTTTGGCGT
GAATGCGATTAGAATCACTCCTTTCGTGGTTGAATTTGCTGAAGTTCGCGCGATTTTAGTTCGCAATAGAAGAGAAATTTGAGGTTTCGATTAGTGCAGAAAGGGAGATT
TGATTTGAGGAGAAGAGGTTATTTGGAGAATGATGTCTTCTGGTGTAAATTTGGTGATGACTGTGATTGGATTCACTGTGAGTACTTTGTTCATCGTGTTCGTTTGCACG
AGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCAAGGCGCTCCTTCCTTGTCGCTTCTAGATCCGATCTCAGTGGGCTCGAACGGGGACAACACGGTGTAGAGCCTTT
TGTTGTAGCTAACTTTCCAACTAAGAAGTATAGTGATGAATACTTCTCATCCATGAGAAATGCTCAATGCACAGTTTGCTTAGCAGATTATAACAGTGAAGACTTATTGC
GCATTCTCCCCTACTGTGGACACTCCTTCCATGTGACCTGCATAGACATATGGCTGCATCGGCACTCAACATGCCCAGTTTGTCGTACATCGTTACGTGAGGTCCCAGAC
AAGAAACGAACATTACAACCCTTGTTTAGTTCAGCCATTCGCTCTCATTACAACCTCAACTCAGACGTCTGTGCTTATCCCTGCCATGGGTTCCCATTAAGCGACCATGA
AAACACTGGGTTGGAACCAATCCAAGAGAACCAGGCTAACGGAGCAGCGGATCCGATAGAGAATGCTTCCTCGTTTACCGAAGGTAACCTGAATAGTAAAGGCTCAAGAA
ACAAAAATGTAGTAAGTCCATCAAATGCTTGAGAGTTTCTCTGTGGTTGGTTTGTGATAGGAGTTTGGATTGGTAAGAGAGCTGTGTCCCAAAAGTAGATGTCCTTAGCT
ATCTATCTGCTTAGAAAGGTTGTCTGTCTTGTTATTTACCACTGTACATAAGTCTTGCTTGTAGTGAACTAATCTGTTGCTGGTTTGAGCAGTTTTGTTACTTTTCTTCT
GCACAACATTAAGTACACCATGAACCCCCTTTTATACGTTACGTCTAC
Protein sequenceShow/hide protein sequence
MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHGVEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSF
HVTCIDIWLHRHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEPIQENQANGAADPIENASSFTEGNLNSKGSRNKNVVSPSNA